RNA–Protein interactions for RNA: ENST00000473639.1

RND3-208, Transcript of Rho family GTPase 3, humanhuman

TSL 2

Gene RND3, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND3-208ENST00000473639 NKX1-1Q15270 411 aaPredicted RBP7.61□□□□□ -1.19
RND3-208ENST00000473639 HOXB3P14651 431 aaPredicted RBP7.59□□□□□ -1.19
RND3-208ENST00000473639 MMRN1Q13201 1228 aa7.59□□□□□ -1.19
RND3-208ENST00000473639 DNAJC5Q9H3Z4 198 aa7.58□□□□□ -1.2
RND3-208ENST00000473639 MARVELD3Q96A59 401 aa7.56□□□□□ -1.2
RND3-208ENST00000473639 C2orf72A6NCS6 295 aa7.53□□□□□ -1.2
RND3-208ENST00000473639 KIF3CO14782 793 aa7.52□□□□□ -1.21
RND3-208ENST00000473639 DOK7Q18PE1 504 aa7.52□□□□□ -1.21
RND3-208ENST00000473639 ZNF710Q8N1W2 664 aa7.52□□□□□ -1.21
RND3-208ENST00000473639 SPNS2Q8IVW8 549 aa7.51□□□□□ -1.21
RND3-208ENST00000473639 GTPBP6O43824 516 aaPredicted RBP7.5□□□□□ -1.21
RND3-208ENST00000473639 EMP3P54852 163 aa7.5□□□□□ -1.21
RND3-208ENST00000473639 HOXB1P14653 301 aaPredicted RBP7.49□□□□□ -1.21
RND3-208ENST00000473639 TMC2Q8TDI7 906 aa7.49□□□□□ -1.21
RND3-208ENST00000473639 RYDENQ9NUL5 291 aaKnown RBP7.48□□□□□ -1.21
RND3-208ENST00000473639 POTEB3A0JP26 581 aa7.47□□□□□ -1.21
RND3-208ENST00000473639 FAM205CA6NFA0 338 aa7.47□□□□□ -1.21
RND3-208ENST00000473639 RIMBP2O15034 1052 aa7.47□□□□□ -1.21
RND3-208ENST00000473639 POTEBQ6S5H4 581 aa7.47□□□□□ -1.21
RND3-208ENST00000473639 GPR153Q6NV75 609 aa7.45□□□□□ -1.22
RND3-208ENST00000473639 HS3ST6Q96QI5 342 aa7.45□□□□□ -1.22
RND3-208ENST00000473639 ZSWIM6Q9HCJ5 1215 aa7.45□□□□□ -1.22
RND3-208ENST00000473639 ARSIQ5FYB1 569 aa7.44□□□□□ -1.22
RND3-208ENST00000473639 KHSRPQ92945 711 aaKnown RBP eCLIP7.44□□□□□ -1.22
RND3-208ENST00000473639 GPHNQ9NQX3 736 aaPredicted RBP7.44□□□□□ -1.22
RND3-208ENST00000473639 ERBB3P21860 1342 aa7.42□□□□□ -1.22
RND3-208ENST00000473639 FOXK1P85037 733 aa7.41□□□□□ -1.22
RND3-208ENST00000473639 DSG2Q14126 1118 aa7.41□□□□□ -1.22
RND3-208ENST00000473639 PLPP6Q8IY26 295 aa7.41□□□□□ -1.22
RND3-208ENST00000473639 BBXQ8WY36 941 aaPredicted RBP7.41□□□□□ -1.22
RND3-208ENST00000473639 CRISPLD2Q9H0B8 497 aa7.4□□□□□ -1.22
RND3-208ENST00000473639 NCKAP5LQ9HCH0 1330 aa7.39□□□□□ -1.23
RND3-208ENST00000473639 SLC34A2O95436 690 aa7.39□□□□□ -1.23
RND3-208ENST00000473639 VARS2Q5ST30 1063 aaKnown RBP7.39□□□□□ -1.23
RND3-208ENST00000473639 PCDHGA4Q9Y5G9 962 aa7.39□□□□□ -1.23
RND3-208ENST00000473639 NUDT7P0C024 238 aa7.38□□□□□ -1.23
RND3-208ENST00000473639 CADPS2Q86UW7 1296 aa7.37□□□□□ -1.23
RND3-208ENST00000473639 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
RND3-208ENST00000473639 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
RND3-208ENST00000473639 PDE4AP27815 886 aa7.36□□□□□ -1.23
RND3-208ENST00000473639 ZNF316A6NFI3 1004 aaPredicted RBP7.35□□□□□ -1.23
RND3-208ENST00000473639 PTCD2Q8WV60 388 aaKnown RBP7.35□□□□□ -1.23
RND3-208ENST00000473639 PPP1R15BQ5SWA1 713 aa7.34□□□□□ -1.23
RND3-208ENST00000473639 LARP6Q9BRS8 491 aaKnown RBP7.34□□□□□ -1.23
RND3-208ENST00000473639 SPRYD3Q8NCJ5 442 aa7.33□□□□□ -1.24
RND3-208ENST00000473639 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.33□□□□□ -1.24
RND3-208ENST00000473639 LHX6Q9UPM6 363 aa7.33□□□□□ -1.24
RND3-208ENST00000473639 KDM4FA0A1W2PPD8 638 aa7.32□□□□□ -1.24
RND3-208ENST00000473639 ZNF687Q8N1G0 1237 aa7.32□□□□□ -1.24
RND3-208ENST00000473639 PAXIP1Q6ZW49 1069 aaPredicted RBP7.31□□□□□ -1.24
RND3-208ENST00000473639 OXER1Q8TDS5 423 aa7.31□□□□□ -1.24
RND3-208ENST00000473639 UPF1Q92900 1129 aaKnown RBP eCLIP7.31□□□□□ -1.24
RND3-208ENST00000473639 DDX27Q96GQ7 796 aaKnown RBP7.31□□□□□ -1.24
RND3-208ENST00000473639 MFSD10Q14728 455 aa7.3□□□□□ -1.24
RND3-208ENST00000473639 CFAP44Q96MT7 982 aa7.3□□□□□ -1.24
RND3-208ENST00000473639 TBC1D12O60347 775 aa7.28□□□□□ -1.24
RND3-208ENST00000473639 POTEEQ6S8J3 1075 aa7.26□□□□□ -1.25
RND3-208ENST00000473639 EMILIN3Q9NT22 766 aa7.26□□□□□ -1.25
RND3-208ENST00000473639 AXIN2Q9Y2T1 843 aa7.24□□□□□ -1.25
RND3-208ENST00000473639 PSDA5PKW4 1024 aaPredicted RBP7.22□□□□□ -1.25
RND3-208ENST00000473639 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
RND3-208ENST00000473639 EVI5O60447 810 aa7.21□□□□□ -1.26
RND3-208ENST00000473639 MAP3K9P80192 1104 aa7.21□□□□□ -1.26
RND3-208ENST00000473639 PBX2P40425 430 aa7.2□□□□□ -1.26
RND3-208ENST00000473639 LSM11P83369 360 aaKnown RBP eCLIP7.2□□□□□ -1.26
RND3-208ENST00000473639 PLCB2Q00722 1185 aa7.2□□□□□ -1.26
RND3-208ENST00000473639 CAMK2BQ13554 666 aa7.2□□□□□ -1.26
RND3-208ENST00000473639 PPP4R3BQ5MIZ7 849 aa7.2□□□□□ -1.26
RND3-208ENST00000473639 ANO8Q9HCE9 1232 aaPredicted RBP7.2□□□□□ -1.26
RND3-208ENST00000473639 ZNF454Q8N9F8 522 aa7.19□□□□□ -1.26
RND3-208ENST00000473639 ARHGAP33O14559 1287 aa7.18□□□□□ -1.26
RND3-208ENST00000473639 PSEN2P49810 448 aa7.18□□□□□ -1.26
RND3-208ENST00000473639 FOSBP53539 338 aa7.18□□□□□ -1.26
RND3-208ENST00000473639 DPYSL4O14531 572 aa7.17□□□□□ -1.26
RND3-208ENST00000473639 TSHZ2Q9NRE2 1034 aa7.17□□□□□ -1.26
RND3-208ENST00000473639 DMRTA1Q5VZB9 504 aa7.16□□□□□ -1.26
RND3-208ENST00000473639 JPH4Q96JJ6 628 aa7.15□□□□□ -1.26
RND3-208ENST00000473639 KCNK17Q96T54 332 aa7.14□□□□□ -1.27
RND3-208ENST00000473639 MYT1LQ9UL68 1186 aa7.14□□□□□ -1.27
RND3-208ENST00000473639 ADGRD1Q6QNK2 874 aa7.13□□□□□ -1.27
RND3-208ENST00000473639 ZDHHC16Q969W1 377 aa7.13□□□□□ -1.27
RND3-208ENST00000473639 ADAM33Q9BZ11 813 aa7.13□□□□□ -1.27
RND3-208ENST00000473639 BCL2L12Q9HB09 334 aa7.13□□□□□ -1.27
RND3-208ENST00000473639 WDR70Q9NW82 654 aa7.13□□□□□ -1.27
RND3-208ENST00000473639 PCDHGA10Q9Y5H3 936 aa7.13□□□□□ -1.27
RND3-208ENST00000473639 HAP1P54257 671 aaPredicted RBP7.12□□□□□ -1.27
RND3-208ENST00000473639 E2F4Q16254 413 aa7.12□□□□□ -1.27
RND3-208ENST00000473639 RNF166Q96A37 237 aaPredicted RBP7.12□□□□□ -1.27
RND3-208ENST00000473639 TK2O00142 265 aa7.1□□□□□ -1.27
RND3-208ENST00000473639 PTPREP23469 700 aa7.1□□□□□ -1.27
RND3-208ENST00000473639 PTGER2P43116 358 aa7.1□□□□□ -1.27
RND3-208ENST00000473639 PHF14O94880 888 aa7.09□□□□□ -1.27
RND3-208ENST00000473639 BCANQ96GW7 911 aa7.09□□□□□ -1.27
RND3-208ENST00000473639 KCNH8Q96L42 1107 aa7.09□□□□□ -1.27
RND3-208ENST00000473639 HRO43593 1189 aa7.08□□□□□ -1.28
RND3-208ENST00000473639 PDIA6Q15084 440 aa7.08□□□□□ -1.28
RND3-208ENST00000473639 DDX12PQ92771 950 aa7.08□□□□□ -1.28
RND3-208ENST00000473639 TYW1BQ6NUM6 668 aa7.07□□□□□ -1.28
RND3-208ENST00000473639 VPS9D1Q9Y2B5 631 aa7.07□□□□□ -1.28
RND3-208ENST00000473639 FBXW7Q969H0 707 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms