RNA–Protein interactions for RNA: ENST00000474706.6

PDPK1-210, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-210ENST00000474706 MAGI2Q86UL8 1455 aa21.6■■□□□ 1.05
PDPK1-210ENST00000474706 ZFYVE16Q7Z3T8 1539 aa21.6■■□□□ 1.05
PDPK1-210ENST00000474706 PREX2Q70Z35 1606 aa21.58■■□□□ 1.05
PDPK1-210ENST00000474706 SCAPERQ9BY12 1400 aa21.57■■□□□ 1.04
PDPK1-210ENST00000474706 ARHGAP5Q13017 1502 aa21.57■■□□□ 1.04
PDPK1-210ENST00000474706 CDC42BPBQ9Y5S2 1711 aa21.55■■□□□ 1.04
PDPK1-210ENST00000474706 EFCAB2Q5VUJ9 269 aa21.55■■□□□ 1.04
PDPK1-210ENST00000474706 HECW2Q9P2P5 1572 aa21.54■■□□□ 1.04
PDPK1-210ENST00000474706 MADDQ8WXG6 1647 aa21.54■■□□□ 1.04
PDPK1-210ENST00000474706 YEATS2Q9ULM3 1422 aa21.54■■□□□ 1.04
PDPK1-210ENST00000474706 KDM5CP41229 1560 aa21.53■■□□□ 1.04
PDPK1-210ENST00000474706 ZNF518AQ6AHZ1 1483 aa21.52■■□□□ 1.04
PDPK1-210ENST00000474706 SIGLEC1Q9BZZ2 1709 aa21.51■■□□□ 1.03
PDPK1-210ENST00000474706 PTPRMP28827 1452 aa21.51■■□□□ 1.03
PDPK1-210ENST00000474706 CDC42BPAQ5VT25 1732 aa21.5■■□□□ 1.03
PDPK1-210ENST00000474706 ABCC1P33527 1531 aa21.49■■□□□ 1.03
PDPK1-210ENST00000474706 CEP162Q5TB80 1403 aa21.48■■□□□ 1.03
PDPK1-210ENST00000474706 ARID4BQ4LE39 1312 aaPredicted RBP21.48■■□□□ 1.03
PDPK1-210ENST00000474706 ITSN2Q9NZM3 1697 aa21.47■■□□□ 1.03
PDPK1-210ENST00000474706 RIMS1Q86UR5 1692 aaKnown RBP21.45■■□□□ 1.02
PDPK1-210ENST00000474706 C9orf84Q5VXU9 1444 aa21.45■■□□□ 1.02
PDPK1-210ENST00000474706 ATP10AO60312 1499 aa21.44■■□□□ 1.02
PDPK1-210ENST00000474706 REREQ9P2R6 1566 aa21.41■■□□□ 1.02
PDPK1-210ENST00000474706 DIP2CQ9Y2E4 1556 aa21.41■■□□□ 1.02
PDPK1-210ENST00000474706 ARHGEF12Q9NZN5 1544 aa21.4■■□□□ 1.02
PDPK1-210ENST00000474706 MLH3Q9UHC1 1453 aa21.4■■□□□ 1.02
PDPK1-210ENST00000474706 FER1L4A9Z1Z3 1794 aa21.4■■□□□ 1.02
PDPK1-210ENST00000474706 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.02
PDPK1-210ENST00000474706 ABCA6Q8N139 1617 aa21.39■■□□□ 1.01
PDPK1-210ENST00000474706 SAMD9LQ8IVG5 1584 aa21.39■■□□□ 1.01
PDPK1-210ENST00000474706 GPATCH8Q9UKJ3 1502 aaKnown RBP21.39■■□□□ 1.01
PDPK1-210ENST00000474706 TRAPPC8Q9Y2L5 1435 aa21.37■■□□□ 1.01
PDPK1-210ENST00000474706 MTUS2Q5JR59 1369 aa21.36■■□□□ 1.01
PDPK1-210ENST00000474706 AFAP1Q8N556 730 aa21.36■■□□□ 1.01
PDPK1-210ENST00000474706 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
PDPK1-210ENST00000474706 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1.01
PDPK1-210ENST00000474706 TIAM1Q13009 1591 aa21.33■■□□□ 1.01
PDPK1-210ENST00000474706 PLEKHH2Q8IVE3 1493 aa21.32■■□□□ 1
PDPK1-210ENST00000474706 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
PDPK1-210ENST00000474706 AGLP35573 1532 aa21.3■■□□□ 1
PDPK1-210ENST00000474706 LMTK3Q96Q04 1460 aa21.3■■□□□ 1
PDPK1-210ENST00000474706 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
PDPK1-210ENST00000474706 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
PDPK1-210ENST00000474706 INO80Q9ULG1 1556 aaPredicted RBP21.27■□□□□ 0.99
PDPK1-210ENST00000474706 MLECQ14165 292 aa21.26■□□□□ 0.99
PDPK1-210ENST00000474706 SUPT6HQ7KZ85 1726 aaKnown RBP21.26■□□□□ 0.99
PDPK1-210ENST00000474706 ILDR1Q86SU0 546 aaPredicted RBP21.25■□□□□ 0.99
PDPK1-210ENST00000474706 CFDP1Q9UEE9 299 aaPredicted RBP21.25■□□□□ 0.99
PDPK1-210ENST00000474706 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
PDPK1-210ENST00000474706 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
PDPK1-210ENST00000474706 ZNF777Q9ULD5 760 aaPredicted RBP21.24■□□□□ 0.99
PDPK1-210ENST00000474706 NCOA2Q15596 1464 aa21.2■□□□□ 0.98
PDPK1-210ENST00000474706 PLXNC1O60486 1568 aa21.2■□□□□ 0.98
PDPK1-210ENST00000474706 PREX1Q8TCU6 1659 aa21.2■□□□□ 0.98
PDPK1-210ENST00000474706 LOC105371045A0A1W2PR82 267 aa21.19■□□□□ 0.98
PDPK1-210ENST00000474706 SPAG9O60271 1321 aaKnown RBP21.19■□□□□ 0.98
PDPK1-210ENST00000474706 HNRNPMP52272 730 aaKnown RBP eCLIP21.18■□□□□ 0.987e-8■■■■□ 26.6
PDPK1-210ENST00000474706 MBD5Q9P267 1494 aa21.17■□□□□ 0.98
PDPK1-210ENST00000474706 MAP3K1Q13233 1512 aa21.17■□□□□ 0.98
PDPK1-210ENST00000474706 C3P01024 1663 aa21.15■□□□□ 0.98
PDPK1-210ENST00000474706 ADGBQ8N7X0 1667 aa21.15■□□□□ 0.98
PDPK1-210ENST00000474706 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
PDPK1-210ENST00000474706 CAMSAP2Q08AD1 1489 aa21.13■□□□□ 0.97
PDPK1-210ENST00000474706 CNTLNQ9NXG0 1405 aa21.13■□□□□ 0.97
PDPK1-210ENST00000474706 MROH2AA6NES4 1674 aa21.13■□□□□ 0.97
PDPK1-210ENST00000474706 A2MP01023 1474 aa21.13■□□□□ 0.97
PDPK1-210ENST00000474706 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
PDPK1-210ENST00000474706 ZNF644Q9H582 1327 aaPredicted RBP21.11■□□□□ 0.97
PDPK1-210ENST00000474706 CCDC141Q6ZP82 1450 aa21.11■□□□□ 0.97
PDPK1-210ENST00000474706 RTEL1-TNFRSF6BF6WH68 1400 aa21.11■□□□□ 0.97
PDPK1-210ENST00000474706 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
PDPK1-210ENST00000474706 ARHGEF5Q12774 1597 aa21.09■□□□□ 0.97
PDPK1-210ENST00000474706 CEBPAP49715 358 aaPredicted RBP21.07■□□□□ 0.96
PDPK1-210ENST00000474706 UHRF1BP1Q6BDS2 1440 aa21.06■□□□□ 0.96
PDPK1-210ENST00000474706 HSPA2P54652 639 aa21.06■□□□□ 0.96
PDPK1-210ENST00000474706 ESF1Q9H501 851 aaKnown RBP21.05■□□□□ 0.96
PDPK1-210ENST00000474706 CLTCQ00610 1675 aaKnown RBP21.03■□□□□ 0.96
PDPK1-210ENST00000474706 RSPH4AQ5TD94 716 aa21.01■□□□□ 0.95
PDPK1-210ENST00000474706 NPATQ14207 1427 aa21.01■□□□□ 0.95
PDPK1-210ENST00000474706 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
PDPK1-210ENST00000474706 MIA2Q96PC5 1412 aa21■□□□□ 0.95
PDPK1-210ENST00000474706 MAST1Q9Y2H9 1570 aa20.99■□□□□ 0.95
PDPK1-210ENST00000474706 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
PDPK1-210ENST00000474706 DHX29Q7Z478 1369 aaKnown RBP20.98■□□□□ 0.95
PDPK1-210ENST00000474706 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
PDPK1-210ENST00000474706 STRCQ7RTU9 1775 aa20.97■□□□□ 0.95
PDPK1-210ENST00000474706 ZMYM3Q14202 1370 aa20.96■□□□□ 0.95
PDPK1-210ENST00000474706 PPP6R1Q9UPN7 881 aa20.95■□□□□ 0.94
PDPK1-210ENST00000474706 ZNF142P52746 1687 aaPredicted RBP20.95■□□□□ 0.94
PDPK1-210ENST00000474706 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
PDPK1-210ENST00000474706 GGT6Q6P531 493 aa20.92■□□□□ 0.94
PDPK1-210ENST00000474706 KDM5DQ9BY66 1539 aa20.92■□□□□ 0.94
PDPK1-210ENST00000474706 PTPRKQ15262 1439 aa20.91■□□□□ 0.94
PDPK1-210ENST00000474706 FBXO41Q8TF61 875 aa20.91■□□□□ 0.94
PDPK1-210ENST00000474706 CROCC2H7BZ55 1655 aa20.89■□□□□ 0.94
PDPK1-210ENST00000474706 RNF17Q9BXT8 1623 aaKnown RBP20.89■□□□□ 0.94
PDPK1-210ENST00000474706 EIF2AK4Q9P2K8 1649 aaKnown RBP20.89■□□□□ 0.94
PDPK1-210ENST00000474706 TSPY4P0CV99 314 aa20.89■□□□□ 0.93
PDPK1-210ENST00000474706 TSPY10P0CW01 314 aa20.89■□□□□ 0.93
PDPK1-210ENST00000474706 PTPN23Q9H3S7 1636 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms