RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 CAMK2BQ13554 666 aa16.35■□□□□ 0.21
MCF2-207ENST00000483690 OCEL1Q9H607 264 aa16.35■□□□□ 0.21
MCF2-207ENST00000483690 IRX5P78411 483 aaPredicted RBP16.34■□□□□ 0.21
MCF2-207ENST00000483690 PPP1R15BQ5SWA1 713 aa16.34■□□□□ 0.21
MCF2-207ENST00000483690 ARIH1Q9Y4X5 557 aaPredicted RBP16.34■□□□□ 0.21
MCF2-207ENST00000483690 TESPA1A2RU30 521 aaPredicted RBP16.33■□□□□ 0.2
MCF2-207ENST00000483690 G3V3G9 751 aa16.3■□□□□ 0.2
MCF2-207ENST00000483690 TMC2Q8TDI7 906 aa16.29■□□□□ 0.2
MCF2-207ENST00000483690 PLCG2P16885 1265 aa16.28■□□□□ 0.2
MCF2-207ENST00000483690 BOLA1Q9Y3E2 137 aa16.28■□□□□ 0.2
MCF2-207ENST00000483690 SMYD5Q6GMV2 418 aa16.26■□□□□ 0.19
MCF2-207ENST00000483690 DSG2Q14126 1118 aa16.24■□□□□ 0.19
MCF2-207ENST00000483690 TMEM121BQ9BXQ6 578 aaPredicted RBP16.24■□□□□ 0.19
MCF2-207ENST00000483690 DCBLD2Q96PD2 775 aa16.23■□□□□ 0.19
MCF2-207ENST00000483690 FOXK1P85037 733 aa16.2■□□□□ 0.18
MCF2-207ENST00000483690 L3MBTL3Q96JM7 780 aaPredicted RBP16.2■□□□□ 0.18
MCF2-207ENST00000483690 SEC24BO95487 1268 aa16.19■□□□□ 0.18
MCF2-207ENST00000483690 ZC3H15Q8WU90 426 aaKnown RBP16.16■□□□□ 0.18
MCF2-207ENST00000483690 C2orf72A6NCS6 295 aa16.15■□□□□ 0.18
MCF2-207ENST00000483690 EMILIN3Q9NT22 766 aa16.15■□□□□ 0.18
MCF2-207ENST00000483690 DPYSL4O14531 572 aa16.14■□□□□ 0.17
MCF2-207ENST00000483690 PLPP6Q8IY26 295 aa16.13■□□□□ 0.17
MCF2-207ENST00000483690 PELP1Q8IZL8 1130 aaKnown RBP16.13■□□□□ 0.17
MCF2-207ENST00000483690 KIF3CO14782 793 aa16.11■□□□□ 0.17
MCF2-207ENST00000483690 SLC39A7Q92504 469 aa16.11■□□□□ 0.17
MCF2-207ENST00000483690 SPDYE16A6NNV3 312 aaPredicted RBP16.1■□□□□ 0.17
MCF2-207ENST00000483690 COLQQ9Y215 455 aaPredicted RBP16.1■□□□□ 0.17
MCF2-207ENST00000483690 C7P10643 843 aa16.07■□□□□ 0.16
MCF2-207ENST00000483690 MLLT3P42568 568 aaPredicted RBP16.07■□□□□ 0.16
MCF2-207ENST00000483690 PDIA6Q15084 440 aa16.07■□□□□ 0.16
MCF2-207ENST00000483690 POTEIP0CG38 1075 aa16.04■□□□□ 0.16
MCF2-207ENST00000483690 MAP3K9P80192 1104 aa16■□□□□ 0.15
MCF2-207ENST00000483690 RBM26Q5T8P6 1007 aaKnown RBP16■□□□□ 0.15
MCF2-207ENST00000483690 TMEM92Q6UXU6 159 aa16■□□□□ 0.15
MCF2-207ENST00000483690 METRNQ9UJH8 293 aa16■□□□□ 0.15
MCF2-207ENST00000483690 ZMYND10O75800 440 aa15.99■□□□□ 0.15
MCF2-207ENST00000483690 GPIHBP1Q8IV16 184 aa15.98■□□□□ 0.15
MCF2-207ENST00000483690 POTEFA5A3E0 1075 aa15.97■□□□□ 0.15
MCF2-207ENST00000483690 SLC24A3Q9HC58 644 aa15.97■□□□□ 0.15
MCF2-207ENST00000483690 C3orf67Q6ZVT6 689 aa15.95■□□□□ 0.14
MCF2-207ENST00000483690 UPF1Q92900 1129 aaKnown RBP eCLIP15.95■□□□□ 0.14
MCF2-207ENST00000483690 BARGINQ6ZT62 677 aa15.91■□□□□ 0.14
MCF2-207ENST00000483690 OXER1Q8TDS5 423 aa15.9■□□□□ 0.14
MCF2-207ENST00000483690 GRXCR2A6NFK2 248 aa15.87■□□□□ 0.13
MCF2-207ENST00000483690 TBC1D12O60347 775 aa15.87■□□□□ 0.13
MCF2-207ENST00000483690 BRPF1P55201 1214 aaPredicted RBP15.87■□□□□ 0.13
MCF2-207ENST00000483690 TMEM132AQ24JP5 1023 aa15.87■□□□□ 0.13
MCF2-207ENST00000483690 NEUROD2Q15784 382 aa15.83■□□□□ 0.12
MCF2-207ENST00000483690 KRI1Q8N9T8 703 aaKnown RBP15.83■□□□□ 0.12
MCF2-207ENST00000483690 ZNF316A6NFI3 1004 aaPredicted RBP15.81■□□□□ 0.12
MCF2-207ENST00000483690 PTGER2P43116 358 aa15.8■□□□□ 0.12
MCF2-207ENST00000483690 EVI5O60447 810 aa15.79■□□□□ 0.12
MCF2-207ENST00000483690 AK7Q96M32 723 aa15.79■□□□□ 0.12
MCF2-207ENST00000483690 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.79■□□□□ 0.12
MCF2-207ENST00000483690 LHX8Q68G74 356 aa15.78■□□□□ 0.12
MCF2-207ENST00000483690 PTCD2Q8WV60 388 aaKnown RBP15.78■□□□□ 0.12
MCF2-207ENST00000483690 DDX12PQ92771 950 aa15.78■□□□□ 0.12
MCF2-207ENST00000483690 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
MCF2-207ENST00000483690 SLC34A2O95436 690 aa15.75■□□□□ 0.11
MCF2-207ENST00000483690 OSBPP22059 807 aa15.75■□□□□ 0.11
MCF2-207ENST00000483690 GPR37O15354 613 aa15.73■□□□□ 0.11
MCF2-207ENST00000483690 GTF3C3Q9Y5Q9 886 aa15.71■□□□□ 0.11
MCF2-207ENST00000483690 ANO8Q9HCE9 1232 aaPredicted RBP15.66■□□□□ 0.1
MCF2-207ENST00000483690 FCHSD2O94868 740 aa15.65■□□□□ 0.1
MCF2-207ENST00000483690 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
MCF2-207ENST00000483690 TRIM66O15016 1216 aa15.62■□□□□ 0.09
MCF2-207ENST00000483690 GNPATO15228 680 aa15.62■□□□□ 0.09
MCF2-207ENST00000483690 HIC1Q14526 733 aa15.62■□□□□ 0.09
MCF2-207ENST00000483690 PCDHGA4Q9Y5G9 962 aa15.62■□□□□ 0.09
MCF2-207ENST00000483690 MAP2K5Q13163 448 aa15.61■□□□□ 0.09
MCF2-207ENST00000483690 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
MCF2-207ENST00000483690 PHF14O94880 888 aa15.59■□□□□ 0.09
MCF2-207ENST00000483690 EPAS1Q99814 870 aa15.59■□□□□ 0.09
MCF2-207ENST00000483690 PDE4DQ08499 809 aa15.58■□□□□ 0.08
MCF2-207ENST00000483690 GPBP1L1Q9HC44 474 aaPredicted RBP15.58■□□□□ 0.08
MCF2-207ENST00000483690 PTGDRQ13258 359 aa15.56■□□□□ 0.08
MCF2-207ENST00000483690 CCDC102AQ96A19 550 aa15.56■□□□□ 0.08
MCF2-207ENST00000483690 IRF6O14896 467 aa15.55■□□□□ 0.08
MCF2-207ENST00000483690 EN1Q05925 392 aaPredicted RBP15.55■□□□□ 0.08
MCF2-207ENST00000483690 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
MCF2-207ENST00000483690 MAP3K7O43318 606 aa15.53■□□□□ 0.08
MCF2-207ENST00000483690 KDM4CQ9H3R0 1056 aa15.53■□□□□ 0.08
MCF2-207ENST00000483690 POTEB2H3BUK9 544 aa15.52■□□□□ 0.08
MCF2-207ENST00000483690 FECHP22830 423 aa15.52■□□□□ 0.08
MCF2-207ENST00000483690 RBM33Q96EV2 1170 aaKnown RBP15.51■□□□□ 0.07
MCF2-207ENST00000483690 PCDHGA10Q9Y5H3 936 aa15.51■□□□□ 0.07
MCF2-207ENST00000483690 DOK7Q18PE1 504 aa15.5■□□□□ 0.07
MCF2-207ENST00000483690 TYW1BQ6NUM6 668 aa15.5■□□□□ 0.07
MCF2-207ENST00000483690 SLAIN1Q8ND83 568 aa15.5■□□□□ 0.07
MCF2-207ENST00000483690 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
MCF2-207ENST00000483690 POTEJP0CG39 1038 aa15.48■□□□□ 0.07
MCF2-207ENST00000483690 ERICH6Q7L0X2 663 aa15.48■□□□□ 0.07
MCF2-207ENST00000483690 CDHR5Q9HBB8 845 aa15.48■□□□□ 0.07
MCF2-207ENST00000483690 KDM4FA0A1W2PPD8 638 aa15.47■□□□□ 0.07
MCF2-207ENST00000483690 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
MCF2-207ENST00000483690 TIMELESSQ9UNS1 1208 aa15.47■□□□□ 0.07
MCF2-207ENST00000483690 RIMBP2O15034 1052 aa15.46■□□□□ 0.07
MCF2-207ENST00000483690 SCUBE2Q9NQ36 999 aa15.46■□□□□ 0.07
MCF2-207ENST00000483690 AMHR2Q16671 573 aa15.45■□□□□ 0.06
MCF2-207ENST00000483690 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms