RNA–Protein interactions for RNA: ENST00000475553.1

USP37-208, Transcript of ubiquitin specific peptidase 37, human

TSL 4

Gene USP37, Length 613 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP37-208	ENST00000475553	BOLA1	Q9Y3E2	137 aa		12.73	□□□□□ -0.37
USP37-208	ENST00000475553	C7	P10643	843 aa		12.72	□□□□□ -0.37
USP37-208	ENST00000475553	E2F4	Q16254	413 aa		12.72	□□□□□ -0.37
USP37-208	ENST00000475553	MICALL2	Q8IY33	904 aa		12.72	□□□□□ -0.37
USP37-208	ENST00000475553	NCKAP5L	Q9HCH0	1330 aa		12.71	□□□□□ -0.37
USP37-208	ENST00000475553	DDX27	Q96GQ7	796 aa	Known RBP	12.71	□□□□□ -0.37
USP37-208	ENST00000475553	PELP1	Q8IZL8	1130 aa	Known RBP	12.7	□□□□□ -0.38
USP37-208	ENST00000475553	TMC2	Q8TDI7	906 aa		12.69	□□□□□ -0.38
USP37-208	ENST00000475553	CRISPLD2	Q9H0B8	497 aa		12.69	□□□□□ -0.38
USP37-208	ENST00000475553	KCNV2	Q8TDN2	545 aa		12.68	□□□□□ -0.38
USP37-208	ENST00000475553	METRN	Q9UJH8	293 aa		12.66	□□□□□ -0.38
USP37-208	ENST00000475553	MFSD10	Q14728	455 aa		12.64	□□□□□ -0.39
USP37-208	ENST00000475553	GPHN	Q9NQX3	736 aa	Predicted RBP	12.64	□□□□□ -0.39
USP37-208	ENST00000475553	COLQ	Q9Y215	455 aa	Predicted RBP	12.64	□□□□□ -0.39
USP37-208	ENST00000475553	ARHGEF1	Q92888	912 aa	Known RBP	12.63	□□□□□ -0.39
USP37-208	ENST00000475553	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.62	□□□□□ -0.39
USP37-208	ENST00000475553	PPP1R15B	Q5SWA1	713 aa		12.61	□□□□□ -0.39
USP37-208	ENST00000475553	TULP1	O00294	542 aa	Predicted RBP	12.58	□□□□□ -0.4
USP37-208	ENST00000475553	C3orf67	Q6ZVT6	689 aa		12.57	□□□□□ -0.4
USP37-208	ENST00000475553	POTEB2	H3BUK9	544 aa		12.55	□□□□□ -0.4
USP37-208	ENST00000475553	DSG2	Q14126	1118 aa		12.54	□□□□□ -0.4
USP37-208	ENST00000475553	C2orf72	A6NCS6	295 aa		12.53	□□□□□ -0.4
USP37-208	ENST00000475553	FOXK1	P85037	733 aa		12.53	□□□□□ -0.4
USP37-208	ENST00000475553	TPRN	Q4KMQ1	711 aa		12.53	□□□□□ -0.4
USP37-208	ENST00000475553	POTEF	A5A3E0	1075 aa		12.52	□□□□□ -0.41
USP37-208	ENST00000475553	CAMK2B	Q13554	666 aa		12.52	□□□□□ -0.41
USP37-208	ENST00000475553	PLPP6	Q8IY26	295 aa		12.51	□□□□□ -0.41
USP37-208	ENST00000475553	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.47	□□□□□ -0.41
USP37-208	ENST00000475553	KIF3C	O14782	793 aa		12.46	□□□□□ -0.41
USP37-208	ENST00000475553	PRKCSH	P14314	528 aa	Predicted RBP	12.46	□□□□□ -0.41
USP37-208	ENST00000475553	SMYD5	Q6GMV2	418 aa		12.46	□□□□□ -0.41
USP37-208	ENST00000475553	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.46	□□□□□ -0.41
USP37-208	ENST00000475553	SEMA3E	O15041	775 aa		12.43	□□□□□ -0.42
USP37-208	ENST00000475553	DPYSL4	O14531	572 aa		12.42	□□□□□ -0.42
USP37-208	ENST00000475553	TMEM92	Q6UXU6	159 aa		12.42	□□□□□ -0.42
USP37-208	ENST00000475553	MAP3K9	P80192	1104 aa		12.41	□□□□□ -0.42
USP37-208	ENST00000475553	EMILIN3	Q9NT22	766 aa		12.41	□□□□□ -0.42
USP37-208	ENST00000475553	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.39	□□□□□ -0.43
USP37-208	ENST00000475553	LMOD2	Q6P5Q4	547 aa		12.39	□□□□□ -0.43
USP37-208	ENST00000475553	TESPA1	A2RU30	521 aa	Predicted RBP	12.38	□□□□□ -0.43
USP37-208	ENST00000475553	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.38	□□□□□ -0.43
USP37-208	ENST00000475553	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.37	□□□□□ -0.43
USP37-208	ENST00000475553	POTEJ	P0CG39	1038 aa		12.36	□□□□□ -0.43
USP37-208	ENST00000475553	TBC1D12	O60347	775 aa		12.35	□□□□□ -0.43
USP37-208	ENST00000475553	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.33	□□□□□ -0.44
USP37-208	ENST00000475553	PDIA6	Q15084	440 aa		12.32	□□□□□ -0.44
USP37-208	ENST00000475553	MAMSTR	Q6ZN01	415 aa		12.32	□□□□□ -0.44
USP37-208	ENST00000475553	LCE2D	Q5TA82	110 aa	Predicted RBP	12.31	□□□□□ -0.44
USP37-208	ENST00000475553	FAM163A	Q96GL9	167 aa	Predicted RBP	12.31	□□□□□ -0.44
USP37-208	ENST00000475553	SCUBE2	Q9NQ36	999 aa		12.31	□□□□□ -0.44
USP37-208	ENST00000475553	OXER1	Q8TDS5	423 aa		12.3	□□□□□ -0.44
USP37-208	ENST00000475553	MLLT3	P42568	568 aa	Predicted RBP	12.27	□□□□□ -0.45
USP37-208	ENST00000475553	SLAIN1	Q8ND83	568 aa		12.26	□□□□□ -0.45
USP37-208	ENST00000475553	SLC34A2	O95436	690 aa		12.25	□□□□□ -0.45
USP37-208	ENST00000475553	GRXCR2	A6NFK2	248 aa		12.24	□□□□□ -0.45
USP37-208	ENST00000475553	EVI5	O60447	810 aa		12.24	□□□□□ -0.45
USP37-208	ENST00000475553	PTCD2	Q8WV60	388 aa	Known RBP	12.24	□□□□□ -0.45
USP37-208	ENST00000475553	RIMBP2	O15034	1052 aa		12.2	□□□□□ -0.46
USP37-208	ENST00000475553	DOK7	Q18PE1	504 aa		12.2	□□□□□ -0.46
USP37-208	ENST00000475553	RBM26	Q5T8P6	1007 aa	Known RBP	12.19	□□□□□ -0.46
USP37-208	ENST00000475553	GPIHBP1	Q8IV16	184 aa		12.18	□□□□□ -0.46
USP37-208	ENST00000475553	ZC3H15	Q8WU90	426 aa	Known RBP	12.18	□□□□□ -0.46
USP37-208	ENST00000475553	DDX12P	Q92771	950 aa		12.18	□□□□□ -0.46
USP37-208	ENST00000475553	PCDHGA4	Q9Y5G9	962 aa		12.17	□□□□□ -0.46
USP37-208	ENST00000475553	ZNF710	Q8N1W2	664 aa		12.16	□□□□□ -0.46
USP37-208	ENST00000475553	PTGER2	P43116	358 aa		12.15	□□□□□ -0.46
USP37-208	ENST00000475553	CDAN1	Q8IWY9	1227 aa		12.14	□□□□□ -0.47
USP37-208	ENST00000475553	NUTM2F	A1L443	756 aa		12.13	□□□□□ -0.47
USP37-208	ENST00000475553	SNPH	O15079	494 aa		12.13	□□□□□ -0.47
USP37-208	ENST00000475553	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.11	□□□□□ -0.47
USP37-208	ENST00000475553	KRI1	Q8N9T8	703 aa	Known RBP	12.09	□□□□□ -0.47
USP37-208	ENST00000475553	ZSWIM6	Q9HCJ5	1215 aa		12.09	□□□□□ -0.47
USP37-208	ENST00000475553	OSBP	P22059	807 aa		12.08	□□□□□ -0.48
USP37-208	ENST00000475553	EPAS1	Q99814	870 aa		12.08	□□□□□ -0.48
USP37-208	ENST00000475553	PHF14	O94880	888 aa		12.07	□□□□□ -0.48
USP37-208	ENST00000475553	ARSI	Q5FYB1	569 aa		12.07	□□□□□ -0.48
USP37-208	ENST00000475553	ZMYND10	O75800	440 aa		12.06	□□□□□ -0.48
USP37-208	ENST00000475553	HOXB3	P14651	431 aa	Predicted RBP	12.06	□□□□□ -0.48
USP37-208	ENST00000475553	NUDT7	P0C024	238 aa		12.05	□□□□□ -0.48
USP37-208	ENST00000475553	MAP3K7	O43318	606 aa		12.03	□□□□□ -0.48
USP37-208	ENST00000475553	BARGIN	Q6ZT62	677 aa		12.03	□□□□□ -0.48
USP37-208	ENST00000475553	SLC24A3	Q9HC58	644 aa		12.03	□□□□□ -0.48
USP37-208	ENST00000475553	FCHSD2	O94868	740 aa		12.02	□□□□□ -0.49
USP37-208	ENST00000475553	TYW1B	Q6NUM6	668 aa		12.02	□□□□□ -0.49
USP37-208	ENST00000475553	RBM33	Q96EV2	1170 aa	Known RBP	12.02	□□□□□ -0.49
USP37-208	ENST00000475553	FBXW7	Q969H0	707 aa		12.01	□□□□□ -0.49
USP37-208	ENST00000475553	JPH4	Q96JJ6	628 aa		12.01	□□□□□ -0.49
USP37-208	ENST00000475553	ZNF454	Q8N9F8	522 aa		12	□□□□□ -0.49
USP37-208	ENST00000475553	KHSRP	Q92945	711 aa	Known RBP eCLIP	12	□□□□□ -0.49
USP37-208	ENST00000475553	PCDHGA10	Q9Y5H3	936 aa		12	□□□□□ -0.49
USP37-208	ENST00000475553	EN1	Q05925	392 aa	Predicted RBP	11.99	□□□□□ -0.49
USP37-208	ENST00000475553	GPR153	Q6NV75	609 aa		11.99	□□□□□ -0.49
USP37-208	ENST00000475553	HIC1	Q14526	733 aa		11.97	□□□□□ -0.49
USP37-208	ENST00000475553	AK7	Q96M32	723 aa		11.97	□□□□□ -0.49
USP37-208	ENST00000475553	KDM4F	A0A1W2PPD8	638 aa		11.96	□□□□□ -0.49
USP37-208	ENST00000475553	PSD	A5PKW4	1024 aa	Predicted RBP	11.96	□□□□□ -0.49
USP37-208	ENST00000475553	GNPAT	O15228	680 aa		11.96	□□□□□ -0.49
USP37-208	ENST00000475553	FOSB	P53539	338 aa		11.96	□□□□□ -0.49
USP37-208	ENST00000475553	ZDHHC16	Q969W1	377 aa		11.95	□□□□□ -0.5
USP37-208	ENST00000475553	PRIM1	P49642	420 aa	Known RBP	11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms