RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CABP2Q9NPB3 220 aa5.43□□□□□ -1.54
UBXN4-207ENST00000471246 LCE2BO14633 110 aa5.42□□□□□ -1.54
UBXN4-207ENST00000471246 HRO43593 1189 aa5.4□□□□□ -1.54
UBXN4-207ENST00000471246 KCTD12Q96CX2 325 aaKnown RBP5.4□□□□□ -1.54
UBXN4-207ENST00000471246 MICALL2Q8IY33 904 aa5.39□□□□□ -1.55
UBXN4-207ENST00000471246 CHRM1P11229 460 aaPredicted RBP5.38□□□□□ -1.55
UBXN4-207ENST00000471246 PDAP1Q13442 181 aaKnown RBP5.38□□□□□ -1.55
UBXN4-207ENST00000471246 LHX6Q9UPM6 363 aa5.37□□□□□ -1.55
UBXN4-207ENST00000471246 NUDT7P0C024 238 aa5.36□□□□□ -1.55
UBXN4-207ENST00000471246 TK2O00142 265 aa5.34□□□□□ -1.55
UBXN4-207ENST00000471246 ARHGAP33O14559 1287 aa5.34□□□□□ -1.55
UBXN4-207ENST00000471246 PTPN5P54829 565 aa5.34□□□□□ -1.55
UBXN4-207ENST00000471246 DMRTA1Q5VZB9 504 aa5.34□□□□□ -1.55
UBXN4-207ENST00000471246 GSE1Q14687 1217 aa5.32□□□□□ -1.56
UBXN4-207ENST00000471246 TRAF7Q6Q0C0 670 aa5.32□□□□□ -1.56
UBXN4-207ENST00000471246 EFCAB3Q8N7B9 438 aa5.31□□□□□ -1.56
UBXN4-207ENST00000471246 PSEN2P49810 448 aa5.29□□□□□ -1.56
UBXN4-207ENST00000471246 ZNF775Q96BV0 537 aaPredicted RBP5.27□□□□□ -1.57
UBXN4-207ENST00000471246 MS4A4AQ96JQ5 239 aa5.26□□□□□ -1.57
UBXN4-207ENST00000471246 PCDHGA4Q9Y5G9 962 aa5.26□□□□□ -1.57
UBXN4-207ENST00000471246 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
UBXN4-207ENST00000471246 STAC3Q96MF2 364 aa5.25□□□□□ -1.57
UBXN4-207ENST00000471246 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
UBXN4-207ENST00000471246 LAPTM4AQ15012 233 aa5.24□□□□□ -1.57
UBXN4-207ENST00000471246 THSD4Q6ZMP0 1018 aa5.24□□□□□ -1.57
UBXN4-207ENST00000471246 ZNF787Q6DD87 383 aa5.23□□□□□ -1.57
UBXN4-207ENST00000471246 GFRA3O60609 400 aa5.22□□□□□ -1.57
UBXN4-207ENST00000471246 PSDA5PKW4 1024 aaPredicted RBP5.2□□□□□ -1.58
UBXN4-207ENST00000471246 KIF3CO14782 793 aa5.2□□□□□ -1.58
UBXN4-207ENST00000471246 SLC34A2O95436 690 aa5.2□□□□□ -1.58
UBXN4-207ENST00000471246 KDM4FA0A1W2PPD8 638 aa5.19□□□□□ -1.58
UBXN4-207ENST00000471246 VPS9D1Q9Y2B5 631 aa5.19□□□□□ -1.58
UBXN4-207ENST00000471246 C2orf72A6NCS6 295 aa5.18□□□□□ -1.58
UBXN4-207ENST00000471246 ITGBL1O95965 494 aaPredicted RBP5.18□□□□□ -1.58
UBXN4-207ENST00000471246 PHF8Q9UPP1 1060 aa5.18□□□□□ -1.58
UBXN4-207ENST00000471246 SOX12O15370 315 aa5.17□□□□□ -1.58
UBXN4-207ENST00000471246 BHMG1C9JSJ3 638 aaPredicted RBP5.15□□□□□ -1.59
UBXN4-207ENST00000471246 KLHL34Q8N239 644 aa5.15□□□□□ -1.59
UBXN4-207ENST00000471246 WNT2BQ93097 391 aa5.15□□□□□ -1.59
UBXN4-207ENST00000471246 NRG2O14511 850 aaPredicted RBP5.14□□□□□ -1.59
UBXN4-207ENST00000471246 KCNK17Q96T54 332 aa5.14□□□□□ -1.59
UBXN4-207ENST00000471246 PPP4R3BQ5MIZ7 849 aa5.12□□□□□ -1.59
UBXN4-207ENST00000471246 GOLGA8CPA6NN73 597 aa5.11□□□□□ -1.59
UBXN4-207ENST00000471246 SLC4A5Q9BY07 1137 aa5.1□□□□□ -1.59
UBXN4-207ENST00000471246 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
UBXN4-207ENST00000471246 CIZ1Q9ULV3 898 aaPredicted RBP5.08□□□□□ -1.6
UBXN4-207ENST00000471246 MRPL50Q8N5N7 158 aaKnown RBP5.07□□□□□ -1.6
UBXN4-207ENST00000471246 KCNH8Q96L42 1107 aa5.07□□□□□ -1.6
UBXN4-207ENST00000471246 KCNC4Q03721 635 aa5.06□□□□□ -1.6
UBXN4-207ENST00000471246 FBXO22Q8NEZ5 403 aa5.06□□□□□ -1.6
UBXN4-207ENST00000471246 PTCD2Q8WV60 388 aaKnown RBP5.06□□□□□ -1.6
UBXN4-207ENST00000471246 TREML4Q6UXN2 200 aa5.05□□□□□ -1.6
UBXN4-207ENST00000471246 POTECB2RU33 542 aa5.04□□□□□ -1.6
UBXN4-207ENST00000471246 ZBED2Q9BTP6 218 aa5.04□□□□□ -1.6
UBXN4-207ENST00000471246 PRKD2Q9BZL6 878 aa5.04□□□□□ -1.6
UBXN4-207ENST00000471246 NLRP6P59044 892 aa5.03□□□□□ -1.6
UBXN4-207ENST00000471246 VASPP50552 380 aaPredicted RBP5.02□□□□□ -1.61
UBXN4-207ENST00000471246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.01□□□□□ -1.61
UBXN4-207ENST00000471246 BCAMP50895 628 aa5.01□□□□□ -1.61
UBXN4-207ENST00000471246 TMC2Q8TDI7 906 aa5.01□□□□□ -1.61
UBXN4-207ENST00000471246 ZFP91Q96JP5 570 aaPredicted RBP5.01□□□□□ -1.61
UBXN4-207ENST00000471246 BCL2L12Q9HB09 334 aa5.01□□□□□ -1.61
UBXN4-207ENST00000471246 FBXO3Q9UK99 471 aa5.01□□□□□ -1.61
UBXN4-207ENST00000471246 STK17AQ9UEE5 414 aa5□□□□□ -1.61
UBXN4-207ENST00000471246 NBPF3Q9H094 633 aa4.99□□□□□ -1.61
UBXN4-207ENST00000471246 PDZRN3Q9UPQ7 1066 aa4.99□□□□□ -1.61
UBXN4-207ENST00000471246 ANKK1Q8NFD2 765 aa4.98□□□□□ -1.61
UBXN4-207ENST00000471246 WBP1LQ9NX94 342 aa4.98□□□□□ -1.61
UBXN4-207ENST00000471246 V9GY48 417 aaPredicted RBP4.98□□□□□ -1.61
UBXN4-207ENST00000471246 FKBP8Q14318 412 aa4.97□□□□□ -1.61
UBXN4-207ENST00000471246 NYAP1Q6ZVC0 841 aa4.97□□□□□ -1.61
UBXN4-207ENST00000471246 ZNF454Q8N9F8 522 aa4.97□□□□□ -1.61
UBXN4-207ENST00000471246 SPOCK2Q92563 424 aa4.97□□□□□ -1.61
UBXN4-207ENST00000471246 SOWAHBA6NEL2 793 aa4.96□□□□□ -1.62
UBXN4-207ENST00000471246 PTPREP23469 700 aa4.96□□□□□ -1.62
UBXN4-207ENST00000471246 MFRPQ9BY79 579 aa4.96□□□□□ -1.62
UBXN4-207ENST00000471246 RNF25Q96BH1 459 aaPredicted RBP4.95□□□□□ -1.62
UBXN4-207ENST00000471246 MYT1Q01538 1121 aa4.94□□□□□ -1.62
UBXN4-207ENST00000471246 SUZ12Q15022 739 aaKnown RBP4.94□□□□□ -1.62
UBXN4-207ENST00000471246 RIOK3O14730 519 aaKnown RBP4.93□□□□□ -1.62
UBXN4-207ENST00000471246 TBC1D12O60347 775 aa4.93□□□□□ -1.62
UBXN4-207ENST00000471246 PLPP6Q8IY26 295 aa4.93□□□□□ -1.62
UBXN4-207ENST00000471246 VGFO15240 615 aaPredicted RBP4.92□□□□□ -1.62
UBXN4-207ENST00000471246 FOSBP53539 338 aa4.92□□□□□ -1.62
UBXN4-207ENST00000471246 PPP1R18Q6NYC8 613 aa4.92□□□□□ -1.62
UBXN4-207ENST00000471246 TRIM41Q8WV44 630 aa4.92□□□□□ -1.62
UBXN4-207ENST00000471246 IFNLR1Q8IU57 520 aaPredicted RBP4.91□□□□□ -1.62
UBXN4-207ENST00000471246 RABGEF1Q9UJ41 708 aa4.91□□□□□ -1.62
UBXN4-207ENST00000471246 FOXK1P85037 733 aa4.9□□□□□ -1.63
UBXN4-207ENST00000471246 WIPF1O43516 503 aa4.89□□□□□ -1.63
UBXN4-207ENST00000471246 WFS1O76024 890 aa4.89□□□□□ -1.63
UBXN4-207ENST00000471246 PROX2Q3B8N5 592 aa4.89□□□□□ -1.63
UBXN4-207ENST00000471246 TRIM67Q6ZTA4 783 aa4.89□□□□□ -1.63
UBXN4-207ENST00000471246 ZFRQ96KR1 1074 aaKnown RBP4.89□□□□□ -1.63
UBXN4-207ENST00000471246 ADAM33Q9BZ11 813 aa4.89□□□□□ -1.63
UBXN4-207ENST00000471246 INSM1Q01101 510 aaPredicted RBP4.88□□□□□ -1.63
UBXN4-207ENST00000471246 TJAP1Q5JTD0 557 aa4.88□□□□□ -1.63
UBXN4-207ENST00000471246 DGAT1O75907 488 aa4.87□□□□□ -1.63
UBXN4-207ENST00000471246 LAPTM4BQ86VI4 370 aa4.87□□□□□ -1.63
UBXN4-207ENST00000471246 BCL11BQ9C0K0 894 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms