RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 WRNQ14191 1432 aaPredicted RBP eCLIP11.25□□□□□ -0.61
LINC00173-202ENST00000477702 PYGBP11216 843 aa11.24□□□□□ -0.61
LINC00173-202ENST00000477702 RNF25Q96BH1 459 aaPredicted RBP11.24□□□□□ -0.61
LINC00173-202ENST00000477702 TTBK1Q5TCY1 1321 aaPredicted RBP11.23□□□□□ -0.61
LINC00173-202ENST00000477702 COL17A1Q9UMD9 1497 aaPredicted RBP11.21□□□□□ -0.61
LINC00173-202ENST00000477702 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
LINC00173-202ENST00000477702 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
LINC00173-202ENST00000477702 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
LINC00173-202ENST00000477702 PPRC1Q5VV67 1664 aaKnown RBP11.18□□□□□ -0.62
LINC00173-202ENST00000477702 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
LINC00173-202ENST00000477702 CD44P16070 742 aaKnown RBP11.16□□□□□ -0.62
LINC00173-202ENST00000477702 ASXL2Q76L83 1435 aa11.16□□□□□ -0.62
LINC00173-202ENST00000477702 CHRM1P11229 460 aaPredicted RBP11.15□□□□□ -0.62
LINC00173-202ENST00000477702 PTPRGP23470 1445 aa11.14□□□□□ -0.63
LINC00173-202ENST00000477702 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
LINC00173-202ENST00000477702 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
LINC00173-202ENST00000477702 GLI2P10070 1586 aa11.12□□□□□ -0.63
LINC00173-202ENST00000477702 ILDR2Q71H61 639 aa11.12□□□□□ -0.63
LINC00173-202ENST00000477702 ABCC2Q92887 1545 aa11.11□□□□□ -0.63
LINC00173-202ENST00000477702 RIOK3O14730 519 aaKnown RBP11.11□□□□□ -0.63
LINC00173-202ENST00000477702 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
LINC00173-202ENST00000477702 TOP2BQ02880 1626 aa11.1□□□□□ -0.63
LINC00173-202ENST00000477702 C19orf67A6NJJ6 358 aa11.1□□□□□ -0.63
LINC00173-202ENST00000477702 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
LINC00173-202ENST00000477702 KIAA0586Q9BVV6 1533 aa11.09□□□□□ -0.63
LINC00173-202ENST00000477702 SOCS7O14512 581 aa11.09□□□□□ -0.63
LINC00173-202ENST00000477702 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
LINC00173-202ENST00000477702 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
LINC00173-202ENST00000477702 PCDHB8Q9UN66 801 aa11.08□□□□□ -0.64
LINC00173-202ENST00000477702 PCDHB13Q9Y5F0 798 aa11.08□□□□□ -0.64
LINC00173-202ENST00000477702 TEX14Q8IWB6 1497 aa11.07□□□□□ -0.64
LINC00173-202ENST00000477702 EPRSP07814 1512 aaKnown RBP11.07□□□□□ -0.64
LINC00173-202ENST00000477702 DISP3Q9P2K9 1392 aa11.06□□□□□ -0.64
LINC00173-202ENST00000477702 CUL7Q14999 1698 aa11.06□□□□□ -0.64
LINC00173-202ENST00000477702 MAP3K13O43283 966 aa11.06□□□□□ -0.64
LINC00173-202ENST00000477702 EVX2Q03828 476 aa11.06□□□□□ -0.64
LINC00173-202ENST00000477702 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
LINC00173-202ENST00000477702 MAP3K4Q9Y6R4 1608 aa11.06□□□□□ -0.64
LINC00173-202ENST00000477702 TNIKQ9UKE5 1360 aa11.04□□□□□ -0.64
LINC00173-202ENST00000477702 HAX1O00165 279 aa11.03□□□□□ -0.64
LINC00173-202ENST00000477702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
LINC00173-202ENST00000477702 VGFO15240 615 aaPredicted RBP11.02□□□□□ -0.65
LINC00173-202ENST00000477702 IFNL1Q8IU54 200 aa11.02□□□□□ -0.65
LINC00173-202ENST00000477702 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
LINC00173-202ENST00000477702 KIF21BO75037 1637 aa11.02□□□□□ -0.65
LINC00173-202ENST00000477702 CARMIL2Q6F5E8 1435 aa11.01□□□□□ -0.65
LINC00173-202ENST00000477702 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
LINC00173-202ENST00000477702 UHRF1BP1LA0JNW5 1464 aa11.01□□□□□ -0.65
LINC00173-202ENST00000477702 HS6ST3Q8IZP7 471 aa11□□□□□ -0.65
LINC00173-202ENST00000477702 PTPRMP28827 1452 aa11□□□□□ -0.65
LINC00173-202ENST00000477702 STK25O00506 426 aa10.99□□□□□ -0.65
LINC00173-202ENST00000477702 ZNF579Q8NAF0 562 aaKnown RBP10.99□□□□□ -0.65
LINC00173-202ENST00000477702 BBXQ8WY36 941 aaPredicted RBP10.99□□□□□ -0.65
LINC00173-202ENST00000477702 IGF1RP08069 1367 aa10.99□□□□□ -0.65
LINC00173-202ENST00000477702 POTEHQ6S545 545 aa10.98□□□□□ -0.65
LINC00173-202ENST00000477702 ZNF467Q7Z7K2 595 aaPredicted RBP10.98□□□□□ -0.65
LINC00173-202ENST00000477702 KDM5BQ9UGL1 1544 aa10.98□□□□□ -0.65
LINC00173-202ENST00000477702 HSPA2P54652 639 aa10.97□□□□□ -0.65
LINC00173-202ENST00000477702 CERKQ8TCT0 537 aa10.97□□□□□ -0.65
LINC00173-202ENST00000477702 ZCCHC11Q5TAX3 1644 aaKnown RBP10.96□□□□□ -0.65
LINC00173-202ENST00000477702 PLCB2Q00722 1185 aa10.96□□□□□ -0.65
LINC00173-202ENST00000477702 KCNH8Q96L42 1107 aa10.96□□□□□ -0.65
LINC00173-202ENST00000477702 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.65
LINC00173-202ENST00000477702 PCF11O94913 1555 aaKnown RBP10.95□□□□□ -0.66
LINC00173-202ENST00000477702 CD109Q6YHK3 1445 aa10.95□□□□□ -0.66
LINC00173-202ENST00000477702 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
LINC00173-202ENST00000477702 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
LINC00173-202ENST00000477702 WDR7Q9Y4E6 1490 aa10.94□□□□□ -0.66
LINC00173-202ENST00000477702 SLC24A1O60721 1099 aa10.94□□□□□ -0.66
LINC00173-202ENST00000477702 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
LINC00173-202ENST00000477702 SGIP1Q9BQI5 828 aa10.94□□□□□ -0.66
LINC00173-202ENST00000477702 TAOK2Q9UL54 1235 aa10.94□□□□□ -0.66
LINC00173-202ENST00000477702 TRPC6Q9Y210 931 aa10.94□□□□□ -0.66
LINC00173-202ENST00000477702 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
LINC00173-202ENST00000477702 PSEN1P49768 467 aa10.93□□□□□ -0.66
LINC00173-202ENST00000477702 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
LINC00173-202ENST00000477702 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
LINC00173-202ENST00000477702 PAXIP1Q6ZW49 1069 aaPredicted RBP10.92□□□□□ -0.66
LINC00173-202ENST00000477702 MAGI3Q5TCQ9 1506 aa10.92□□□□□ -0.66
LINC00173-202ENST00000477702 DISP1Q96F81 1524 aa10.92□□□□□ -0.66
LINC00173-202ENST00000477702 IQGAP2Q13576 1575 aa10.91□□□□□ -0.66
LINC00173-202ENST00000477702 ARID4BQ4LE39 1312 aaPredicted RBP10.91□□□□□ -0.66
LINC00173-202ENST00000477702 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
LINC00173-202ENST00000477702 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.91□□□□□ -0.66
LINC00173-202ENST00000477702 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
LINC00173-202ENST00000477702 CARMIL1Q5VZK9 1371 aa10.9□□□□□ -0.66
LINC00173-202ENST00000477702 MADDQ8WXG6 1647 aa10.88□□□□□ -0.67
LINC00173-202ENST00000477702 GALR2O43603 387 aaPredicted RBP10.88□□□□□ -0.67
LINC00173-202ENST00000477702 RAPGEF3O95398 923 aa10.87□□□□□ -0.67
LINC00173-202ENST00000477702 CFAP43Q8NDM7 1665 aa10.87□□□□□ -0.67
LINC00173-202ENST00000477702 SPATA31D1Q6ZQQ2 1576 aa10.86□□□□□ -0.67
LINC00173-202ENST00000477702 ARAP3Q8WWN8 1544 aa10.85□□□□□ -0.67
LINC00173-202ENST00000477702 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
LINC00173-202ENST00000477702 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
LINC00173-202ENST00000477702 ARID3CA6NKF2 412 aa10.83□□□□□ -0.68
LINC00173-202ENST00000477702 HAP1P54257 671 aaPredicted RBP10.83□□□□□ -0.68
LINC00173-202ENST00000477702 RIMS1Q86UR5 1692 aaKnown RBP10.82□□□□□ -0.68
LINC00173-202ENST00000477702 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
LINC00173-202ENST00000477702 KIAA0556O60303 1618 aa10.82□□□□□ -0.68
LINC00173-202ENST00000477702 UGGT2Q9NYU1 1516 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms