RNA–Protein interactions for RNA: ENST00000482479.1

TFRC-213, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-213ENST00000482479 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
TFRC-213ENST00000482479 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
TFRC-213ENST00000482479 KIF3CO14782 793 aa12.33□□□□□ -0.44
TFRC-213ENST00000482479 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
TFRC-213ENST00000482479 C2orf72A6NCS6 295 aa12.3□□□□□ -0.44
TFRC-213ENST00000482479 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
TFRC-213ENST00000482479 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
TFRC-213ENST00000482479 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
TFRC-213ENST00000482479 GTPBP6O43824 516 aaPredicted RBP12.26□□□□□ -0.45
TFRC-213ENST00000482479 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
TFRC-213ENST00000482479 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
TFRC-213ENST00000482479 EMP3P54852 163 aa12.25□□□□□ -0.45
TFRC-213ENST00000482479 ZSWIM6Q9HCJ5 1215 aa12.24□□□□□ -0.45
TFRC-213ENST00000482479 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
TFRC-213ENST00000482479 GPR153Q6NV75 609 aa12.19□□□□□ -0.46
TFRC-213ENST00000482479 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
TFRC-213ENST00000482479 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
TFRC-213ENST00000482479 BBXQ8WY36 941 aaPredicted RBP12.16□□□□□ -0.46
TFRC-213ENST00000482479 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
TFRC-213ENST00000482479 SLC34A2O95436 690 aa12.15□□□□□ -0.46
TFRC-213ENST00000482479 FOXK1P85037 733 aa12.15□□□□□ -0.46
TFRC-213ENST00000482479 POTEB3A0JP26 581 aa12.14□□□□□ -0.47
TFRC-213ENST00000482479 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
TFRC-213ENST00000482479 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
TFRC-213ENST00000482479 CRISPLD2Q9H0B8 497 aa12.12□□□□□ -0.47
TFRC-213ENST00000482479 DSG2Q14126 1118 aa12.11□□□□□ -0.47
TFRC-213ENST00000482479 PLPP6Q8IY26 295 aa12.11□□□□□ -0.47
TFRC-213ENST00000482479 ERBB3P21860 1342 aa12.1□□□□□ -0.47
TFRC-213ENST00000482479 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
TFRC-213ENST00000482479 NCKAP5LQ9HCH0 1330 aa12.09□□□□□ -0.47
TFRC-213ENST00000482479 PCDHGA4Q9Y5G9 962 aa12.08□□□□□ -0.48
TFRC-213ENST00000482479 PDE4AP27815 886 aa12.06□□□□□ -0.48
TFRC-213ENST00000482479 VARS2Q5ST30 1063 aaKnown RBP12.05□□□□□ -0.48
TFRC-213ENST00000482479 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
TFRC-213ENST00000482479 NUDT7P0C024 238 aa12.03□□□□□ -0.48
TFRC-213ENST00000482479 PPP1R15BQ5SWA1 713 aa12.03□□□□□ -0.48
TFRC-213ENST00000482479 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
TFRC-213ENST00000482479 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.49
TFRC-213ENST00000482479 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
TFRC-213ENST00000482479 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
TFRC-213ENST00000482479 CADPS2Q86UW7 1296 aa12.01□□□□□ -0.49
TFRC-213ENST00000482479 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
TFRC-213ENST00000482479 LARP6Q9BRS8 491 aaKnown RBP11.99□□□□□ -0.49
TFRC-213ENST00000482479 MFSD10Q14728 455 aa11.98□□□□□ -0.49
TFRC-213ENST00000482479 ZNF687Q8N1G0 1237 aa11.98□□□□□ -0.49
TFRC-213ENST00000482479 DDX27Q96GQ7 796 aaKnown RBP11.98□□□□□ -0.49
TFRC-213ENST00000482479 KDM4FA0A1W2PPD8 638 aa11.97□□□□□ -0.49
TFRC-213ENST00000482479 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
TFRC-213ENST00000482479 TBC1D12O60347 775 aa11.96□□□□□ -0.49
TFRC-213ENST00000482479 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
TFRC-213ENST00000482479 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
TFRC-213ENST00000482479 SPNS2Q8IVW8 549 aa11.92□□□□□ -0.5
TFRC-213ENST00000482479 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
TFRC-213ENST00000482479 UPF1Q92900 1129 aaKnown RBP eCLIP11.91□□□□□ -0.5
TFRC-213ENST00000482479 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
TFRC-213ENST00000482479 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
TFRC-213ENST00000482479 PBX2P40425 430 aa11.83□□□□□ -0.52
TFRC-213ENST00000482479 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
TFRC-213ENST00000482479 CAMK2BQ13554 666 aa11.82□□□□□ -0.52
TFRC-213ENST00000482479 POTEEQ6S8J3 1075 aa11.82□□□□□ -0.52
TFRC-213ENST00000482479 MAP3K9P80192 1104 aa11.8□□□□□ -0.52
TFRC-213ENST00000482479 PPP4R3BQ5MIZ7 849 aa11.8□□□□□ -0.52
TFRC-213ENST00000482479 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
TFRC-213ENST00000482479 EVI5O60447 810 aa11.79□□□□□ -0.52
TFRC-213ENST00000482479 LSM11P83369 360 aaKnown RBP eCLIP11.78□□□□□ -0.52
TFRC-213ENST00000482479 AXIN2Q9Y2T1 843 aa11.77□□□□□ -0.53
TFRC-213ENST00000482479 ARHGAP33O14559 1287 aa11.75□□□□□ -0.53
TFRC-213ENST00000482479 ANKRD13DQ6ZTN6 518 aa11.75□□□□□ -0.53
TFRC-213ENST00000482479 ZNF454Q8N9F8 522 aa11.74□□□□□ -0.53
TFRC-213ENST00000482479 FOSBP53539 338 aa11.73□□□□□ -0.53
TFRC-213ENST00000482479 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
TFRC-213ENST00000482479 DPYSL4O14531 572 aa11.71□□□□□ -0.53
TFRC-213ENST00000482479 PTGER2P43116 358 aa11.69□□□□□ -0.54
TFRC-213ENST00000482479 PSEN2P49810 448 aa11.69□□□□□ -0.54
TFRC-213ENST00000482479 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
TFRC-213ENST00000482479 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
TFRC-213ENST00000482479 E2F4Q16254 413 aa11.67□□□□□ -0.54
TFRC-213ENST00000482479 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
TFRC-213ENST00000482479 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
TFRC-213ENST00000482479 ZDHHC16Q969W1 377 aa11.66□□□□□ -0.54
TFRC-213ENST00000482479 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
TFRC-213ENST00000482479 MYT1LQ9UL68 1186 aa11.66□□□□□ -0.54
TFRC-213ENST00000482479 ADGRD1Q6QNK2 874 aa11.65□□□□□ -0.54
TFRC-213ENST00000482479 KCNH8Q96L42 1107 aa11.65□□□□□ -0.54
TFRC-213ENST00000482479 TK2O00142 265 aa11.64□□□□□ -0.55
TFRC-213ENST00000482479 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
TFRC-213ENST00000482479 PCDHGA10Q9Y5H3 936 aa11.64□□□□□ -0.55
TFRC-213ENST00000482479 ADAM33Q9BZ11 813 aa11.63□□□□□ -0.55
TFRC-213ENST00000482479 ARIH1Q9Y4X5 557 aaPredicted RBP11.63□□□□□ -0.55
TFRC-213ENST00000482479 PHF14O94880 888 aa11.62□□□□□ -0.55
TFRC-213ENST00000482479 PTPREP23469 700 aa11.62□□□□□ -0.55
TFRC-213ENST00000482479 PDIA6Q15084 440 aa11.62□□□□□ -0.55
TFRC-213ENST00000482479 HRO43593 1189 aa11.59□□□□□ -0.55
TFRC-213ENST00000482479 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
TFRC-213ENST00000482479 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
TFRC-213ENST00000482479 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
TFRC-213ENST00000482479 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
TFRC-213ENST00000482479 EPAS1Q99814 870 aa11.57□□□□□ -0.56
TFRC-213ENST00000482479 SLC4A5Q9BY07 1137 aa11.57□□□□□ -0.56
TFRC-213ENST00000482479 VPS9D1Q9Y2B5 631 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms