RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 NLRP6P59044 892 aa9.95□□□□□ -0.82
LAPTM4A-202ENST00000483117 MICALL2Q8IY33 904 aa9.95□□□□□ -0.82
LAPTM4A-202ENST00000483117 FBXO22Q8NEZ5 403 aa9.95□□□□□ -0.82
LAPTM4A-202ENST00000483117 MFRPQ9BY79 579 aa9.95□□□□□ -0.82
LAPTM4A-202ENST00000483117 TMEM92Q6UXU6 159 aa9.89□□□□□ -0.83
LAPTM4A-202ENST00000483117 PLA2G2EQ9NZK7 142 aa9.86□□□□□ -0.83
LAPTM4A-202ENST00000483117 CHGAP10645 457 aaKnown RBP9.85□□□□□ -0.83
LAPTM4A-202ENST00000483117 HOXB3P14651 431 aaPredicted RBP9.85□□□□□ -0.83
LAPTM4A-202ENST00000483117 HS6ST3Q8IZP7 471 aa9.85□□□□□ -0.83
LAPTM4A-202ENST00000483117 PTGER2P43116 358 aa9.83□□□□□ -0.84
LAPTM4A-202ENST00000483117 ERBB3P21860 1342 aa9.82□□□□□ -0.84
LAPTM4A-202ENST00000483117 PPP1R37O75864 691 aa9.81□□□□□ -0.84
LAPTM4A-202ENST00000483117 DOK7Q18PE1 504 aa9.78□□□□□ -0.84
LAPTM4A-202ENST00000483117 HOXB1P14653 301 aaPredicted RBP9.77□□□□□ -0.85
LAPTM4A-202ENST00000483117 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
LAPTM4A-202ENST00000483117 NKX1-1Q15270 411 aaPredicted RBP9.75□□□□□ -0.85
LAPTM4A-202ENST00000483117 C2orf72A6NCS6 295 aa9.73□□□□□ -0.85
LAPTM4A-202ENST00000483117 DCAF8L2P0C7V8 631 aa9.73□□□□□ -0.85
LAPTM4A-202ENST00000483117 KIF3CO14782 793 aa9.72□□□□□ -0.85
LAPTM4A-202ENST00000483117 DNAJC5Q9H3Z4 198 aa9.72□□□□□ -0.85
LAPTM4A-202ENST00000483117 RIMBP2O15034 1052 aa9.71□□□□□ -0.86
LAPTM4A-202ENST00000483117 VARS2Q5ST30 1063 aaKnown RBP9.7□□□□□ -0.86
LAPTM4A-202ENST00000483117 ZNF687Q8N1G0 1237 aa9.68□□□□□ -0.86
LAPTM4A-202ENST00000483117 TMC2Q8TDI7 906 aa9.68□□□□□ -0.86
LAPTM4A-202ENST00000483117 GPR153Q6NV75 609 aa9.67□□□□□ -0.86
LAPTM4A-202ENST00000483117 ARSIQ5FYB1 569 aa9.66□□□□□ -0.86
LAPTM4A-202ENST00000483117 ZSWIM6Q9HCJ5 1215 aa9.66□□□□□ -0.86
LAPTM4A-202ENST00000483117 KHSRPQ92945 711 aaKnown RBP eCLIP9.65□□□□□ -0.86
LAPTM4A-202ENST00000483117 IRX2Q9BZI1 471 aaPredicted RBP9.65□□□□□ -0.86
LAPTM4A-202ENST00000483117 ANKRD13DQ6ZTN6 518 aa9.62□□□□□ -0.87
LAPTM4A-202ENST00000483117 GTPBP6O43824 516 aaPredicted RBP9.61□□□□□ -0.87
LAPTM4A-202ENST00000483117 RYDENQ9NUL5 291 aaKnown RBP9.61□□□□□ -0.87
LAPTM4A-202ENST00000483117 GPHNQ9NQX3 736 aaPredicted RBP9.58□□□□□ -0.88
LAPTM4A-202ENST00000483117 HCSTQ9UBK5 93 aa9.58□□□□□ -0.88
LAPTM4A-202ENST00000483117 FOXK1P85037 733 aa9.57□□□□□ -0.88
LAPTM4A-202ENST00000483117 PLPP6Q8IY26 295 aa9.57□□□□□ -0.88
LAPTM4A-202ENST00000483117 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
LAPTM4A-202ENST00000483117 SLC34A2O95436 690 aa9.56□□□□□ -0.88
LAPTM4A-202ENST00000483117 NUDT7P0C024 238 aa9.56□□□□□ -0.88
LAPTM4A-202ENST00000483117 DSG2Q14126 1118 aa9.56□□□□□ -0.88
LAPTM4A-202ENST00000483117 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
LAPTM4A-202ENST00000483117 AMER1Q5JTC6 1135 aaPredicted RBP9.55□□□□□ -0.88
LAPTM4A-202ENST00000483117 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
LAPTM4A-202ENST00000483117 RGS20O76081 388 aa9.52□□□□□ -0.89
LAPTM4A-202ENST00000483117 CRISPLD2Q9H0B8 497 aa9.52□□□□□ -0.89
LAPTM4A-202ENST00000483117 NCKAP5LQ9HCH0 1330 aa9.51□□□□□ -0.89
LAPTM4A-202ENST00000483117 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
LAPTM4A-202ENST00000483117 PTCD2Q8WV60 388 aaKnown RBP9.49□□□□□ -0.89
LAPTM4A-202ENST00000483117 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
LAPTM4A-202ENST00000483117 PDE4AP27815 886 aa9.46□□□□□ -0.9
LAPTM4A-202ENST00000483117 BBXQ8WY36 941 aaPredicted RBP9.46□□□□□ -0.9
LAPTM4A-202ENST00000483117 KDM4FA0A1W2PPD8 638 aa9.45□□□□□ -0.9
LAPTM4A-202ENST00000483117 LSM11P83369 360 aaKnown RBP eCLIP9.45□□□□□ -0.9
LAPTM4A-202ENST00000483117 CADPS2Q86UW7 1296 aa9.45□□□□□ -0.9
LAPTM4A-202ENST00000483117 UPF1Q92900 1129 aaKnown RBP eCLIP9.45□□□□□ -0.9
LAPTM4A-202ENST00000483117 LARP6Q9BRS8 491 aaKnown RBP9.44□□□□□ -0.9
LAPTM4A-202ENST00000483117 TBC1D12O60347 775 aa9.42□□□□□ -0.9
LAPTM4A-202ENST00000483117 POTEEQ6S8J3 1075 aa9.42□□□□□ -0.9
LAPTM4A-202ENST00000483117 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
LAPTM4A-202ENST00000483117 DDX27Q96GQ7 796 aaKnown RBP9.41□□□□□ -0.9
LAPTM4A-202ENST00000483117 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.9
LAPTM4A-202ENST00000483117 MFSD10Q14728 455 aa9.39□□□□□ -0.91
LAPTM4A-202ENST00000483117 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
LAPTM4A-202ENST00000483117 Q6ZNB5 142 aa9.36□□□□□ -0.91
LAPTM4A-202ENST00000483117 PBX2P40425 430 aa9.35□□□□□ -0.91
LAPTM4A-202ENST00000483117 SPRYD3Q8NCJ5 442 aa9.35□□□□□ -0.91
LAPTM4A-202ENST00000483117 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.35□□□□□ -0.91
LAPTM4A-202ENST00000483117 PPP4R3BQ5MIZ7 849 aa9.33□□□□□ -0.92
LAPTM4A-202ENST00000483117 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
LAPTM4A-202ENST00000483117 EMILIN3Q9NT22 766 aa9.33□□□□□ -0.92
LAPTM4A-202ENST00000483117 PSEN2P49810 448 aa9.32□□□□□ -0.92
LAPTM4A-202ENST00000483117 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
LAPTM4A-202ENST00000483117 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
LAPTM4A-202ENST00000483117 EVI5O60447 810 aa9.31□□□□□ -0.92
LAPTM4A-202ENST00000483117 MAP3K9P80192 1104 aa9.3□□□□□ -0.92
LAPTM4A-202ENST00000483117 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
LAPTM4A-202ENST00000483117 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
LAPTM4A-202ENST00000483117 ANO8Q9HCE9 1232 aaPredicted RBP9.28□□□□□ -0.92
LAPTM4A-202ENST00000483117 FOSBP53539 338 aa9.26□□□□□ -0.93
LAPTM4A-202ENST00000483117 KCNK17Q96T54 332 aa9.26□□□□□ -0.93
LAPTM4A-202ENST00000483117 CAMK2BQ13554 666 aa9.25□□□□□ -0.93
LAPTM4A-202ENST00000483117 ADGRD1Q6QNK2 874 aa9.25□□□□□ -0.93
LAPTM4A-202ENST00000483117 IFFO2Q5TF58 517 aa9.24□□□□□ -0.93
LAPTM4A-202ENST00000483117 DPYSL4O14531 572 aa9.23□□□□□ -0.93
LAPTM4A-202ENST00000483117 JPH4Q96JJ6 628 aa9.23□□□□□ -0.93
LAPTM4A-202ENST00000483117 BCL2L12Q9HB09 334 aa9.22□□□□□ -0.93
LAPTM4A-202ENST00000483117 A0A0G2JS52 829 aa9.21□□□□□ -0.94
LAPTM4A-202ENST00000483117 ZDHHC16Q969W1 377 aa9.21□□□□□ -0.94
LAPTM4A-202ENST00000483117 KCNH8Q96L42 1107 aa9.21□□□□□ -0.94
LAPTM4A-202ENST00000483117 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
LAPTM4A-202ENST00000483117 TK2O00142 265 aa9.2□□□□□ -0.94
LAPTM4A-202ENST00000483117 HRO43593 1189 aa9.19□□□□□ -0.94
LAPTM4A-202ENST00000483117 PTPREP23469 700 aa9.19□□□□□ -0.94
LAPTM4A-202ENST00000483117 PCDHGA10Q9Y5H3 936 aa9.19□□□□□ -0.94
LAPTM4A-202ENST00000483117 LCE2BO14633 110 aa9.16□□□□□ -0.94
LAPTM4A-202ENST00000483117 VPS9D1Q9Y2B5 631 aa9.16□□□□□ -0.94
LAPTM4A-202ENST00000483117 PHF14O94880 888 aa9.14□□□□□ -0.95
LAPTM4A-202ENST00000483117 WDR70Q9NW82 654 aa9.14□□□□□ -0.95
LAPTM4A-202ENST00000483117 LOC100996750A0A140TA64 210 aa9.13□□□□□ -0.95
LAPTM4A-202ENST00000483117 E2F4Q16254 413 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms