RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 C3orf67Q6ZVT6 689 aa7.98□□□□□ -1.13
CLCC1-208ENST00000473062 DDX27Q96GQ7 796 aaKnown RBP7.98□□□□□ -1.13
CLCC1-208ENST00000473062 TMEM121BQ9BXQ6 578 aaPredicted RBP7.97□□□□□ -1.13
CLCC1-208ENST00000473062 CRISPLD2Q9H0B8 497 aa7.97□□□□□ -1.13
CLCC1-208ENST00000473062 LARP6Q9BRS8 491 aaKnown RBP7.96□□□□□ -1.14
CLCC1-208ENST00000473062 TULP1O00294 542 aaPredicted RBP7.95□□□□□ -1.14
CLCC1-208ENST00000473062 MFSD10Q14728 455 aa7.95□□□□□ -1.14
CLCC1-208ENST00000473062 E2F4Q16254 413 aa7.95□□□□□ -1.14
CLCC1-208ENST00000473062 CADPS2Q86UW7 1296 aa7.95□□□□□ -1.14
CLCC1-208ENST00000473062 GPHNQ9NQX3 736 aaPredicted RBP7.95□□□□□ -1.14
CLCC1-208ENST00000473062 PELP1Q8IZL8 1130 aaKnown RBP7.94□□□□□ -1.14
CLCC1-208ENST00000473062 DPY19L2Q6NUT2 758 aa7.93□□□□□ -1.14
CLCC1-208ENST00000473062 ARHGEF1Q92888 912 aaKnown RBP7.93□□□□□ -1.14
CLCC1-208ENST00000473062 COLQQ9Y215 455 aaPredicted RBP7.92□□□□□ -1.14
CLCC1-208ENST00000473062 NCKAP5LQ9HCH0 1330 aa7.92□□□□□ -1.14
CLCC1-208ENST00000473062 POTEIP0CG38 1075 aa7.91□□□□□ -1.14
CLCC1-208ENST00000473062 PPP1R15BQ5SWA1 713 aa7.91□□□□□ -1.14
CLCC1-208ENST00000473062 MAMSTRQ6ZN01 415 aa7.91□□□□□ -1.14
CLCC1-208ENST00000473062 OTUD5Q96G74 571 aa7.91□□□□□ -1.14
CLCC1-208ENST00000473062 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.9□□□□□ -1.14
CLCC1-208ENST00000473062 FOXK1P85037 733 aa7.89□□□□□ -1.15
CLCC1-208ENST00000473062 ZNF316A6NFI3 1004 aaPredicted RBP7.88□□□□□ -1.15
CLCC1-208ENST00000473062 SCUBE2Q9NQ36 999 aa7.87□□□□□ -1.15
CLCC1-208ENST00000473062 ARIH1Q9Y4X5 557 aaPredicted RBP7.87□□□□□ -1.15
CLCC1-208ENST00000473062 CAMK2BQ13554 666 aa7.86□□□□□ -1.15
CLCC1-208ENST00000473062 KCNV2Q8TDN2 545 aa7.86□□□□□ -1.15
CLCC1-208ENST00000473062 C2orf72A6NCS6 295 aa7.85□□□□□ -1.15
CLCC1-208ENST00000473062 SMYD5Q6GMV2 418 aa7.85□□□□□ -1.15
CLCC1-208ENST00000473062 KIF3CO14782 793 aa7.84□□□□□ -1.15
CLCC1-208ENST00000473062 POTEFA5A3E0 1075 aa7.83□□□□□ -1.16
CLCC1-208ENST00000473062 SPDYE16A6NNV3 312 aaPredicted RBP7.83□□□□□ -1.16
CLCC1-208ENST00000473062 TBC1D12O60347 775 aa7.83□□□□□ -1.16
CLCC1-208ENST00000473062 DSG2Q14126 1118 aa7.83□□□□□ -1.16
CLCC1-208ENST00000473062 PLPP6Q8IY26 295 aa7.83□□□□□ -1.16
CLCC1-208ENST00000473062 RIMBP2O15034 1052 aa7.79□□□□□ -1.16
CLCC1-208ENST00000473062 MAP3K9P80192 1104 aa7.78□□□□□ -1.16
CLCC1-208ENST00000473062 SNPHO15079 494 aa7.77□□□□□ -1.17
CLCC1-208ENST00000473062 SLC34A2O95436 690 aa7.77□□□□□ -1.17
CLCC1-208ENST00000473062 DOK7Q18PE1 504 aa7.77□□□□□ -1.17
CLCC1-208ENST00000473062 PDIA6Q15084 440 aa7.75□□□□□ -1.17
CLCC1-208ENST00000473062 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
CLCC1-208ENST00000473062 TMEM92Q6UXU6 159 aa7.74□□□□□ -1.17
CLCC1-208ENST00000473062 SLAIN1Q8ND83 568 aa7.74□□□□□ -1.17
CLCC1-208ENST00000473062 DPYSL4O14531 572 aa7.73□□□□□ -1.17
CLCC1-208ENST00000473062 OXER1Q8TDS5 423 aa7.73□□□□□ -1.17
CLCC1-208ENST00000473062 PTCD2Q8WV60 388 aaKnown RBP7.73□□□□□ -1.17
CLCC1-208ENST00000473062 ZSWIM6Q9HCJ5 1215 aa7.73□□□□□ -1.17
CLCC1-208ENST00000473062 TESPA1A2RU30 521 aaPredicted RBP7.72□□□□□ -1.17
CLCC1-208ENST00000473062 EMILIN3Q9NT22 766 aa7.72□□□□□ -1.17
CLCC1-208ENST00000473062 UPF1Q92900 1129 aaKnown RBP eCLIP7.71□□□□□ -1.18
CLCC1-208ENST00000473062 ZNF710Q8N1W2 664 aa7.7□□□□□ -1.18
CLCC1-208ENST00000473062 SEMA3EO15041 775 aa7.68□□□□□ -1.18
CLCC1-208ENST00000473062 MMRN1Q13201 1228 aa7.68□□□□□ -1.18
CLCC1-208ENST00000473062 EVI5O60447 810 aa7.67□□□□□ -1.18
CLCC1-208ENST00000473062 LMOD2Q6P5Q4 547 aa7.67□□□□□ -1.18
CLCC1-208ENST00000473062 PSDA5PKW4 1024 aaPredicted RBP7.66□□□□□ -1.18
CLCC1-208ENST00000473062 PTGER2P43116 358 aa7.66□□□□□ -1.18
CLCC1-208ENST00000473062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
CLCC1-208ENST00000473062 PCDHGA4Q9Y5G9 962 aa7.65□□□□□ -1.18
CLCC1-208ENST00000473062 TPRNQ4KMQ1 711 aa7.64□□□□□ -1.19
CLCC1-208ENST00000473062 EPAS1Q99814 870 aa7.64□□□□□ -1.19
CLCC1-208ENST00000473062 POTEB2H3BUK9 544 aa7.63□□□□□ -1.19
CLCC1-208ENST00000473062 POTEJP0CG39 1038 aa7.62□□□□□ -1.19
CLCC1-208ENST00000473062 FBXW7Q969H0 707 aa7.62□□□□□ -1.19
CLCC1-208ENST00000473062 ANO8Q9HCE9 1232 aaPredicted RBP7.62□□□□□ -1.19
CLCC1-208ENST00000473062 PHF14O94880 888 aa7.61□□□□□ -1.19
CLCC1-208ENST00000473062 GPIHBP1Q8IV16 184 aa7.61□□□□□ -1.19
CLCC1-208ENST00000473062 CDAN1Q8IWY9 1227 aa7.61□□□□□ -1.19
CLCC1-208ENST00000473062 GRXCR2A6NFK2 248 aa7.6□□□□□ -1.19
CLCC1-208ENST00000473062 JPH4Q96JJ6 628 aa7.6□□□□□ -1.19
CLCC1-208ENST00000473062 HOXB3P14651 431 aaPredicted RBP7.58□□□□□ -1.2
CLCC1-208ENST00000473062 MLLT3P42568 568 aaPredicted RBP7.58□□□□□ -1.2
CLCC1-208ENST00000473062 TYW1BQ6NUM6 668 aa7.58□□□□□ -1.2
CLCC1-208ENST00000473062 DDX12PQ92771 950 aa7.58□□□□□ -1.2
CLCC1-208ENST00000473062 KCNH8Q96L42 1107 aa7.57□□□□□ -1.2
CLCC1-208ENST00000473062 PPP4R3BQ5MIZ7 849 aa7.56□□□□□ -1.2
CLCC1-208ENST00000473062 CERKQ8TCT0 537 aa7.56□□□□□ -1.2
CLCC1-208ENST00000473062 NUTM2FA1L443 756 aa7.55□□□□□ -1.2
CLCC1-208ENST00000473062 FCHSD2O94868 740 aa7.55□□□□□ -1.2
CLCC1-208ENST00000473062 HOXB1P14653 301 aaPredicted RBP7.55□□□□□ -1.2
CLCC1-208ENST00000473062 ARSIQ5FYB1 569 aa7.55□□□□□ -1.2
CLCC1-208ENST00000473062 GPR153Q6NV75 609 aa7.55□□□□□ -1.2
CLCC1-208ENST00000473062 MAP3K7O43318 606 aa7.54□□□□□ -1.2
CLCC1-208ENST00000473062 NUDT7P0C024 238 aa7.54□□□□□ -1.2
CLCC1-208ENST00000473062 OSBPP22059 807 aa7.53□□□□□ -1.2
CLCC1-208ENST00000473062 FOSBP53539 338 aa7.53□□□□□ -1.2
CLCC1-208ENST00000473062 EN1Q05925 392 aaPredicted RBP7.53□□□□□ -1.2
CLCC1-208ENST00000473062 ZNF454Q8N9F8 522 aa7.53□□□□□ -1.2
CLCC1-208ENST00000473062 ZC3H15Q8WU90 426 aaKnown RBP7.53□□□□□ -1.2
CLCC1-208ENST00000473062 ZDHHC16Q969W1 377 aa7.53□□□□□ -1.2
CLCC1-208ENST00000473062 HIC1Q14526 733 aa7.52□□□□□ -1.21
CLCC1-208ENST00000473062 RBM26Q5T8P6 1007 aaKnown RBP7.52□□□□□ -1.21
CLCC1-208ENST00000473062 KDM4FA0A1W2PPD8 638 aa7.51□□□□□ -1.21
CLCC1-208ENST00000473062 ZMYND10O75800 440 aa7.5□□□□□ -1.21
CLCC1-208ENST00000473062 KRI1Q8N9T8 703 aaKnown RBP7.5□□□□□ -1.21
CLCC1-208ENST00000473062 PCDHGA10Q9Y5H3 936 aa7.5□□□□□ -1.21
CLCC1-208ENST00000473062 SPNS2Q8IVW8 549 aa7.49□□□□□ -1.21
CLCC1-208ENST00000473062 DAXXQ9UER7 740 aaPredicted RBP7.49□□□□□ -1.21
CLCC1-208ENST00000473062 GNPATO15228 680 aa7.48□□□□□ -1.21
CLCC1-208ENST00000473062 BARGINQ6ZT62 677 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms