RNA–Protein interactions for RNA: ENST00000480856.1

FNDC1-203, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 3

Gene FNDC1, Length 789 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-203ENST00000480856 RAPGEF3O95398 923 aa25.58■■□□□ 1.69
FNDC1-203ENST00000480856 ADGRL1O94910 1474 aa25.58■■□□□ 1.69
FNDC1-203ENST00000480856 SUPT6HQ7KZ85 1726 aaKnown RBP25.56■■□□□ 1.68
FNDC1-203ENST00000480856 DENND4BO75064 1496 aaPredicted RBP25.55■■□□□ 1.68
FNDC1-203ENST00000480856 CCNB3Q8WWL7 1395 aa25.55■■□□□ 1.68
FNDC1-203ENST00000480856 FRMPD1Q5SYB0 1578 aa25.53■■□□□ 1.68
FNDC1-203ENST00000480856 RICTORQ6R327 1708 aa25.53■■□□□ 1.68
FNDC1-203ENST00000480856 ZNF777Q9ULD5 760 aaPredicted RBP25.52■■□□□ 1.68
FNDC1-203ENST00000480856 SCAPERQ9BY12 1400 aa25.52■■□□□ 1.68
FNDC1-203ENST00000480856 LRRC9Q6ZRR7 1453 aa25.52■■□□□ 1.68
FNDC1-203ENST00000480856 MAP3K1Q13233 1512 aa25.5■■□□□ 1.67
FNDC1-203ENST00000480856 ITSN2Q9NZM3 1697 aa25.5■■□□□ 1.67
FNDC1-203ENST00000480856 GPATCH8Q9UKJ3 1502 aaKnown RBP25.5■■□□□ 1.67
FNDC1-203ENST00000480856 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
FNDC1-203ENST00000480856 KANK4Q5T7N3 995 aaPredicted RBP25.47■■□□□ 1.67
FNDC1-203ENST00000480856 CFDP1Q9UEE9 299 aaPredicted RBP25.46■■□□□ 1.67
FNDC1-203ENST00000480856 POGZQ7Z3K3 1410 aa25.45■■□□□ 1.66
FNDC1-203ENST00000480856 SAMD9LQ8IVG5 1584 aa25.44■■□□□ 1.66
FNDC1-203ENST00000480856 ABCC1P33527 1531 aa25.43■■□□□ 1.66
FNDC1-203ENST00000480856 MYT1LQ9UL68 1186 aa25.41■■□□□ 1.66
FNDC1-203ENST00000480856 ZMYM4Q5VZL5 1548 aa25.39■■□□□ 1.66
FNDC1-203ENST00000480856 ZNF518AQ6AHZ1 1483 aa25.39■■□□□ 1.65
FNDC1-203ENST00000480856 SYCP2Q9BX26 1530 aa25.38■■□□□ 1.65
FNDC1-203ENST00000480856 ARHGEF40Q8TER5 1519 aa25.37■■□□□ 1.65
FNDC1-203ENST00000480856 ZFYVE16Q7Z3T8 1539 aa25.37■■□□□ 1.65
FNDC1-203ENST00000480856 AFAP1Q8N556 730 aa25.36■■□□□ 1.65
FNDC1-203ENST00000480856 ARHGEF12Q9NZN5 1544 aa25.36■■□□□ 1.65
FNDC1-203ENST00000480856 TRAPPC8Q9Y2L5 1435 aa25.34■■□□□ 1.65
FNDC1-203ENST00000480856 HNRNPMP52272 730 aaKnown RBP eCLIP25.33■■□□□ 1.65
FNDC1-203ENST00000480856 YEATS2Q9ULM3 1422 aa25.33■■□□□ 1.65
FNDC1-203ENST00000480856 PLEKHH2Q8IVE3 1493 aa25.33■■□□□ 1.65
FNDC1-203ENST00000480856 ZNF644Q9H582 1327 aaPredicted RBP25.33■■□□□ 1.64
FNDC1-203ENST00000480856 KDM5CP41229 1560 aa25.32■■□□□ 1.64
FNDC1-203ENST00000480856 HECW2Q9P2P5 1572 aa25.32■■□□□ 1.64
FNDC1-203ENST00000480856 MAGI2Q86UL8 1455 aa25.3■■□□□ 1.64
FNDC1-203ENST00000480856 ARID4BQ4LE39 1312 aaPredicted RBP25.3■■□□□ 1.64
FNDC1-203ENST00000480856 CAMSAP2Q08AD1 1489 aa25.28■■□□□ 1.64
FNDC1-203ENST00000480856 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
FNDC1-203ENST00000480856 MYOM3Q5VTT5 1437 aa25.27■■□□□ 1.64
FNDC1-203ENST00000480856 KIAA1107Q9UPP5 1409 aa25.26■■□□□ 1.63
FNDC1-203ENST00000480856 KDM4FA0A1W2PPD8 638 aa25.23■■□□□ 1.63
FNDC1-203ENST00000480856 PPARGC1BQ86YN6 1023 aaKnown RBP25.23■■□□□ 1.63
FNDC1-203ENST00000480856 ABCA6Q8N139 1617 aa25.23■■□□□ 1.63
FNDC1-203ENST00000480856 SPAG9O60271 1321 aaKnown RBP25.22■■□□□ 1.63
FNDC1-203ENST00000480856 KIDINS220Q9ULH0 1771 aa25.21■■□□□ 1.63
FNDC1-203ENST00000480856 DIP2CQ9Y2E4 1556 aa25.21■■□□□ 1.63
FNDC1-203ENST00000480856 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
FNDC1-203ENST00000480856 ATP10AO60312 1499 aa25.2■■□□□ 1.62
FNDC1-203ENST00000480856 SIGLEC1Q9BZZ2 1709 aa25.19■■□□□ 1.62
FNDC1-203ENST00000480856 C9orf84Q5VXU9 1444 aa25.19■■□□□ 1.62
FNDC1-203ENST00000480856 ATP7AQ04656 1500 aa25.18■■□□□ 1.62
FNDC1-203ENST00000480856 MIA2Q96PC5 1412 aa25.18■■□□□ 1.62
FNDC1-203ENST00000480856 MBD5Q9P267 1494 aa25.17■■□□□ 1.62
FNDC1-203ENST00000480856 CCDC141Q6ZP82 1450 aa25.16■■□□□ 1.62
FNDC1-203ENST00000480856 PTPN23Q9H3S7 1636 aa25.16■■□□□ 1.62
FNDC1-203ENST00000480856 INO80Q9ULG1 1556 aaPredicted RBP25.16■■□□□ 1.62
FNDC1-203ENST00000480856 BCORL1Q5H9F3 1711 aa25.15■■□□□ 1.62
FNDC1-203ENST00000480856 MLECQ14165 292 aa25.14■■□□□ 1.62
FNDC1-203ENST00000480856 FGD6Q6ZV73 1430 aa25.13■■□□□ 1.61
FNDC1-203ENST00000480856 ARHGEF5Q12774 1597 aa25.13■■□□□ 1.61
FNDC1-203ENST00000480856 ADAMTSL3P82987 1691 aa25.09■■□□□ 1.61
FNDC1-203ENST00000480856 MADDQ8WXG6 1647 aa25.08■■□□□ 1.61
FNDC1-203ENST00000480856 RSPH4AQ5TD94 716 aa25.08■■□□□ 1.61
FNDC1-203ENST00000480856 REREQ9P2R6 1566 aa25.07■■□□□ 1.6
FNDC1-203ENST00000480856 TSPY4P0CV99 314 aa25.07■■□□□ 1.6
FNDC1-203ENST00000480856 TSPY10P0CW01 314 aa25.07■■□□□ 1.6
FNDC1-203ENST00000480856 ADGBQ8N7X0 1667 aa25.07■■□□□ 1.6
FNDC1-203ENST00000480856 FAM50AQ14320 339 aaKnown RBP25.06■■□□□ 1.6
FNDC1-203ENST00000480856 RIMS1Q86UR5 1692 aaKnown RBP25.05■■□□□ 1.6
FNDC1-203ENST00000480856 FER1L4A9Z1Z3 1794 aa25.04■■□□□ 1.6
FNDC1-203ENST00000480856 CROCC2H7BZ55 1655 aa25.03■■□□□ 1.6
FNDC1-203ENST00000480856 RTEL1-TNFRSF6BF6WH68 1400 aa25.03■■□□□ 1.6
FNDC1-203ENST00000480856 A2MP01023 1474 aa25.02■■□□□ 1.6
FNDC1-203ENST00000480856 TCOF1Q13428 1488 aaKnown RBP25.02■■□□□ 1.6
FNDC1-203ENST00000480856 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
FNDC1-203ENST00000480856 DNMT1P26358 1616 aaKnown RBP25■■□□□ 1.59
FNDC1-203ENST00000480856 MAST1Q9Y2H9 1570 aa24.98■■□□□ 1.59
FNDC1-203ENST00000480856 AGLP35573 1532 aa24.98■■□□□ 1.59
FNDC1-203ENST00000480856 DAPK1P53355 1430 aa24.97■■□□□ 1.59
FNDC1-203ENST00000480856 PLXNC1O60486 1568 aa24.97■■□□□ 1.59
FNDC1-203ENST00000480856 PTPRMP28827 1452 aa24.96■■□□□ 1.59
FNDC1-203ENST00000480856 ABCC5O15440 1437 aa24.95■■□□□ 1.59
FNDC1-203ENST00000480856 ESF1Q9H501 851 aaKnown RBP24.93■■□□□ 1.58
FNDC1-203ENST00000480856 SHANK2Q9UPX8 1470 aa24.92■■□□□ 1.58
FNDC1-203ENST00000480856 CHIC2Q9UKJ5 165 aa24.92■■□□□ 1.58
FNDC1-203ENST00000480856 DHX29Q7Z478 1369 aaKnown RBP24.91■■□□□ 1.58
FNDC1-203ENST00000480856 GGT6Q6P531 493 aa24.89■■□□□ 1.58
FNDC1-203ENST00000480856 KIF3BO15066 747 aa24.87■■□□□ 1.57
FNDC1-203ENST00000480856 ITGAEP38570 1179 aa24.87■■□□□ 1.57
FNDC1-203ENST00000480856 RRP7BPQ9NSQ0 103 aa24.87■■□□□ 1.57
FNDC1-203ENST00000480856 KIF15Q9NS87 1388 aa24.85■■□□□ 1.57
FNDC1-203ENST00000480856 ANKRD30AQ9BXX3 1397 aa24.83■■□□□ 1.57
FNDC1-203ENST00000480856 DUOX2Q9NRD8 1548 aa24.83■■□□□ 1.57
FNDC1-203ENST00000480856 CLTCQ00610 1675 aaKnown RBP24.83■■□□□ 1.57
FNDC1-203ENST00000480856 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
FNDC1-203ENST00000480856 EIF2AK4Q9P2K8 1649 aaKnown RBP24.79■■□□□ 1.56
FNDC1-203ENST00000480856 C3P01024 1663 aa24.79■■□□□ 1.56
FNDC1-203ENST00000480856 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
FNDC1-203ENST00000480856 MROH2AA6NES4 1674 aa24.76■■□□□ 1.55
FNDC1-203ENST00000480856 RRBP1Q9P2E9 1410 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms