RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
SMC5-202ENST00000471372 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
SMC5-202ENST00000471372 ZMYND10O75800 440 aa13□□□□□ -0.33
SMC5-202ENST00000471372 TIE1P35590 1138 aa12.99□□□□□ -0.33
SMC5-202ENST00000471372 MS4A4AQ96JQ5 239 aa12.98□□□□□ -0.33
SMC5-202ENST00000471372 PDE4AP27815 886 aa12.97□□□□□ -0.33
SMC5-202ENST00000471372 MFSD10Q14728 455 aa12.97□□□□□ -0.33
SMC5-202ENST00000471372 SMYD5Q6GMV2 418 aa12.95□□□□□ -0.34
SMC5-202ENST00000471372 CRISPLD2Q9H0B8 497 aa12.95□□□□□ -0.34
SMC5-202ENST00000471372 TTLL13PA6NNM8 815 aa12.92□□□□□ -0.34
SMC5-202ENST00000471372 POTEJP0CG39 1038 aa12.92□□□□□ -0.34
SMC5-202ENST00000471372 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
SMC5-202ENST00000471372 HOMEZQ8IX15 550 aa12.92□□□□□ -0.34
SMC5-202ENST00000471372 DDX27Q96GQ7 796 aaKnown RBP12.92□□□□□ -0.34
SMC5-202ENST00000471372 ARIH1Q9Y4X5 557 aaPredicted RBP12.92□□□□□ -0.34
SMC5-202ENST00000471372 BARGINQ6ZT62 677 aa12.9□□□□□ -0.34
SMC5-202ENST00000471372 CAMK2BQ13554 666 aa12.88□□□□□ -0.35
SMC5-202ENST00000471372 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
SMC5-202ENST00000471372 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
SMC5-202ENST00000471372 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
SMC5-202ENST00000471372 RBM26Q5T8P6 1007 aaKnown RBP12.85□□□□□ -0.35
SMC5-202ENST00000471372 SCUBE2Q9NQ36 999 aa12.85□□□□□ -0.35
SMC5-202ENST00000471372 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
SMC5-202ENST00000471372 SEC24BO95487 1268 aa12.84□□□□□ -0.35
SMC5-202ENST00000471372 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
SMC5-202ENST00000471372 GPBP1L1Q9HC44 474 aaPredicted RBP12.81□□□□□ -0.36
SMC5-202ENST00000471372 IER5LQ5T953 404 aa12.8□□□□□ -0.36
SMC5-202ENST00000471372 AK7Q96M32 723 aa12.8□□□□□ -0.36
SMC5-202ENST00000471372 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
SMC5-202ENST00000471372 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
SMC5-202ENST00000471372 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
SMC5-202ENST00000471372 GPIHBP1Q8IV16 184 aa12.79□□□□□ -0.36
SMC5-202ENST00000471372 POTEMA6NI47 508 aa12.76□□□□□ -0.37
SMC5-202ENST00000471372 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
SMC5-202ENST00000471372 PPP1R15BQ5SWA1 713 aa12.75□□□□□ -0.37
SMC5-202ENST00000471372 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
SMC5-202ENST00000471372 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
SMC5-202ENST00000471372 IL27Q8NEV9 243 aa12.73□□□□□ -0.37
SMC5-202ENST00000471372 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
SMC5-202ENST00000471372 PLSCR2Q9NRY7 297 aa12.72□□□□□ -0.37
SMC5-202ENST00000471372 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.37
SMC5-202ENST00000471372 DPYSL4O14531 572 aa12.7□□□□□ -0.38
SMC5-202ENST00000471372 TRIM66O15016 1216 aa12.69□□□□□ -0.38
SMC5-202ENST00000471372 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
SMC5-202ENST00000471372 PLCG2P16885 1265 aa12.68□□□□□ -0.38
SMC5-202ENST00000471372 PDE4DQ08499 809 aa12.67□□□□□ -0.38
SMC5-202ENST00000471372 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
SMC5-202ENST00000471372 ILDR1Q86SU0 546 aaPredicted RBP12.65□□□□□ -0.38
SMC5-202ENST00000471372 DSG2Q14126 1118 aa12.64□□□□□ -0.39
SMC5-202ENST00000471372 PDIA6Q15084 440 aa12.64□□□□□ -0.39
SMC5-202ENST00000471372 IRX5P78411 483 aaPredicted RBP12.63□□□□□ -0.39
SMC5-202ENST00000471372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.397e-10■■■■□ 24.8
SMC5-202ENST00000471372 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
SMC5-202ENST00000471372 GPR37O15354 613 aa12.61□□□□□ -0.39
SMC5-202ENST00000471372 LCE2DQ5TA82 110 aaPredicted RBP12.61□□□□□ -0.39
SMC5-202ENST00000471372 ZMYND15Q9H091 742 aa12.59□□□□□ -0.39
SMC5-202ENST00000471372 OCEL1Q9H607 264 aa12.59□□□□□ -0.39
SMC5-202ENST00000471372 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
SMC5-202ENST00000471372 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
SMC5-202ENST00000471372 FAM117AQ9C073 453 aa12.55□□□□□ -0.4
SMC5-202ENST00000471372 FOXK1P85037 733 aa12.54□□□□□ -0.4
SMC5-202ENST00000471372 MICALL2Q8IY33 904 aa12.54□□□□□ -0.4
SMC5-202ENST00000471372 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
SMC5-202ENST00000471372 TMC2Q8TDI7 906 aa12.53□□□□□ -0.4
SMC5-202ENST00000471372 RSPH6AQ9H0K4 717 aa12.51□□□□□ -0.41
SMC5-202ENST00000471372 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
SMC5-202ENST00000471372 UBTFP17480 764 aaKnown RBP12.5□□□□□ -0.41
SMC5-202ENST00000471372 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
SMC5-202ENST00000471372 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
SMC5-202ENST00000471372 PLPP6Q8IY26 295 aa12.49□□□□□ -0.41
SMC5-202ENST00000471372 CCDC102AQ96A19 550 aa12.49□□□□□ -0.41
SMC5-202ENST00000471372 PLEKHG3A1L390 1219 aa12.48□□□□□ -0.41
SMC5-202ENST00000471372 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
SMC5-202ENST00000471372 MAP2K5Q13163 448 aa12.47□□□□□ -0.41
SMC5-202ENST00000471372 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
SMC5-202ENST00000471372 IRF6O14896 467 aa12.45□□□□□ -0.42
SMC5-202ENST00000471372 PDCD7Q8N8D1 485 aaKnown RBP12.45□□□□□ -0.42
SMC5-202ENST00000471372 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
SMC5-202ENST00000471372 PARP9Q8IXQ6 854 aa12.44□□□□□ -0.42
SMC5-202ENST00000471372 MAP3K9P80192 1104 aa12.43□□□□□ -0.42
SMC5-202ENST00000471372 OSBPP22059 807 aa12.42□□□□□ -0.42
SMC5-202ENST00000471372 FECHP22830 423 aa12.42□□□□□ -0.42
SMC5-202ENST00000471372 AMHR2Q16671 573 aa12.42□□□□□ -0.42
SMC5-202ENST00000471372 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
SMC5-202ENST00000471372 KIF3CO14782 793 aa12.41□□□□□ -0.42
SMC5-202ENST00000471372 ST18O60284 1047 aa12.41□□□□□ -0.42
SMC5-202ENST00000471372 GNPATO15228 680 aa12.4□□□□□ -0.42
SMC5-202ENST00000471372 C3orf67Q6ZVT6 689 aa12.39□□□□□ -0.43
SMC5-202ENST00000471372 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMC5-202ENST00000471372 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
SMC5-202ENST00000471372 TMEM121BQ9BXQ6 578 aaPredicted RBP12.39□□□□□ -0.43
SMC5-202ENST00000471372 C1orf115Q9H7X2 142 aa12.38□□□□□ -0.43
SMC5-202ENST00000471372 ARID3AQ99856 593 aa12.37□□□□□ -0.43
SMC5-202ENST00000471372 BOLA1Q9Y3E2 137 aa12.37□□□□□ -0.43
SMC5-202ENST00000471372 HIC1Q14526 733 aa12.36□□□□□ -0.43
SMC5-202ENST00000471372 DDX12PQ92771 950 aa12.36□□□□□ -0.43
SMC5-202ENST00000471372 PODXL2Q9NZ53 605 aa12.36□□□□□ -0.43
SMC5-202ENST00000471372 SNPHO15079 494 aa12.35□□□□□ -0.43
SMC5-202ENST00000471372 FCHSD2O94868 740 aa12.35□□□□□ -0.43
SMC5-202ENST00000471372 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms