RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 PLCH2O75038 1416 aa18.18■□□□□ 0.5
SNRNP25-206ENST00000481947 MAP3K4Q9Y6R4 1608 aa18.17■□□□□ 0.5
SNRNP25-206ENST00000481947 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
SNRNP25-206ENST00000481947 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
SNRNP25-206ENST00000481947 PCGF6Q9BYE7 350 aa18.16■□□□□ 0.5
SNRNP25-206ENST00000481947 ARHGAP5Q13017 1502 aa18.16■□□□□ 0.5
SNRNP25-206ENST00000481947 SAMD9LQ8IVG5 1584 aa18.16■□□□□ 0.5
SNRNP25-206ENST00000481947 KIF13AQ9H1H9 1805 aa18.15■□□□□ 0.5
SNRNP25-206ENST00000481947 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
SNRNP25-206ENST00000481947 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
SNRNP25-206ENST00000481947 CD109Q6YHK3 1445 aa18.12■□□□□ 0.49
SNRNP25-206ENST00000481947 DNMT1P26358 1616 aaKnown RBP18.11■□□□□ 0.49
SNRNP25-206ENST00000481947 CFAP74Q9C0B2 1584 aa18.09■□□□□ 0.49
SNRNP25-206ENST00000481947 FANCAO15360 1455 aa18.08■□□□□ 0.49
SNRNP25-206ENST00000481947 ZNF777Q9ULD5 760 aaPredicted RBP18.08■□□□□ 0.48
SNRNP25-206ENST00000481947 CROCC2H7BZ55 1655 aa18.08■□□□□ 0.48
SNRNP25-206ENST00000481947 PPRC1Q5VV67 1664 aaKnown RBP18.08■□□□□ 0.48
SNRNP25-206ENST00000481947 ARHGEF5Q12774 1597 aa18.08■□□□□ 0.48
SNRNP25-206ENST00000481947 ABCC1P33527 1531 aa18.08■□□□□ 0.48
SNRNP25-206ENST00000481947 PLEKHH2Q8IVE3 1493 aa18.07■□□□□ 0.48
SNRNP25-206ENST00000481947 FAM69CQ0P6D2 419 aa18.07■□□□□ 0.48
SNRNP25-206ENST00000481947 EFCAB2Q5VUJ9 269 aa18.07■□□□□ 0.48
SNRNP25-206ENST00000481947 SYCP2Q9BX26 1530 aa18.06■□□□□ 0.48
SNRNP25-206ENST00000481947 MBD5Q9P267 1494 aa18.06■□□□□ 0.48
SNRNP25-206ENST00000481947 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
SNRNP25-206ENST00000481947 DAPK1P53355 1430 aa18.05■□□□□ 0.48
SNRNP25-206ENST00000481947 PTPRKQ15262 1439 aa18.05■□□□□ 0.48
SNRNP25-206ENST00000481947 ARHGEF12Q9NZN5 1544 aa18.04■□□□□ 0.48
SNRNP25-206ENST00000481947 ABCC5O15440 1437 aa18.04■□□□□ 0.48
SNRNP25-206ENST00000481947 ITGAEP38570 1179 aa18.03■□□□□ 0.48
SNRNP25-206ENST00000481947 TSPOAP1O95153 1857 aa18.03■□□□□ 0.48
SNRNP25-206ENST00000481947 NEO1Q92859 1461 aa18.02■□□□□ 0.48
SNRNP25-206ENST00000481947 AKNAQ7Z591 1439 aa18.02■□□□□ 0.48
SNRNP25-206ENST00000481947 HNRNPMP52272 730 aaKnown RBP eCLIP18■□□□□ 0.47
SNRNP25-206ENST00000481947 ADGRL1O94910 1474 aa18■□□□□ 0.47
SNRNP25-206ENST00000481947 CCDC141Q6ZP82 1450 aa18■□□□□ 0.47
SNRNP25-206ENST00000481947 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
SNRNP25-206ENST00000481947 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
SNRNP25-206ENST00000481947 MAST1Q9Y2H9 1570 aa17.98■□□□□ 0.47
SNRNP25-206ENST00000481947 TEX14Q8IWB6 1497 aa17.97■□□□□ 0.47
SNRNP25-206ENST00000481947 RSPH4AQ5TD94 716 aa17.96■□□□□ 0.47
SNRNP25-206ENST00000481947 SCAPERQ9BY12 1400 aa17.96■□□□□ 0.47
SNRNP25-206ENST00000481947 TRAPPC8Q9Y2L5 1435 aa17.96■□□□□ 0.47
SNRNP25-206ENST00000481947 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
SNRNP25-206ENST00000481947 ROCK1Q13464 1354 aa17.94■□□□□ 0.46
SNRNP25-206ENST00000481947 GCC2Q8IWJ2 1684 aa17.94■□□□□ 0.46
SNRNP25-206ENST00000481947 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
SNRNP25-206ENST00000481947 HFM1A2PYH4 1435 aa17.92■□□□□ 0.46
SNRNP25-206ENST00000481947 CHIC2Q9UKJ5 165 aa17.92■□□□□ 0.46
SNRNP25-206ENST00000481947 RICTORQ6R327 1708 aa17.92■□□□□ 0.46
SNRNP25-206ENST00000481947 KDM5CP41229 1560 aa17.91■□□□□ 0.46
SNRNP25-206ENST00000481947 POGZQ7Z3K3 1410 aa17.91■□□□□ 0.46
SNRNP25-206ENST00000481947 INO80Q9ULG1 1556 aaPredicted RBP17.91■□□□□ 0.46
SNRNP25-206ENST00000481947 ZNF518AQ6AHZ1 1483 aa17.9■□□□□ 0.46
SNRNP25-206ENST00000481947 PLXNC1O60486 1568 aa17.9■□□□□ 0.46
SNRNP25-206ENST00000481947 NAIPQ13075 1403 aa17.89■□□□□ 0.46
SNRNP25-206ENST00000481947 NCOA1Q15788 1441 aa17.89■□□□□ 0.46
SNRNP25-206ENST00000481947 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.46
SNRNP25-206ENST00000481947 DENND4BO75064 1496 aaPredicted RBP17.89■□□□□ 0.45
SNRNP25-206ENST00000481947 ZFYVE16Q7Z3T8 1539 aa17.89■□□□□ 0.45
SNRNP25-206ENST00000481947 FRMPD1Q5SYB0 1578 aa17.89■□□□□ 0.45
SNRNP25-206ENST00000481947 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
SNRNP25-206ENST00000481947 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
SNRNP25-206ENST00000481947 AFAP1Q8N556 730 aa17.88■□□□□ 0.45
SNRNP25-206ENST00000481947 RTEL1-TNFRSF6BF6WH68 1400 aa17.88■□□□□ 0.45
SNRNP25-206ENST00000481947 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
SNRNP25-206ENST00000481947 ANKRD30AQ9BXX3 1397 aa17.87■□□□□ 0.45
SNRNP25-206ENST00000481947 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
SNRNP25-206ENST00000481947 ATP7AQ04656 1500 aa17.86■□□□□ 0.45
SNRNP25-206ENST00000481947 KIDINS220Q9ULH0 1771 aa17.86■□□□□ 0.45
SNRNP25-206ENST00000481947 HECW2Q9P2P5 1572 aa17.85■□□□□ 0.45
SNRNP25-206ENST00000481947 KDM6BO15054 1643 aa17.84■□□□□ 0.45
SNRNP25-206ENST00000481947 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
SNRNP25-206ENST00000481947 SPAG9O60271 1321 aaKnown RBP17.84■□□□□ 0.45
SNRNP25-206ENST00000481947 MLH3Q9UHC1 1453 aa17.83■□□□□ 0.45
SNRNP25-206ENST00000481947 ZMYM4Q5VZL5 1548 aa17.82■□□□□ 0.44
SNRNP25-206ENST00000481947 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
SNRNP25-206ENST00000481947 KIF15Q9NS87 1388 aa17.81■□□□□ 0.44
SNRNP25-206ENST00000481947 RAPGEF3O95398 923 aa17.81■□□□□ 0.44
SNRNP25-206ENST00000481947 HRCP23327 699 aa17.8■□□□□ 0.44
SNRNP25-206ENST00000481947 DUOX2Q9NRD8 1548 aa17.8■□□□□ 0.44
SNRNP25-206ENST00000481947 ABCA6Q8N139 1617 aa17.79■□□□□ 0.44
SNRNP25-206ENST00000481947 ANKRD50Q9ULJ7 1429 aa17.77■□□□□ 0.44
SNRNP25-206ENST00000481947 DIP2CQ9Y2E4 1556 aa17.76■□□□□ 0.43
SNRNP25-206ENST00000481947 MAGI2Q86UL8 1455 aa17.75■□□□□ 0.43
SNRNP25-206ENST00000481947 ERBINQ96RT1 1412 aa17.74■□□□□ 0.43
SNRNP25-206ENST00000481947 YEATS2Q9ULM3 1422 aa17.72■□□□□ 0.43
SNRNP25-206ENST00000481947 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
SNRNP25-206ENST00000481947 DHX29Q7Z478 1369 aaKnown RBP17.71■□□□□ 0.43
SNRNP25-206ENST00000481947 MYT1LQ9UL68 1186 aa17.71■□□□□ 0.43
SNRNP25-206ENST00000481947 UNC13BO14795 1591 aa17.7■□□□□ 0.42
SNRNP25-206ENST00000481947 A2MP01023 1474 aa17.7■□□□□ 0.42
SNRNP25-206ENST00000481947 BCORL1Q5H9F3 1711 aa17.69■□□□□ 0.42
SNRNP25-206ENST00000481947 ARHGEF40Q8TER5 1519 aa17.69■□□□□ 0.42
SNRNP25-206ENST00000481947 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
SNRNP25-206ENST00000481947 DHX57Q6P158 1386 aaKnown RBP17.68■□□□□ 0.42
SNRNP25-206ENST00000481947 REREQ9P2R6 1566 aa17.68■□□□□ 0.42
SNRNP25-206ENST00000481947 DEPDC5O75140 1603 aa17.68■□□□□ 0.42
SNRNP25-206ENST00000481947 KDM5DQ9BY66 1539 aa17.67■□□□□ 0.42
SNRNP25-206ENST00000481947 ATP10AO60312 1499 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms