RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 POGZQ7Z3K3 1410 aa24.86■■□□□ 1.57
SEMA6C-206ENST00000479820 ATP1B4Q9UN42 357 aaPredicted RBP24.85■■□□□ 1.57
SEMA6C-206ENST00000479820 MAGI2Q86UL8 1455 aa24.84■■□□□ 1.57
SEMA6C-206ENST00000479820 SIGLEC1Q9BZZ2 1709 aa24.83■■□□□ 1.57
SEMA6C-206ENST00000479820 ZFYVE16Q7Z3T8 1539 aa24.82■■□□□ 1.56
SEMA6C-206ENST00000479820 CDC42BPAQ5VT25 1732 aa24.82■■□□□ 1.56
SEMA6C-206ENST00000479820 SCAPERQ9BY12 1400 aa24.79■■□□□ 1.56
SEMA6C-206ENST00000479820 KDM5CP41229 1560 aa24.79■■□□□ 1.56
SEMA6C-206ENST00000479820 ARHGAP5Q13017 1502 aa24.78■■□□□ 1.56
SEMA6C-206ENST00000479820 MADDQ8WXG6 1647 aa24.78■■□□□ 1.56
SEMA6C-206ENST00000479820 HECW2Q9P2P5 1572 aa24.77■■□□□ 1.56
SEMA6C-206ENST00000479820 YEATS2Q9ULM3 1422 aa24.76■■□□□ 1.55
SEMA6C-206ENST00000479820 EFCAB2Q5VUJ9 269 aa24.75■■□□□ 1.55
SEMA6C-206ENST00000479820 ITSN2Q9NZM3 1697 aa24.74■■□□□ 1.55
SEMA6C-206ENST00000479820 ABCC1P33527 1531 aa24.73■■□□□ 1.55
SEMA6C-206ENST00000479820 PTPRMP28827 1452 aa24.73■■□□□ 1.55
SEMA6C-206ENST00000479820 ZNF518AQ6AHZ1 1483 aa24.73■■□□□ 1.55
SEMA6C-206ENST00000479820 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
SEMA6C-206ENST00000479820 RIMS1Q86UR5 1692 aaKnown RBP24.69■■□□□ 1.54
SEMA6C-206ENST00000479820 FER1L4A9Z1Z3 1794 aa24.66■■□□□ 1.54
SEMA6C-206ENST00000479820 REREQ9P2R6 1566 aa24.66■■□□□ 1.54
SEMA6C-206ENST00000479820 ARHGEF12Q9NZN5 1544 aa24.65■■□□□ 1.54
SEMA6C-206ENST00000479820 ATP10AO60312 1499 aa24.64■■□□□ 1.54
SEMA6C-206ENST00000479820 DIP2CQ9Y2E4 1556 aa24.64■■□□□ 1.54
SEMA6C-206ENST00000479820 C9orf84Q5VXU9 1444 aa24.64■■□□□ 1.54
SEMA6C-206ENST00000479820 ABCA6Q8N139 1617 aa24.63■■□□□ 1.53
SEMA6C-206ENST00000479820 SAMD9LQ8IVG5 1584 aa24.63■■□□□ 1.53
SEMA6C-206ENST00000479820 MLH3Q9UHC1 1453 aa24.62■■□□□ 1.53
SEMA6C-206ENST00000479820 ARID4BQ4LE39 1312 aaPredicted RBP24.61■■□□□ 1.53
SEMA6C-206ENST00000479820 GPATCH8Q9UKJ3 1502 aaKnown RBP24.61■■□□□ 1.53
SEMA6C-206ENST00000479820 KIDINS220Q9ULH0 1771 aa24.6■■□□□ 1.53
SEMA6C-206ENST00000479820 EHBP1L1Q8N3D4 1523 aa24.6■■□□□ 1.53
SEMA6C-206ENST00000479820 TRAPPC8Q9Y2L5 1435 aa24.58■■□□□ 1.53
SEMA6C-206ENST00000479820 TIAM1Q13009 1591 aa24.56■■□□□ 1.52
SEMA6C-206ENST00000479820 AFAP1Q8N556 730 aa24.56■■□□□ 1.52
SEMA6C-206ENST00000479820 SYCP2Q9BX26 1530 aa24.54■■□□□ 1.52
SEMA6C-206ENST00000479820 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
SEMA6C-206ENST00000479820 AGLP35573 1532 aa24.51■■□□□ 1.51
SEMA6C-206ENST00000479820 KIAA1107Q9UPP5 1409 aa24.5■■□□□ 1.51
SEMA6C-206ENST00000479820 PLEKHH2Q8IVE3 1493 aa24.5■■□□□ 1.51
SEMA6C-206ENST00000479820 LMTK3Q96Q04 1460 aa24.49■■□□□ 1.51
SEMA6C-206ENST00000479820 INO80Q9ULG1 1556 aaPredicted RBP24.49■■□□□ 1.51
SEMA6C-206ENST00000479820 SUPT6HQ7KZ85 1726 aaKnown RBP24.48■■□□□ 1.51
SEMA6C-206ENST00000479820 CCNB3Q8WWL7 1395 aa24.47■■□□□ 1.51
SEMA6C-206ENST00000479820 VPS8Q8N3P4 1428 aa24.45■■□□□ 1.51
SEMA6C-206ENST00000479820 ATP7AQ04656 1500 aa24.43■■□□□ 1.5
SEMA6C-206ENST00000479820 PLXNC1O60486 1568 aa24.42■■□□□ 1.5
SEMA6C-206ENST00000479820 PREX1Q8TCU6 1659 aa24.41■■□□□ 1.5
SEMA6C-206ENST00000479820 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
SEMA6C-206ENST00000479820 MLECQ14165 292 aa24.4■■□□□ 1.5
SEMA6C-206ENST00000479820 CFDP1Q9UEE9 299 aaPredicted RBP24.4■■□□□ 1.5
SEMA6C-206ENST00000479820 SETD1BQ9UPS6 1966 aaKnown RBP24.4■■□□□ 1.5
SEMA6C-206ENST00000479820 NCOA2Q15596 1464 aa24.38■■□□□ 1.49
SEMA6C-206ENST00000479820 C3P01024 1663 aa24.38■■□□□ 1.49
SEMA6C-206ENST00000479820 ADGBQ8N7X0 1667 aa24.38■■□□□ 1.49
SEMA6C-206ENST00000479820 MAP3K1Q13233 1512 aa24.38■■□□□ 1.49
SEMA6C-206ENST00000479820 MBD5Q9P267 1494 aa24.38■■□□□ 1.49
SEMA6C-206ENST00000479820 ZNF777Q9ULD5 760 aaPredicted RBP24.37■■□□□ 1.49
SEMA6C-206ENST00000479820 MROH2AA6NES4 1674 aa24.35■■□□□ 1.49
SEMA6C-206ENST00000479820 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.49
SEMA6C-206ENST00000479820 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.49
SEMA6C-206ENST00000479820 MYT1LQ9UL68 1186 aa24.33■■□□□ 1.49
SEMA6C-206ENST00000479820 SPAG9O60271 1321 aaKnown RBP24.33■■□□□ 1.48
SEMA6C-206ENST00000479820 CAMSAP2Q08AD1 1489 aa24.3■■□□□ 1.48
SEMA6C-206ENST00000479820 ZNF644Q9H582 1327 aaPredicted RBP24.29■■□□□ 1.48
SEMA6C-206ENST00000479820 RTEL1-TNFRSF6BF6WH68 1400 aa24.28■■□□□ 1.48
SEMA6C-206ENST00000479820 A2MP01023 1474 aa24.28■■□□□ 1.48
SEMA6C-206ENST00000479820 ARHGEF5Q12774 1597 aa24.28■■□□□ 1.48
SEMA6C-206ENST00000479820 CNTLNQ9NXG0 1405 aa24.27■■□□□ 1.48
SEMA6C-206ENST00000479820 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
SEMA6C-206ENST00000479820 CLTCQ00610 1675 aaKnown RBP24.22■■□□□ 1.47
SEMA6C-206ENST00000479820 CEBPAP49715 358 aaPredicted RBP24.21■■□□□ 1.47
SEMA6C-206ENST00000479820 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
SEMA6C-206ENST00000479820 STRCQ7RTU9 1775 aa24.2■■□□□ 1.46
SEMA6C-206ENST00000479820 HSPA2P54652 639 aa24.18■■□□□ 1.46
SEMA6C-206ENST00000479820 UHRF1BP1Q6BDS2 1440 aa24.18■■□□□ 1.46
SEMA6C-206ENST00000479820 MAST1Q9Y2H9 1570 aa24.17■■□□□ 1.46
SEMA6C-206ENST00000479820 NPATQ14207 1427 aa24.16■■□□□ 1.46
SEMA6C-206ENST00000479820 RSPH4AQ5TD94 716 aa24.15■■□□□ 1.46
SEMA6C-206ENST00000479820 MYOM3Q5VTT5 1437 aa24.15■■□□□ 1.46
SEMA6C-206ENST00000479820 KANK4Q5T7N3 995 aaPredicted RBP24.14■■□□□ 1.45
SEMA6C-206ENST00000479820 MIA2Q96PC5 1412 aa24.14■■□□□ 1.45
SEMA6C-206ENST00000479820 FAM135AQ9P2D6 1515 aa24.14■■□□□ 1.45
SEMA6C-206ENST00000479820 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
SEMA6C-206ENST00000479820 ZNF142P52746 1687 aaPredicted RBP24.13■■□□□ 1.45
SEMA6C-206ENST00000479820 DHX29Q7Z478 1369 aaKnown RBP24.13■■□□□ 1.45
SEMA6C-206ENST00000479820 ESF1Q9H501 851 aaKnown RBP24.12■■□□□ 1.45
SEMA6C-206ENST00000479820 ZMYM3Q14202 1370 aa24.1■■□□□ 1.45
SEMA6C-206ENST00000479820 CROCC2H7BZ55 1655 aa24.1■■□□□ 1.45
SEMA6C-206ENST00000479820 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
SEMA6C-206ENST00000479820 MYO3AQ8NEV4 1616 aa24.09■■□□□ 1.45
SEMA6C-206ENST00000479820 RNF17Q9BXT8 1623 aaKnown RBP24.07■■□□□ 1.44
SEMA6C-206ENST00000479820 EIF2AK4Q9P2K8 1649 aaKnown RBP24.06■■□□□ 1.44
SEMA6C-206ENST00000479820 PTPRKQ15262 1439 aa24.06■■□□□ 1.44
SEMA6C-206ENST00000479820 PTPN23Q9H3S7 1636 aa24.04■■□□□ 1.44
SEMA6C-206ENST00000479820 KDM5DQ9BY66 1539 aa24.04■■□□□ 1.44
SEMA6C-206ENST00000479820 GGT6Q6P531 493 aa24.01■■□□□ 1.43
SEMA6C-206ENST00000479820 SHANK2Q9UPX8 1470 aa24■■□□□ 1.43
SEMA6C-206ENST00000479820 CEP170BQ9Y4F5 1589 aaPredicted RBP24■■□□□ 1.43
SEMA6C-206ENST00000479820 ZC3H13Q5T200 1668 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms