RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 CRISPLD2Q9H0B8 497 aa11.72□□□□□ -0.53
BRAF-203ENST00000479537 OCEL1Q9H607 264 aa11.72□□□□□ -0.53
BRAF-203ENST00000479537 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
BRAF-203ENST00000479537 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.53
BRAF-203ENST00000479537 MFSD10Q14728 455 aa11.7□□□□□ -0.54
BRAF-203ENST00000479537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
BRAF-203ENST00000479537 PDCD7Q8N8D1 485 aaKnown RBP11.69□□□□□ -0.54
BRAF-203ENST00000479537 ILDR1Q86SU0 546 aaPredicted RBP11.68□□□□□ -0.54
BRAF-203ENST00000479537 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
BRAF-203ENST00000479537 SEMA3EO15041 775 aa11.66□□□□□ -0.54
BRAF-203ENST00000479537 G3V3G9 751 aa11.63□□□□□ -0.55
BRAF-203ENST00000479537 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
BRAF-203ENST00000479537 TESPA1A2RU30 521 aaPredicted RBP11.62□□□□□ -0.55
BRAF-203ENST00000479537 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
BRAF-203ENST00000479537 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
BRAF-203ENST00000479537 TMC2Q8TDI7 906 aa11.6□□□□□ -0.55
BRAF-203ENST00000479537 GPHNQ9NQX3 736 aaPredicted RBP11.6□□□□□ -0.55
BRAF-203ENST00000479537 CAMK2BQ13554 666 aa11.58□□□□□ -0.56
BRAF-203ENST00000479537 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
BRAF-203ENST00000479537 BOLA1Q9Y3E2 137 aa11.58□□□□□ -0.56
BRAF-203ENST00000479537 ARIH1Q9Y4X5 557 aaPredicted RBP11.55□□□□□ -0.56
BRAF-203ENST00000479537 DSG2Q14126 1118 aa11.53□□□□□ -0.56
BRAF-203ENST00000479537 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
BRAF-203ENST00000479537 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
BRAF-203ENST00000479537 DPYSL4O14531 572 aa11.51□□□□□ -0.57
BRAF-203ENST00000479537 TMEM121BQ9BXQ6 578 aaPredicted RBP11.49□□□□□ -0.57
BRAF-203ENST00000479537 FOXK1P85037 733 aa11.48□□□□□ -0.57
BRAF-203ENST00000479537 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
BRAF-203ENST00000479537 PLPP6Q8IY26 295 aa11.47□□□□□ -0.57
BRAF-203ENST00000479537 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
BRAF-203ENST00000479537 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
BRAF-203ENST00000479537 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.57
BRAF-203ENST00000479537 MLLT3P42568 568 aaPredicted RBP11.45□□□□□ -0.58
BRAF-203ENST00000479537 SPDYE16A6NNV3 312 aaPredicted RBP11.44□□□□□ -0.58
BRAF-203ENST00000479537 SLC24A3Q9HC58 644 aa11.43□□□□□ -0.58
BRAF-203ENST00000479537 RBM26Q5T8P6 1007 aaKnown RBP11.42□□□□□ -0.58
BRAF-203ENST00000479537 GPIHBP1Q8IV16 184 aa11.42□□□□□ -0.58
BRAF-203ENST00000479537 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.42□□□□□ -0.58
BRAF-203ENST00000479537 PDIA6Q15084 440 aa11.41□□□□□ -0.58
BRAF-203ENST00000479537 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
BRAF-203ENST00000479537 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
BRAF-203ENST00000479537 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
BRAF-203ENST00000479537 KIF3CO14782 793 aa11.38□□□□□ -0.59
BRAF-203ENST00000479537 ZMYND10O75800 440 aa11.38□□□□□ -0.59
BRAF-203ENST00000479537 NEUROD2Q15784 382 aa11.38□□□□□ -0.59
BRAF-203ENST00000479537 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
BRAF-203ENST00000479537 LHX8Q68G74 356 aa11.38□□□□□ -0.59
BRAF-203ENST00000479537 MAMSTRQ6ZN01 415 aa11.37□□□□□ -0.59
BRAF-203ENST00000479537 SCUBE2Q9NQ36 999 aa11.37□□□□□ -0.59
BRAF-203ENST00000479537 BRPF1P55201 1214 aaPredicted RBP11.35□□□□□ -0.59
BRAF-203ENST00000479537 KRI1Q8N9T8 703 aaKnown RBP11.35□□□□□ -0.59
BRAF-203ENST00000479537 GRXCR2A6NFK2 248 aa11.34□□□□□ -0.59
BRAF-203ENST00000479537 BARGINQ6ZT62 677 aa11.33□□□□□ -0.6
BRAF-203ENST00000479537 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
BRAF-203ENST00000479537 GTF3C3Q9Y5Q9 886 aa11.32□□□□□ -0.6
BRAF-203ENST00000479537 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
BRAF-203ENST00000479537 TBC1D12O60347 775 aa11.29□□□□□ -0.6
BRAF-203ENST00000479537 NUTM2FA1L443 756 aa11.28□□□□□ -0.6
BRAF-203ENST00000479537 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
BRAF-203ENST00000479537 OXER1Q8TDS5 423 aa11.27□□□□□ -0.61
BRAF-203ENST00000479537 AK7Q96M32 723 aa11.27□□□□□ -0.61
BRAF-203ENST00000479537 DDX12PQ92771 950 aa11.26□□□□□ -0.61
BRAF-203ENST00000479537 EVI5O60447 810 aa11.23□□□□□ -0.61
BRAF-203ENST00000479537 OSBPP22059 807 aa11.18□□□□□ -0.62
BRAF-203ENST00000479537 PTGER2P43116 358 aa11.18□□□□□ -0.62
BRAF-203ENST00000479537 GPR37O15354 613 aa11.17□□□□□ -0.62
BRAF-203ENST00000479537 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
BRAF-203ENST00000479537 PTCD2Q8WV60 388 aaKnown RBP11.16□□□□□ -0.62
BRAF-203ENST00000479537 GPBP1L1Q9HC44 474 aaPredicted RBP11.16□□□□□ -0.62
BRAF-203ENST00000479537 TRIM66O15016 1216 aa11.15□□□□□ -0.62
BRAF-203ENST00000479537 FCHSD2O94868 740 aa11.15□□□□□ -0.62
BRAF-203ENST00000479537 GNPATO15228 680 aa11.13□□□□□ -0.63
BRAF-203ENST00000479537 PDE4DQ08499 809 aa11.13□□□□□ -0.63
BRAF-203ENST00000479537 ERICH6Q7L0X2 663 aa11.13□□□□□ -0.63
BRAF-203ENST00000479537 MINK1Q8N4C8 1332 aaPredicted RBP11.12□□□□□ -0.63
BRAF-203ENST00000479537 HOXB3P14651 431 aaPredicted RBP11.12□□□□□ -0.63
BRAF-203ENST00000479537 MAP2K5Q13163 448 aa11.12□□□□□ -0.63
BRAF-203ENST00000479537 HIC1Q14526 733 aa11.12□□□□□ -0.63
BRAF-203ENST00000479537 DOK7Q18PE1 504 aa11.12□□□□□ -0.63
BRAF-203ENST00000479537 SLC34A2O95436 690 aa11.11□□□□□ -0.63
BRAF-203ENST00000479537 CCDC102AQ96A19 550 aa11.11□□□□□ -0.63
BRAF-203ENST00000479537 KDM4CQ9H3R0 1056 aa11.11□□□□□ -0.63
BRAF-203ENST00000479537 SNPHO15079 494 aa11.1□□□□□ -0.63
BRAF-203ENST00000479537 ZNF710Q8N1W2 664 aa11.1□□□□□ -0.63
BRAF-203ENST00000479537 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
BRAF-203ENST00000479537 MAP3K7O43318 606 aa11.08□□□□□ -0.64
BRAF-203ENST00000479537 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
BRAF-203ENST00000479537 C14orf37Q86TY3 774 aa11.08□□□□□ -0.64
BRAF-203ENST00000479537 IL27Q8NEV9 243 aa11.08□□□□□ -0.64
BRAF-203ENST00000479537 PCDHGA4Q9Y5G9 962 aa11.08□□□□□ -0.64
BRAF-203ENST00000479537 IRF6O14896 467 aa11.07□□□□□ -0.64
BRAF-203ENST00000479537 RIMBP2O15034 1052 aa11.07□□□□□ -0.64
BRAF-203ENST00000479537 RBM33Q96EV2 1170 aaKnown RBP11.07□□□□□ -0.64
BRAF-203ENST00000479537 EPAS1Q99814 870 aa11.07□□□□□ -0.64
BRAF-203ENST00000479537 PHF14O94880 888 aa11.06□□□□□ -0.64
BRAF-203ENST00000479537 FECHP22830 423 aa11.06□□□□□ -0.64
BRAF-203ENST00000479537 ARSIQ5FYB1 569 aa11.06□□□□□ -0.64
BRAF-203ENST00000479537 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
BRAF-203ENST00000479537 PTGDRQ13258 359 aa11.05□□□□□ -0.64
BRAF-203ENST00000479537 KHSRPQ92945 711 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms