RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SHANK2Q9UPX8 1470 aa18.51■□□□□ 0.55
PRPF39-203ENST00000477626 ABCC5O15440 1437 aa18.51■□□□□ 0.55
PRPF39-203ENST00000477626 MBD5Q9P267 1494 aa18.51■□□□□ 0.55
PRPF39-203ENST00000477626 DAPK1P53355 1430 aa18.51■□□□□ 0.55
PRPF39-203ENST00000477626 SETD5Q9C0A6 1442 aa18.48■□□□□ 0.55
PRPF39-203ENST00000477626 ROCK1Q13464 1354 aa18.48■□□□□ 0.55
PRPF39-203ENST00000477626 RAB3GAP2Q9H2M9 1393 aa18.48■□□□□ 0.55
PRPF39-203ENST00000477626 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
PRPF39-203ENST00000477626 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
PRPF39-203ENST00000477626 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
PRPF39-203ENST00000477626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
PRPF39-203ENST00000477626 PLXNC1O60486 1568 aa18.43■□□□□ 0.54
PRPF39-203ENST00000477626 ABCC1P33527 1531 aa18.42■□□□□ 0.54
PRPF39-203ENST00000477626 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
PRPF39-203ENST00000477626 HNRNPUL2Q1KMD3 747 aaKnown RBP18.4■□□□□ 0.54
PRPF39-203ENST00000477626 CLSPNQ9HAW4 1339 aa18.4■□□□□ 0.54
PRPF39-203ENST00000477626 WDR7Q9Y4E6 1490 aa18.4■□□□□ 0.54
PRPF39-203ENST00000477626 KDM5DQ9BY66 1539 aa18.39■□□□□ 0.53
PRPF39-203ENST00000477626 MAP3K4Q9Y6R4 1608 aa18.37■□□□□ 0.53
PRPF39-203ENST00000477626 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
PRPF39-203ENST00000477626 ATP1B4Q9UN42 357 aaPredicted RBP18.35■□□□□ 0.53
PRPF39-203ENST00000477626 ZNF644Q9H582 1327 aaPredicted RBP18.35■□□□□ 0.53
PRPF39-203ENST00000477626 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
PRPF39-203ENST00000477626 PLCH2O75038 1416 aa18.34■□□□□ 0.53
PRPF39-203ENST00000477626 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
PRPF39-203ENST00000477626 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
PRPF39-203ENST00000477626 NCOA1Q15788 1441 aa18.34■□□□□ 0.53
PRPF39-203ENST00000477626 UNC13BO14795 1591 aa18.34■□□□□ 0.53
PRPF39-203ENST00000477626 SYCP2Q9BX26 1530 aa18.33■□□□□ 0.53
PRPF39-203ENST00000477626 PPRC1Q5VV67 1664 aaKnown RBP18.32■□□□□ 0.52
PRPF39-203ENST00000477626 CDK11AQ9UQ88 783 aaPredicted RBP18.31■□□□□ 0.52
PRPF39-203ENST00000477626 GLI2P10070 1586 aa18.31■□□□□ 0.52
PRPF39-203ENST00000477626 MAGI2Q86UL8 1455 aa18.31■□□□□ 0.52
PRPF39-203ENST00000477626 DEPDC5O75140 1603 aa18.3■□□□□ 0.52
PRPF39-203ENST00000477626 ARID3CA6NKF2 412 aa18.29■□□□□ 0.52
PRPF39-203ENST00000477626 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
PRPF39-203ENST00000477626 ASXL2Q76L83 1435 aa18.28■□□□□ 0.52
PRPF39-203ENST00000477626 PZPP20742 1482 aa18.27■□□□□ 0.52
PRPF39-203ENST00000477626 CCDC141Q6ZP82 1450 aa18.27■□□□□ 0.52
PRPF39-203ENST00000477626 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.52
PRPF39-203ENST00000477626 PLEKHD1A6NEE1 506 aa18.25■□□□□ 0.51
PRPF39-203ENST00000477626 KDM5CP41229 1560 aa18.25■□□□□ 0.51
PRPF39-203ENST00000477626 FAM50AQ14320 339 aaKnown RBP18.24■□□□□ 0.51
PRPF39-203ENST00000477626 ARHGAP5Q13017 1502 aa18.24■□□□□ 0.51
PRPF39-203ENST00000477626 CFAP74Q9C0B2 1584 aa18.24■□□□□ 0.51
PRPF39-203ENST00000477626 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
PRPF39-203ENST00000477626 C9orf84Q5VXU9 1444 aa18.22■□□□□ 0.51
PRPF39-203ENST00000477626 IQGAP3Q86VI3 1631 aa18.22■□□□□ 0.51
PRPF39-203ENST00000477626 KIDINS220Q9ULH0 1771 aa18.22■□□□□ 0.51
PRPF39-203ENST00000477626 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.51
PRPF39-203ENST00000477626 RICTORQ6R327 1708 aa18.21■□□□□ 0.51
PRPF39-203ENST00000477626 DIP2BQ9P265 1576 aa18.2■□□□□ 0.5
PRPF39-203ENST00000477626 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
PRPF39-203ENST00000477626 MROH1Q8NDA8 1641 aa18.2■□□□□ 0.5
PRPF39-203ENST00000477626 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
PRPF39-203ENST00000477626 FRMPD1Q5SYB0 1578 aa18.18■□□□□ 0.5
PRPF39-203ENST00000477626 EIF2AK4Q9P2K8 1649 aaKnown RBP18.18■□□□□ 0.5
PRPF39-203ENST00000477626 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-203ENST00000477626 RTEL1-TNFRSF6BF6WH68 1400 aa18.14■□□□□ 0.49
PRPF39-203ENST00000477626 TRAPPC8Q9Y2L5 1435 aa18.14■□□□□ 0.49
PRPF39-203ENST00000477626 DUOX2Q9NRD8 1548 aa18.12■□□□□ 0.49
PRPF39-203ENST00000477626 RNF17Q9BXT8 1623 aaKnown RBP18.12■□□□□ 0.49
PRPF39-203ENST00000477626 FANCAO15360 1455 aa18.11■□□□□ 0.49
PRPF39-203ENST00000477626 ITGAEP38570 1179 aa18.1■□□□□ 0.49
PRPF39-203ENST00000477626 ERBINQ96RT1 1412 aa18.09■□□□□ 0.49
PRPF39-203ENST00000477626 TEX14Q8IWB6 1497 aa18.08■□□□□ 0.49
PRPF39-203ENST00000477626 ATP7AQ04656 1500 aa18.08■□□□□ 0.49
PRPF39-203ENST00000477626 ABCA6Q8N139 1617 aa18.07■□□□□ 0.48
PRPF39-203ENST00000477626 PRDM15P57071 1507 aaPredicted RBP18.07■□□□□ 0.48
PRPF39-203ENST00000477626 ANKRD50Q9ULJ7 1429 aa18.07■□□□□ 0.48
PRPF39-203ENST00000477626 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
PRPF39-203ENST00000477626 ANKRD30AQ9BXX3 1397 aa18.06■□□□□ 0.48
PRPF39-203ENST00000477626 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
PRPF39-203ENST00000477626 ZMYM4Q5VZL5 1548 aa18.05■□□□□ 0.48
PRPF39-203ENST00000477626 NEO1Q92859 1461 aa18.05■□□□□ 0.48
PRPF39-203ENST00000477626 E9PCH4 1651 aa18.04■□□□□ 0.48
PRPF39-203ENST00000477626 RSPH4AQ5TD94 716 aa18.04■□□□□ 0.48
PRPF39-203ENST00000477626 RPRD2Q5VT52 1461 aaKnown RBP18.04■□□□□ 0.48
PRPF39-203ENST00000477626 HECW2Q9P2P5 1572 aa18.03■□□□□ 0.48
PRPF39-203ENST00000477626 RRP7BPQ9NSQ0 103 aa18.03■□□□□ 0.48
PRPF39-203ENST00000477626 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
PRPF39-203ENST00000477626 ATP10AO60312 1499 aa18.02■□□□□ 0.48
PRPF39-203ENST00000477626 ACIN1Q9UKV3 1341 aaKnown RBP18.02■□□□□ 0.48
PRPF39-203ENST00000477626 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.48
PRPF39-203ENST00000477626 KIF15Q9NS87 1388 aa18.02■□□□□ 0.47
PRPF39-203ENST00000477626 HNRNPMP52272 730 aaKnown RBP eCLIP18.01■□□□□ 0.47
PRPF39-203ENST00000477626 MLH3Q9UHC1 1453 aa18.01■□□□□ 0.47
PRPF39-203ENST00000477626 ADGRL1O94910 1474 aa18■□□□□ 0.47
PRPF39-203ENST00000477626 TET3O43151 1660 aa18■□□□□ 0.47
PRPF39-203ENST00000477626 CHIC2Q9UKJ5 165 aa17.99■□□□□ 0.47
PRPF39-203ENST00000477626 PLA2R1Q13018 1463 aa17.99■□□□□ 0.47
PRPF39-203ENST00000477626 DIP2CQ9Y2E4 1556 aa17.98■□□□□ 0.47
PRPF39-203ENST00000477626 NEURL4Q96JN8 1562 aa17.98■□□□□ 0.47
PRPF39-203ENST00000477626 TIMELESSQ9UNS1 1208 aa17.97■□□□□ 0.47
PRPF39-203ENST00000477626 LMTK2Q8IWU2 1503 aa17.97■□□□□ 0.47
PRPF39-203ENST00000477626 REREQ9P2R6 1566 aa17.97■□□□□ 0.47
PRPF39-203ENST00000477626 ZNF518AQ6AHZ1 1483 aa17.97■□□□□ 0.47
PRPF39-203ENST00000477626 POLR1AO95602 1720 aaPredicted RBP17.96■□□□□ 0.47
PRPF39-203ENST00000477626 CEP152O94986 1710 aa17.96■□□□□ 0.47
PRPF39-203ENST00000477626 SPHKAPQ2M3C7 1700 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms