RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 PPP1R15BQ5SWA1 713 aa13.67□□□□□ -0.22
SEC22A-204ENST00000473494 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
SEC22A-204ENST00000473494 SEMA3EO15041 775 aa13.64□□□□□ -0.23
SEC22A-204ENST00000473494 TMEM121BQ9BXQ6 578 aaPredicted RBP13.64□□□□□ -0.23
SEC22A-204ENST00000473494 GABBR2O75899 941 aa13.61□□□□□ -0.23
SEC22A-204ENST00000473494 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
SEC22A-204ENST00000473494 PLCG2P16885 1265 aa13.58□□□□□ -0.24
SEC22A-204ENST00000473494 FOXK1P85037 733 aa13.58□□□□□ -0.24
SEC22A-204ENST00000473494 DSG2Q14126 1118 aa13.58□□□□□ -0.24
SEC22A-204ENST00000473494 TMC2Q8TDI7 906 aa13.57□□□□□ -0.24
SEC22A-204ENST00000473494 KIF3CO14782 793 aa13.55□□□□□ -0.24
SEC22A-204ENST00000473494 EMILIN3Q9NT22 766 aa13.54□□□□□ -0.24
SEC22A-204ENST00000473494 SMYD5Q6GMV2 418 aa13.53□□□□□ -0.24
SEC22A-204ENST00000473494 G3V3G9 751 aa13.52□□□□□ -0.25
SEC22A-204ENST00000473494 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
SEC22A-204ENST00000473494 L3MBTL3Q96JM7 780 aaPredicted RBP13.51□□□□□ -0.25
SEC22A-204ENST00000473494 C2orf72A6NCS6 295 aa13.5□□□□□ -0.25
SEC22A-204ENST00000473494 PDIA6Q15084 440 aa13.5□□□□□ -0.25
SEC22A-204ENST00000473494 POTEHQ6S545 545 aa13.5□□□□□ -0.25
SEC22A-204ENST00000473494 ZC3H15Q8WU90 426 aaKnown RBP13.5□□□□□ -0.25
SEC22A-204ENST00000473494 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
SEC22A-204ENST00000473494 DPYSL4O14531 572 aa13.48□□□□□ -0.25
SEC22A-204ENST00000473494 SLC39A7Q92504 469 aa13.48□□□□□ -0.25
SEC22A-204ENST00000473494 SPDYE16A6NNV3 312 aaPredicted RBP13.47□□□□□ -0.25
SEC22A-204ENST00000473494 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
SEC22A-204ENST00000473494 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
SEC22A-204ENST00000473494 SEC24BO95487 1268 aa13.45□□□□□ -0.26
SEC22A-204ENST00000473494 TMEM92Q6UXU6 159 aa13.44□□□□□ -0.26
SEC22A-204ENST00000473494 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
SEC22A-204ENST00000473494 MLLT3P42568 568 aaPredicted RBP13.43□□□□□ -0.26
SEC22A-204ENST00000473494 C7P10643 843 aa13.42□□□□□ -0.26
SEC22A-204ENST00000473494 METRNQ9UJH8 293 aa13.39□□□□□ -0.27
SEC22A-204ENST00000473494 ZMYND10O75800 440 aa13.38□□□□□ -0.27
SEC22A-204ENST00000473494 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
SEC22A-204ENST00000473494 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
SEC22A-204ENST00000473494 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
SEC22A-204ENST00000473494 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
SEC22A-204ENST00000473494 BARGINQ6ZT62 677 aa13.32□□□□□ -0.28
SEC22A-204ENST00000473494 SLC24A3Q9HC58 644 aa13.32□□□□□ -0.28
SEC22A-204ENST00000473494 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
SEC22A-204ENST00000473494 MAP3K9P80192 1104 aa13.3□□□□□ -0.28
SEC22A-204ENST00000473494 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
SEC22A-204ENST00000473494 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
SEC22A-204ENST00000473494 TMEM132AQ24JP5 1023 aa13.28□□□□□ -0.28
SEC22A-204ENST00000473494 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
SEC22A-204ENST00000473494 GPR37O15354 613 aa13.26□□□□□ -0.29
SEC22A-204ENST00000473494 PTGER2P43116 358 aa13.26□□□□□ -0.29
SEC22A-204ENST00000473494 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
SEC22A-204ENST00000473494 SLC34A2O95436 690 aa13.22□□□□□ -0.29
SEC22A-204ENST00000473494 GRXCR2A6NFK2 248 aa13.2□□□□□ -0.3
SEC22A-204ENST00000473494 TBC1D12O60347 775 aa13.2□□□□□ -0.3
SEC22A-204ENST00000473494 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
SEC22A-204ENST00000473494 EVI5O60447 810 aa13.18□□□□□ -0.3
SEC22A-204ENST00000473494 OSBPP22059 807 aa13.18□□□□□ -0.3
SEC22A-204ENST00000473494 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
SEC22A-204ENST00000473494 AK7Q96M32 723 aa13.17□□□□□ -0.3
SEC22A-204ENST00000473494 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.16□□□□□ -0.3
SEC22A-204ENST00000473494 DDX12PQ92771 950 aa13.14□□□□□ -0.31
SEC22A-204ENST00000473494 ANO8Q9HCE9 1232 aaPredicted RBP13.12□□□□□ -0.31
SEC22A-204ENST00000473494 NUTM2FA1L443 756 aa13.1□□□□□ -0.31
SEC22A-204ENST00000473494 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
SEC22A-204ENST00000473494 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
SEC22A-204ENST00000473494 MAP2K5Q13163 448 aa13.08□□□□□ -0.32
SEC22A-204ENST00000473494 HIC1Q14526 733 aa13.08□□□□□ -0.32
SEC22A-204ENST00000473494 GTF3C3Q9Y5Q9 886 aa13.07□□□□□ -0.32
SEC22A-204ENST00000473494 TRIM66O15016 1216 aa13.06□□□□□ -0.32
SEC22A-204ENST00000473494 GNPATO15228 680 aa13.06□□□□□ -0.32
SEC22A-204ENST00000473494 FCHSD2O94868 740 aa13.06□□□□□ -0.32
SEC22A-204ENST00000473494 MINK1Q8N4C8 1332 aaPredicted RBP13.06□□□□□ -0.32
SEC22A-204ENST00000473494 PCDHGA4Q9Y5G9 962 aa13.05□□□□□ -0.32
SEC22A-204ENST00000473494 PHF14O94880 888 aa13.04□□□□□ -0.32
SEC22A-204ENST00000473494 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
SEC22A-204ENST00000473494 KDM4FA0A1W2PPD8 638 aa13.03□□□□□ -0.32
SEC22A-204ENST00000473494 PTGDRQ13258 359 aa13.03□□□□□ -0.32
SEC22A-204ENST00000473494 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
SEC22A-204ENST00000473494 EPAS1Q99814 870 aa13.03□□□□□ -0.32
SEC22A-204ENST00000473494 PDE4DQ08499 809 aa13.02□□□□□ -0.33
SEC22A-204ENST00000473494 GPBP1L1Q9HC44 474 aaPredicted RBP13.01□□□□□ -0.33
SEC22A-204ENST00000473494 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
SEC22A-204ENST00000473494 IRF6O14896 467 aa12.98□□□□□ -0.33
SEC22A-204ENST00000473494 AMHR2Q16671 573 aa12.98□□□□□ -0.33
SEC22A-204ENST00000473494 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
SEC22A-204ENST00000473494 KDM4CQ9H3R0 1056 aa12.98□□□□□ -0.33
SEC22A-204ENST00000473494 PCDHGA10Q9Y5H3 936 aa12.98□□□□□ -0.33
SEC22A-204ENST00000473494 FECHP22830 423 aa12.97□□□□□ -0.33
SEC22A-204ENST00000473494 CDHR5Q9HBB8 845 aa12.97□□□□□ -0.33
SEC22A-204ENST00000473494 SLAIN1Q8ND83 568 aa12.96□□□□□ -0.33
SEC22A-204ENST00000473494 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
SEC22A-204ENST00000473494 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
SEC22A-204ENST00000473494 TIMELESSQ9UNS1 1208 aa12.95□□□□□ -0.34
SEC22A-204ENST00000473494 POTEB2H3BUK9 544 aa12.94□□□□□ -0.34
SEC22A-204ENST00000473494 MAP3K7O43318 606 aa12.94□□□□□ -0.34
SEC22A-204ENST00000473494 HOXB3P14651 431 aaPredicted RBP12.94□□□□□ -0.34
SEC22A-204ENST00000473494 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
SEC22A-204ENST00000473494 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
SEC22A-204ENST00000473494 NPDC1Q9NQX5 325 aaPredicted RBP12.93□□□□□ -0.34
SEC22A-204ENST00000473494 FOSBP53539 338 aa12.92□□□□□ -0.34
SEC22A-204ENST00000473494 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
SEC22A-204ENST00000473494 ERICH6Q7L0X2 663 aa12.91□□□□□ -0.34
SEC22A-204ENST00000473494 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms