RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 CDC42BPBQ9Y5S2 1711 aa20.12■□□□□ 0.81
COL4A2-206ENST00000480609 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
COL4A2-206ENST00000480609 KIAA1107Q9UPP5 1409 aa20.1■□□□□ 0.81
COL4A2-206ENST00000480609 MAP3K4Q9Y6R4 1608 aa20.09■□□□□ 0.81
COL4A2-206ENST00000480609 PLEKHH2Q8IVE3 1493 aa20.09■□□□□ 0.81
COL4A2-206ENST00000480609 CD109Q6YHK3 1445 aa20.09■□□□□ 0.81
COL4A2-206ENST00000480609 EFCAB2Q5VUJ9 269 aa20.07■□□□□ 0.8
COL4A2-206ENST00000480609 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
COL4A2-206ENST00000480609 CAMSAP2Q08AD1 1489 aa20.05■□□□□ 0.8
COL4A2-206ENST00000480609 ARHGAP5Q13017 1502 aa20.05■□□□□ 0.8
COL4A2-206ENST00000480609 NEO1Q92859 1461 aa20.05■□□□□ 0.8
COL4A2-206ENST00000480609 ARHGEF5Q12774 1597 aa20.04■□□□□ 0.8
COL4A2-206ENST00000480609 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
COL4A2-206ENST00000480609 SAMD9LQ8IVG5 1584 aa20.03■□□□□ 0.8
COL4A2-206ENST00000480609 FANCAO15360 1455 aa20.02■□□□□ 0.8
COL4A2-206ENST00000480609 CFAP74Q9C0B2 1584 aa20.02■□□□□ 0.8
COL4A2-206ENST00000480609 FAM69CQ0P6D2 419 aa20.01■□□□□ 0.79
COL4A2-206ENST00000480609 KIF13AQ9H1H9 1805 aa20■□□□□ 0.79
COL4A2-206ENST00000480609 DNMT1P26358 1616 aaKnown RBP20■□□□□ 0.79
COL4A2-206ENST00000480609 ABCC1P33527 1531 aa19.99■□□□□ 0.79
COL4A2-206ENST00000480609 ZNF644Q9H582 1327 aaPredicted RBP19.99■□□□□ 0.79
COL4A2-206ENST00000480609 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
COL4A2-206ENST00000480609 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
COL4A2-206ENST00000480609 AKNAQ7Z591 1439 aa19.98■□□□□ 0.79
COL4A2-206ENST00000480609 ABCC5O15440 1437 aa19.97■□□□□ 0.79
COL4A2-206ENST00000480609 DAPK1P53355 1430 aa19.97■□□□□ 0.79
COL4A2-206ENST00000480609 TEX14Q8IWB6 1497 aa19.97■□□□□ 0.79
COL4A2-206ENST00000480609 ROCK1Q13464 1354 aa19.95■□□□□ 0.79
COL4A2-206ENST00000480609 PPRC1Q5VV67 1664 aaKnown RBP19.94■□□□□ 0.78
COL4A2-206ENST00000480609 CCDC141Q6ZP82 1450 aa19.94■□□□□ 0.78
COL4A2-206ENST00000480609 ARHGEF12Q9NZN5 1544 aa19.94■□□□□ 0.78
COL4A2-206ENST00000480609 PTPRKQ15262 1439 aa19.93■□□□□ 0.78
COL4A2-206ENST00000480609 ADGRL2O95490 1459 aa19.93■□□□□ 0.78
COL4A2-206ENST00000480609 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
COL4A2-206ENST00000480609 SYCP2Q9BX26 1530 aa19.92■□□□□ 0.78
COL4A2-206ENST00000480609 MAST1Q9Y2H9 1570 aa19.92■□□□□ 0.78
COL4A2-206ENST00000480609 ADGRL1O94910 1474 aa19.92■□□□□ 0.78
COL4A2-206ENST00000480609 ZNF777Q9ULD5 760 aaPredicted RBP19.91■□□□□ 0.78
COL4A2-206ENST00000480609 CROCC2H7BZ55 1655 aa19.91■□□□□ 0.78
COL4A2-206ENST00000480609 RTEL1-TNFRSF6BF6WH68 1400 aa19.9■□□□□ 0.78
COL4A2-206ENST00000480609 SCAPERQ9BY12 1400 aa19.89■□□□□ 0.77
COL4A2-206ENST00000480609 HFM1A2PYH4 1435 aa19.88■□□□□ 0.77
COL4A2-206ENST00000480609 HRCP23327 699 aa19.88■□□□□ 0.77
COL4A2-206ENST00000480609 ZNF518AQ6AHZ1 1483 aa19.87■□□□□ 0.77
COL4A2-206ENST00000480609 KDM5CP41229 1560 aa19.87■□□□□ 0.77
COL4A2-206ENST00000480609 TRAPPC8Q9Y2L5 1435 aa19.86■□□□□ 0.77
COL4A2-206ENST00000480609 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.77
COL4A2-206ENST00000480609 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
COL4A2-206ENST00000480609 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
COL4A2-206ENST00000480609 POGZQ7Z3K3 1410 aa19.85■□□□□ 0.77
COL4A2-206ENST00000480609 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
COL4A2-206ENST00000480609 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
COL4A2-206ENST00000480609 DENND4BO75064 1496 aaPredicted RBP19.84■□□□□ 0.77
COL4A2-206ENST00000480609 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.77
COL4A2-206ENST00000480609 MLH3Q9UHC1 1453 aa19.82■□□□□ 0.76
COL4A2-206ENST00000480609 NAIPQ13075 1403 aa19.82■□□□□ 0.76
COL4A2-206ENST00000480609 PLXNC1O60486 1568 aa19.82■□□□□ 0.76
COL4A2-206ENST00000480609 ANKRD30AQ9BXX3 1397 aa19.82■□□□□ 0.76
COL4A2-206ENST00000480609 ADGBQ8N7X0 1667 aa19.81■□□□□ 0.76
COL4A2-206ENST00000480609 INO80Q9ULG1 1556 aaPredicted RBP19.79■□□□□ 0.76
COL4A2-206ENST00000480609 SETD5Q9C0A6 1442 aa19.79■□□□□ 0.76
COL4A2-206ENST00000480609 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
COL4A2-206ENST00000480609 ZFYVE16Q7Z3T8 1539 aa19.78■□□□□ 0.76
COL4A2-206ENST00000480609 RICTORQ6R327 1708 aa19.78■□□□□ 0.76
COL4A2-206ENST00000480609 MAGI2Q86UL8 1455 aa19.78■□□□□ 0.76
COL4A2-206ENST00000480609 GCC2Q8IWJ2 1684 aa19.78■□□□□ 0.76
COL4A2-206ENST00000480609 TSPOAP1O95153 1857 aa19.77■□□□□ 0.76
COL4A2-206ENST00000480609 ITGAEP38570 1179 aa19.76■□□□□ 0.75
COL4A2-206ENST00000480609 AFAP1Q8N556 730 aa19.76■□□□□ 0.75
COL4A2-206ENST00000480609 SPAG9O60271 1321 aaKnown RBP19.76■□□□□ 0.75
COL4A2-206ENST00000480609 ATP7AQ04656 1500 aa19.75■□□□□ 0.75
COL4A2-206ENST00000480609 FRMPD1Q5SYB0 1578 aa19.74■□□□□ 0.75
COL4A2-206ENST00000480609 HECW2Q9P2P5 1572 aa19.73■□□□□ 0.75
COL4A2-206ENST00000480609 KIDINS220Q9ULH0 1771 aa19.72■□□□□ 0.75
COL4A2-206ENST00000480609 COL17A1Q9UMD9 1497 aaPredicted RBP19.72■□□□□ 0.75
COL4A2-206ENST00000480609 DUOX2Q9NRD8 1548 aa19.71■□□□□ 0.75
COL4A2-206ENST00000480609 KIF15Q9NS87 1388 aa19.71■□□□□ 0.75
COL4A2-206ENST00000480609 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
COL4A2-206ENST00000480609 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
COL4A2-206ENST00000480609 RAB3GAP2Q9H2M9 1393 aa19.7■□□□□ 0.74
COL4A2-206ENST00000480609 ERBINQ96RT1 1412 aa19.7■□□□□ 0.74
COL4A2-206ENST00000480609 ANKRD50Q9ULJ7 1429 aa19.69■□□□□ 0.74
COL4A2-206ENST00000480609 RRP7BPQ9NSQ0 103 aa19.68■□□□□ 0.74
COL4A2-206ENST00000480609 RAPGEF3O95398 923 aa19.67■□□□□ 0.74
COL4A2-206ENST00000480609 DHX29Q7Z478 1369 aaKnown RBP19.67■□□□□ 0.74
COL4A2-206ENST00000480609 REREQ9P2R6 1566 aa19.66■□□□□ 0.74
COL4A2-206ENST00000480609 BCORL1Q5H9F3 1711 aa19.63■□□□□ 0.73
COL4A2-206ENST00000480609 EIF2AK4Q9P2K8 1649 aaKnown RBP19.63■□□□□ 0.73
COL4A2-206ENST00000480609 DIP2CQ9Y2E4 1556 aa19.62■□□□□ 0.73
COL4A2-206ENST00000480609 ABCA6Q8N139 1617 aa19.61■□□□□ 0.73
COL4A2-206ENST00000480609 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
COL4A2-206ENST00000480609 A2MP01023 1474 aa19.6■□□□□ 0.73
COL4A2-206ENST00000480609 KDM6BO15054 1643 aa19.59■□□□□ 0.73
COL4A2-206ENST00000480609 ATP10AO60312 1499 aa19.59■□□□□ 0.73
COL4A2-206ENST00000480609 AGLP35573 1532 aa19.58■□□□□ 0.73
COL4A2-206ENST00000480609 ARHGEF40Q8TER5 1519 aa19.58■□□□□ 0.73
COL4A2-206ENST00000480609 YEATS2Q9ULM3 1422 aa19.58■□□□□ 0.72
COL4A2-206ENST00000480609 UNC13BO14795 1591 aa19.57■□□□□ 0.72
COL4A2-206ENST00000480609 CLSPNQ9HAW4 1339 aa19.56■□□□□ 0.72
COL4A2-206ENST00000480609 DEPDC5O75140 1603 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms