RNA–Protein interactions for RNA: ENST00000474846.5

GPD1L-206, Transcript of glycerol-3-phosphate dehydrogenase 1 like, humanhuman

TSL 2

Gene GPD1L, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1L-206ENST00000474846 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
GPD1L-206ENST00000474846 RRP7BPQ9NSQ0 103 aa11.82□□□□□ -0.52
GPD1L-206ENST00000474846 ZNF644Q9H582 1327 aaPredicted RBP11.81□□□□□ -0.52
GPD1L-206ENST00000474846 LRRIQ1Q96JM4 1722 aa11.81□□□□□ -0.52
GPD1L-206ENST00000474846 CCDC18Q5T9S5 1454 aa11.81□□□□□ -0.52
GPD1L-206ENST00000474846 CD109Q6YHK3 1445 aa11.81□□□□□ -0.52
GPD1L-206ENST00000474846 MAPKBP1O60336 1514 aa11.8□□□□□ -0.52
GPD1L-206ENST00000474846 AFAP1Q8N556 730 aa11.8□□□□□ -0.52
GPD1L-206ENST00000474846 ABCC2Q92887 1545 aa11.8□□□□□ -0.52
GPD1L-206ENST00000474846 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
GPD1L-206ENST00000474846 EPRSP07814 1512 aaKnown RBP11.8□□□□□ -0.52
GPD1L-206ENST00000474846 LRRC9Q6ZRR7 1453 aa11.79□□□□□ -0.52
GPD1L-206ENST00000474846 EIF5BO60841 1220 aaKnown RBP11.79□□□□□ -0.52
GPD1L-206ENST00000474846 NUP153P49790 1475 aaKnown RBP11.77□□□□□ -0.52
GPD1L-206ENST00000474846 GGT6Q6P531 493 aa11.77□□□□□ -0.53
GPD1L-206ENST00000474846 TROQ12816 1431 aaPredicted RBP11.76□□□□□ -0.53
GPD1L-206ENST00000474846 SPAG9O60271 1321 aaKnown RBP11.76□□□□□ -0.53
GPD1L-206ENST00000474846 FYCO1Q9BQS8 1478 aa11.75□□□□□ -0.53
GPD1L-206ENST00000474846 PHLDB1Q86UU1 1377 aa11.74□□□□□ -0.53
GPD1L-206ENST00000474846 WDR7Q9Y4E6 1490 aa11.74□□□□□ -0.53
GPD1L-206ENST00000474846 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
GPD1L-206ENST00000474846 RAPGEF6Q8TEU7 1601 aa11.73□□□□□ -0.53
GPD1L-206ENST00000474846 FKBP8Q14318 412 aa11.73□□□□□ -0.53
GPD1L-206ENST00000474846 SAMD9Q5K651 1589 aa11.73□□□□□ -0.53
GPD1L-206ENST00000474846 NEFLP07196 543 aa11.71□□□□□ -0.53
GPD1L-206ENST00000474846 ARHGAP5Q13017 1502 aa11.71□□□□□ -0.54
GPD1L-206ENST00000474846 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
GPD1L-206ENST00000474846 SCAPERQ9BY12 1400 aa11.7□□□□□ -0.54
GPD1L-206ENST00000474846 RAB3GAP2Q9H2M9 1393 aa11.7□□□□□ -0.54
GPD1L-206ENST00000474846 KIF3BO15066 747 aa11.7□□□□□ -0.54
GPD1L-206ENST00000474846 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
GPD1L-206ENST00000474846 SENP3Q9H4L4 574 aaPredicted RBP11.69□□□□□ -0.54
GPD1L-206ENST00000474846 NCOA2Q15596 1464 aa11.68□□□□□ -0.54
GPD1L-206ENST00000474846 KDM5BQ9UGL1 1544 aa11.67□□□□□ -0.54
GPD1L-206ENST00000474846 STAG3Q9UJ98 1225 aa11.67□□□□□ -0.54
GPD1L-206ENST00000474846 UHRF1BP1LA0JNW5 1464 aa11.66□□□□□ -0.54
GPD1L-206ENST00000474846 ABCA8O94911 1581 aa11.65□□□□□ -0.54
GPD1L-206ENST00000474846 ADCY10Q96PN6 1610 aa11.65□□□□□ -0.54
GPD1L-206ENST00000474846 RSPH4AQ5TD94 716 aa11.65□□□□□ -0.55
GPD1L-206ENST00000474846 FANCAO15360 1455 aa11.64□□□□□ -0.55
GPD1L-206ENST00000474846 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
GPD1L-206ENST00000474846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.63□□□□□ -0.55
GPD1L-206ENST00000474846 SETD5Q9C0A6 1442 aa11.63□□□□□ -0.55
GPD1L-206ENST00000474846 ABCC10Q5T3U5 1492 aa11.63□□□□□ -0.55
GPD1L-206ENST00000474846 ADGRL1O94910 1474 aa11.62□□□□□ -0.55
GPD1L-206ENST00000474846 AKNAQ7Z591 1439 aa11.62□□□□□ -0.55
GPD1L-206ENST00000474846 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
GPD1L-206ENST00000474846 TSPOAP1O95153 1857 aa11.61□□□□□ -0.55
GPD1L-206ENST00000474846 TEX14Q8IWB6 1497 aa11.61□□□□□ -0.55
GPD1L-206ENST00000474846 ZCCHC11Q5TAX3 1644 aaKnown RBP11.6□□□□□ -0.55
GPD1L-206ENST00000474846 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
GPD1L-206ENST00000474846 PLCH2O75038 1416 aa11.6□□□□□ -0.55
GPD1L-206ENST00000474846 MAGI3Q5TCQ9 1506 aa11.59□□□□□ -0.55
GPD1L-206ENST00000474846 KIF14Q15058 1648 aa11.59□□□□□ -0.55
GPD1L-206ENST00000474846 EHBP1L1Q8N3D4 1523 aa11.59□□□□□ -0.55
GPD1L-206ENST00000474846 DDX10Q13206 875 aaKnown RBP11.59□□□□□ -0.55
GPD1L-206ENST00000474846 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
GPD1L-206ENST00000474846 DENND4BO75064 1496 aaPredicted RBP11.59□□□□□ -0.55
GPD1L-206ENST00000474846 RBM19Q9Y4C8 960 aaKnown RBP11.58□□□□□ -0.55
GPD1L-206ENST00000474846 PTPRKQ15262 1439 aa11.58□□□□□ -0.56
GPD1L-206ENST00000474846 FGD6Q6ZV73 1430 aa11.58□□□□□ -0.56
GPD1L-206ENST00000474846 ANKRD30AQ9BXX3 1397 aa11.58□□□□□ -0.56
GPD1L-206ENST00000474846 GPATCH8Q9UKJ3 1502 aaKnown RBP11.57□□□□□ -0.56
GPD1L-206ENST00000474846 HIRIP3Q9BW71 556 aaPredicted RBP11.56□□□□□ -0.56
GPD1L-206ENST00000474846 PTPN23Q9H3S7 1636 aa11.56□□□□□ -0.56
GPD1L-206ENST00000474846 ZNF326Q5BKZ1 582 aaKnown RBP11.55□□□□□ -0.56
GPD1L-206ENST00000474846 SUPT6HQ7KZ85 1726 aaKnown RBP11.55□□□□□ -0.56
GPD1L-206ENST00000474846 IRX6P78412 446 aaPredicted RBP11.54□□□□□ -0.56
GPD1L-206ENST00000474846 CEBPAP49715 358 aaPredicted RBP11.52□□□□□ -0.56
GPD1L-206ENST00000474846 TRAPPC8Q9Y2L5 1435 aa11.52□□□□□ -0.56
GPD1L-206ENST00000474846 GCC2Q8IWJ2 1684 aa11.52□□□□□ -0.57
GPD1L-206ENST00000474846 KANK1Q14678 1352 aa11.52□□□□□ -0.57
GPD1L-206ENST00000474846 KIF15Q9NS87 1388 aa11.52□□□□□ -0.57
GPD1L-206ENST00000474846 HFM1A2PYH4 1435 aa11.51□□□□□ -0.57
GPD1L-206ENST00000474846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.51□□□□□ -0.57
GPD1L-206ENST00000474846 FOXD1Q16676 465 aa11.51□□□□□ -0.57
GPD1L-206ENST00000474846 NUP155O75694 1391 aa11.51□□□□□ -0.57
GPD1L-206ENST00000474846 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
GPD1L-206ENST00000474846 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
GPD1L-206ENST00000474846 SIN3AQ96ST3 1273 aa11.5□□□□□ -0.57
GPD1L-206ENST00000474846 MIA2Q96PC5 1412 aa11.49□□□□□ -0.57
GPD1L-206ENST00000474846 NAIPQ13075 1403 aa11.49□□□□□ -0.57
GPD1L-206ENST00000474846 CAMSAP2Q08AD1 1489 aa11.49□□□□□ -0.57
GPD1L-206ENST00000474846 TCOF1Q13428 1488 aaKnown RBP11.49□□□□□ -0.57
GPD1L-206ENST00000474846 PPP1R15AO75807 674 aaPredicted RBP11.48□□□□□ -0.57
GPD1L-206ENST00000474846 KDM6BO15054 1643 aa11.48□□□□□ -0.57
GPD1L-206ENST00000474846 C9orf84Q5VXU9 1444 aa11.48□□□□□ -0.57
GPD1L-206ENST00000474846 PKD2Q13563 968 aa11.47□□□□□ -0.57
GPD1L-206ENST00000474846 KDM2AQ9Y2K7 1162 aa11.46□□□□□ -0.57
GPD1L-206ENST00000474846 SYCP2Q9BX26 1530 aa11.46□□□□□ -0.58
GPD1L-206ENST00000474846 POGZQ7Z3K3 1410 aa11.46□□□□□ -0.58
GPD1L-206ENST00000474846 TTC37Q6PGP7 1564 aa11.46□□□□□ -0.58
GPD1L-206ENST00000474846 CCDC141Q6ZP82 1450 aa11.45□□□□□ -0.58
GPD1L-206ENST00000474846 NEO1Q92859 1461 aa11.45□□□□□ -0.58
GPD1L-206ENST00000474846 ZNF518AQ6AHZ1 1483 aa11.45□□□□□ -0.58
GPD1L-206ENST00000474846 DIP2BQ9P265 1576 aa11.45□□□□□ -0.58
GPD1L-206ENST00000474846 ANP32CO43423 234 aa11.44□□□□□ -0.58
GPD1L-206ENST00000474846 TIMELESSQ9UNS1 1208 aa11.44□□□□□ -0.58
GPD1L-206ENST00000474846 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
GPD1L-206ENST00000474846 NUTM2DQ5VT03 806 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms