RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
PBRM1-220ENST00000480064 NLRP6P59044 892 aa12.5□□□□□ -0.41
PBRM1-220ENST00000480064 PAXIP1Q6ZW49 1069 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-220ENST00000480064 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
PBRM1-220ENST00000480064 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
PBRM1-220ENST00000480064 FBXO22Q8NEZ5 403 aa12.46□□□□□ -0.41
PBRM1-220ENST00000480064 MFRPQ9BY79 579 aa12.44□□□□□ -0.42
PBRM1-220ENST00000480064 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
PBRM1-220ENST00000480064 HOXB3P14651 431 aaPredicted RBP12.43□□□□□ -0.42
PBRM1-220ENST00000480064 EMP3P54852 163 aa12.42□□□□□ -0.42
PBRM1-220ENST00000480064 TMEM92Q6UXU6 159 aa12.42□□□□□ -0.42
PBRM1-220ENST00000480064 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
PBRM1-220ENST00000480064 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
PBRM1-220ENST00000480064 FAM205CA6NFA0 338 aa12.34□□□□□ -0.43
PBRM1-220ENST00000480064 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
PBRM1-220ENST00000480064 RIMBP2O15034 1052 aa12.33□□□□□ -0.44
PBRM1-220ENST00000480064 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.44
PBRM1-220ENST00000480064 NBR1Q14596 966 aa12.32□□□□□ -0.44
PBRM1-220ENST00000480064 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
PBRM1-220ENST00000480064 POTEB3A0JP26 581 aa12.3□□□□□ -0.44
PBRM1-220ENST00000480064 POTEBQ6S5H4 581 aa12.3□□□□□ -0.44
PBRM1-220ENST00000480064 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
PBRM1-220ENST00000480064 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.45
PBRM1-220ENST00000480064 ERBB3P21860 1342 aa12.24□□□□□ -0.45
PBRM1-220ENST00000480064 TSHZ2Q9NRE2 1034 aa12.24□□□□□ -0.45
PBRM1-220ENST00000480064 PPP1R37O75864 691 aa12.23□□□□□ -0.45
PBRM1-220ENST00000480064 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
PBRM1-220ENST00000480064 C2orf72A6NCS6 295 aa12.22□□□□□ -0.45
PBRM1-220ENST00000480064 KIF3CO14782 793 aa12.22□□□□□ -0.45
PBRM1-220ENST00000480064 GPR153Q6NV75 609 aa12.22□□□□□ -0.45
PBRM1-220ENST00000480064 SPNS2Q8IVW8 549 aa12.21□□□□□ -0.45
PBRM1-220ENST00000480064 KRTAP3-3Q9BYR6 98 aa12.2□□□□□ -0.46
PBRM1-220ENST00000480064 KRTAP3-2Q9BYR7 98 aa12.2□□□□□ -0.46
PBRM1-220ENST00000480064 ARSIQ5FYB1 569 aa12.17□□□□□ -0.46
PBRM1-220ENST00000480064 TMC2Q8TDI7 906 aa12.17□□□□□ -0.46
PBRM1-220ENST00000480064 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
PBRM1-220ENST00000480064 TIMELESSQ9UNS1 1208 aa12.16□□□□□ -0.46
PBRM1-220ENST00000480064 MMRN1Q13201 1228 aa12.15□□□□□ -0.46
PBRM1-220ENST00000480064 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
PBRM1-220ENST00000480064 TULP1O00294 542 aaPredicted RBP12.14□□□□□ -0.47
PBRM1-220ENST00000480064 DNAJC5Q9H3Z4 198 aa12.13□□□□□ -0.47
PBRM1-220ENST00000480064 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.47
PBRM1-220ENST00000480064 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
PBRM1-220ENST00000480064 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
PBRM1-220ENST00000480064 SLC34A2O95436 690 aa12.08□□□□□ -0.48
PBRM1-220ENST00000480064 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
PBRM1-220ENST00000480064 ZNF316A6NFI3 1004 aaPredicted RBP12.07□□□□□ -0.48
PBRM1-220ENST00000480064 ARXQ96QS3 562 aa12.06□□□□□ -0.48
PBRM1-220ENST00000480064 RYDENQ9NUL5 291 aaKnown RBP12.06□□□□□ -0.48
PBRM1-220ENST00000480064 PCDHGA4Q9Y5G9 962 aa12.05□□□□□ -0.48
PBRM1-220ENST00000480064 NUDT7P0C024 238 aa12.04□□□□□ -0.48
PBRM1-220ENST00000480064 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
PBRM1-220ENST00000480064 FOXK1P85037 733 aa12.01□□□□□ -0.49
PBRM1-220ENST00000480064 PLPP6Q8IY26 295 aa11.99□□□□□ -0.49
PBRM1-220ENST00000480064 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-220ENST00000480064 LHX6Q9UPM6 363 aa11.98□□□□□ -0.49
PBRM1-220ENST00000480064 DSG2Q14126 1118 aa11.97□□□□□ -0.49
PBRM1-220ENST00000480064 PTCD2Q8WV60 388 aaKnown RBP11.96□□□□□ -0.49
PBRM1-220ENST00000480064 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
PBRM1-220ENST00000480064 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
PBRM1-220ENST00000480064 CRISPLD2Q9H0B8 497 aa11.9□□□□□ -0.5
PBRM1-220ENST00000480064 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
PBRM1-220ENST00000480064 TBC1D12O60347 775 aa11.89□□□□□ -0.51
PBRM1-220ENST00000480064 PBX2P40425 430 aa11.89□□□□□ -0.51
PBRM1-220ENST00000480064 TMEM132AQ24JP5 1023 aa11.89□□□□□ -0.51
PBRM1-220ENST00000480064 PSDA5PKW4 1024 aaPredicted RBP11.87□□□□□ -0.51
PBRM1-220ENST00000480064 PDE4AP27815 886 aa11.87□□□□□ -0.51
PBRM1-220ENST00000480064 LSM11P83369 360 aaKnown RBP eCLIP11.87□□□□□ -0.51
PBRM1-220ENST00000480064 MYT1LQ9UL68 1186 aa11.87□□□□□ -0.51
PBRM1-220ENST00000480064 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
PBRM1-220ENST00000480064 PPP1R15BQ5SWA1 713 aa11.85□□□□□ -0.51
PBRM1-220ENST00000480064 POTEEQ6S8J3 1075 aa11.85□□□□□ -0.51
PBRM1-220ENST00000480064 AXIN2Q9Y2T1 843 aa11.85□□□□□ -0.51
PBRM1-220ENST00000480064 NCKAP5LQ9HCH0 1330 aa11.85□□□□□ -0.51
PBRM1-220ENST00000480064 PTGER2P43116 358 aa11.84□□□□□ -0.51
PBRM1-220ENST00000480064 C14orf37Q86TY3 774 aa11.84□□□□□ -0.51
PBRM1-220ENST00000480064 HOMEZQ8IX15 550 aa11.84□□□□□ -0.51
PBRM1-220ENST00000480064 OXER1Q8TDS5 423 aa11.83□□□□□ -0.52
PBRM1-220ENST00000480064 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
PBRM1-220ENST00000480064 ARHGAP33O14559 1287 aa11.8□□□□□ -0.52
PBRM1-220ENST00000480064 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
PBRM1-220ENST00000480064 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
PBRM1-220ENST00000480064 DDX27Q96GQ7 796 aaKnown RBP11.76□□□□□ -0.53
PBRM1-220ENST00000480064 MFSD10Q14728 455 aa11.73□□□□□ -0.53
PBRM1-220ENST00000480064 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
PBRM1-220ENST00000480064 PSEN2P49810 448 aa11.72□□□□□ -0.53
PBRM1-220ENST00000480064 ADGRD1Q6QNK2 874 aa11.71□□□□□ -0.53
PBRM1-220ENST00000480064 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.53
PBRM1-220ENST00000480064 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
PBRM1-220ENST00000480064 ZNF454Q8N9F8 522 aa11.69□□□□□ -0.54
PBRM1-220ENST00000480064 TK2O00142 265 aa11.68□□□□□ -0.54
PBRM1-220ENST00000480064 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
PBRM1-220ENST00000480064 EVI5O60447 810 aa11.67□□□□□ -0.54
PBRM1-220ENST00000480064 MAP3K9P80192 1104 aa11.67□□□□□ -0.54
PBRM1-220ENST00000480064 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
PBRM1-220ENST00000480064 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
PBRM1-220ENST00000480064 FOSBP53539 338 aa11.65□□□□□ -0.54
PBRM1-220ENST00000480064 EMILIN3Q9NT22 766 aa11.65□□□□□ -0.54
PBRM1-220ENST00000480064 HRO43593 1189 aa11.63□□□□□ -0.55
PBRM1-220ENST00000480064 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms