RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
COL9A1-206ENST00000470652 STK25O00506 426 aa11.29□□□□□ -0.6
COL9A1-206ENST00000470652 ERBB3P21860 1342 aa11.29□□□□□ -0.6
COL9A1-206ENST00000470652 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
COL9A1-206ENST00000470652 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.61
COL9A1-206ENST00000470652 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
COL9A1-206ENST00000470652 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
COL9A1-206ENST00000470652 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
COL9A1-206ENST00000470652 MS4A4AQ96JQ5 239 aa11.25□□□□□ -0.61
COL9A1-206ENST00000470652 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
COL9A1-206ENST00000470652 HS6ST3Q8IZP7 471 aa11.24□□□□□ -0.61
COL9A1-206ENST00000470652 VARS2Q5ST30 1063 aaKnown RBP11.21□□□□□ -0.61
COL9A1-206ENST00000470652 ZSWIM6Q9HCJ5 1215 aa11.18□□□□□ -0.62
COL9A1-206ENST00000470652 NLRP6P59044 892 aa11.17□□□□□ -0.62
COL9A1-206ENST00000470652 GPR153Q6NV75 609 aa11.16□□□□□ -0.62
COL9A1-206ENST00000470652 DNAJC5Q9H3Z4 198 aa11.15□□□□□ -0.62
COL9A1-206ENST00000470652 ARSIQ5FYB1 569 aa11.12□□□□□ -0.63
COL9A1-206ENST00000470652 ZNF687Q8N1G0 1237 aa11.12□□□□□ -0.63
COL9A1-206ENST00000470652 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
COL9A1-206ENST00000470652 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
COL9A1-206ENST00000470652 RNF166Q96A37 237 aaPredicted RBP11.07□□□□□ -0.64
COL9A1-206ENST00000470652 MFRPQ9BY79 579 aa11.07□□□□□ -0.64
COL9A1-206ENST00000470652 KHSRPQ92945 711 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL9A1-206ENST00000470652 RYDENQ9NUL5 291 aaKnown RBP11.05□□□□□ -0.64
COL9A1-206ENST00000470652 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
COL9A1-206ENST00000470652 MYT1LQ9UL68 1186 aa11.04□□□□□ -0.64
COL9A1-206ENST00000470652 ZNF316A6NFI3 1004 aaPredicted RBP11.02□□□□□ -0.65
COL9A1-206ENST00000470652 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
COL9A1-206ENST00000470652 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.02□□□□□ -0.65
COL9A1-206ENST00000470652 C2orf72A6NCS6 295 aa11.01□□□□□ -0.65
COL9A1-206ENST00000470652 KIF3CO14782 793 aa10.98□□□□□ -0.65
COL9A1-206ENST00000470652 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
COL9A1-206ENST00000470652 NUDT7P0C024 238 aa10.96□□□□□ -0.65
COL9A1-206ENST00000470652 PTGER2P43116 358 aa10.94□□□□□ -0.66
COL9A1-206ENST00000470652 SPRYD3Q8NCJ5 442 aa10.94□□□□□ -0.66
COL9A1-206ENST00000470652 TMC2Q8TDI7 906 aa10.94□□□□□ -0.66
COL9A1-206ENST00000470652 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
COL9A1-206ENST00000470652 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
COL9A1-206ENST00000470652 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
COL9A1-206ENST00000470652 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
COL9A1-206ENST00000470652 PPP1R37O75864 691 aa10.89□□□□□ -0.67
COL9A1-206ENST00000470652 SLC34A2O95436 690 aa10.89□□□□□ -0.67
COL9A1-206ENST00000470652 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
COL9A1-206ENST00000470652 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
COL9A1-206ENST00000470652 PBX2P40425 430 aa10.86□□□□□ -0.67
COL9A1-206ENST00000470652 POTEEQ6S8J3 1075 aa10.84□□□□□ -0.67
COL9A1-206ENST00000470652 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
COL9A1-206ENST00000470652 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
COL9A1-206ENST00000470652 PSDA5PKW4 1024 aaPredicted RBP10.76□□□□□ -0.69
COL9A1-206ENST00000470652 PLPP6Q8IY26 295 aa10.76□□□□□ -0.69
COL9A1-206ENST00000470652 PTCD2Q8WV60 388 aaKnown RBP10.76□□□□□ -0.69
COL9A1-206ENST00000470652 FOXK1P85037 733 aa10.75□□□□□ -0.69
COL9A1-206ENST00000470652 ADGRD1Q6QNK2 874 aa10.74□□□□□ -0.69
COL9A1-206ENST00000470652 KDM4FA0A1W2PPD8 638 aa10.73□□□□□ -0.69
COL9A1-206ENST00000470652 GPHNQ9NQX3 736 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-206ENST00000470652 TBC1D12O60347 775 aa10.71□□□□□ -0.69
COL9A1-206ENST00000470652 DSG2Q14126 1118 aa10.71□□□□□ -0.69
COL9A1-206ENST00000470652 HCSTQ9UBK5 93 aa10.71□□□□□ -0.69
COL9A1-206ENST00000470652 PSEN2P49810 448 aa10.7□□□□□ -0.7
COL9A1-206ENST00000470652 PDE4AP27815 886 aa10.69□□□□□ -0.7
COL9A1-206ENST00000470652 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
COL9A1-206ENST00000470652 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
COL9A1-206ENST00000470652 PPP4R3BQ5MIZ7 849 aa10.67□□□□□ -0.7
COL9A1-206ENST00000470652 TK2O00142 265 aa10.66□□□□□ -0.7
COL9A1-206ENST00000470652 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
COL9A1-206ENST00000470652 CRISPLD2Q9H0B8 497 aa10.66□□□□□ -0.7
COL9A1-206ENST00000470652 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
COL9A1-206ENST00000470652 STAC3Q96MF2 364 aa10.65□□□□□ -0.7
COL9A1-206ENST00000470652 NCKAP5LQ9HCH0 1330 aa10.64□□□□□ -0.71
COL9A1-206ENST00000470652 HRO43593 1189 aa10.63□□□□□ -0.71
COL9A1-206ENST00000470652 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
COL9A1-206ENST00000470652 LARP6Q9BRS8 491 aaKnown RBP10.62□□□□□ -0.71
COL9A1-206ENST00000470652 UPF1Q92900 1129 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL9A1-206ENST00000470652 KCNK17Q96T54 332 aa10.61□□□□□ -0.71
COL9A1-206ENST00000470652 KCTD12Q96CX2 325 aaKnown RBP10.6□□□□□ -0.71
COL9A1-206ENST00000470652 KCNH8Q96L42 1107 aa10.6□□□□□ -0.71
COL9A1-206ENST00000470652 DDX27Q96GQ7 796 aaKnown RBP10.59□□□□□ -0.71
COL9A1-206ENST00000470652 MFSD10Q14728 455 aa10.58□□□□□ -0.72
COL9A1-206ENST00000470652 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
COL9A1-206ENST00000470652 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
COL9A1-206ENST00000470652 ZNF454Q8N9F8 522 aa10.56□□□□□ -0.72
COL9A1-206ENST00000470652 WDR70Q9NW82 654 aa10.55□□□□□ -0.72
COL9A1-206ENST00000470652 VPS9D1Q9Y2B5 631 aa10.54□□□□□ -0.72
COL9A1-206ENST00000470652 PTPN5P54829 565 aa10.51□□□□□ -0.73
COL9A1-206ENST00000470652 BCL2L12Q9HB09 334 aa10.5□□□□□ -0.73
COL9A1-206ENST00000470652 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
COL9A1-206ENST00000470652 FOSBP53539 338 aa10.48□□□□□ -0.73
COL9A1-206ENST00000470652 PTPREP23469 700 aa10.47□□□□□ -0.73
COL9A1-206ENST00000470652 CAMK2BQ13554 666 aa10.46□□□□□ -0.73
COL9A1-206ENST00000470652 E2F4Q16254 413 aa10.46□□□□□ -0.73
COL9A1-206ENST00000470652 SLC4A5Q9BY07 1137 aa10.46□□□□□ -0.73
COL9A1-206ENST00000470652 ANO8Q9HCE9 1232 aaPredicted RBP10.46□□□□□ -0.73
COL9A1-206ENST00000470652 EVI5O60447 810 aa10.45□□□□□ -0.74
COL9A1-206ENST00000470652 GOLGA8CPA6NN73 597 aa10.44□□□□□ -0.74
COL9A1-206ENST00000470652 BHMG1C9JSJ3 638 aaPredicted RBP10.43□□□□□ -0.74
COL9A1-206ENST00000470652 KDM2AQ9Y2K7 1162 aa10.43□□□□□ -0.74
COL9A1-206ENST00000470652 MAP3K9P80192 1104 aa10.42□□□□□ -0.74
COL9A1-206ENST00000470652 ZDHHC16Q969W1 377 aa10.42□□□□□ -0.74
COL9A1-206ENST00000470652 JPH4Q96JJ6 628 aa10.42□□□□□ -0.74
COL9A1-206ENST00000470652 ZBED2Q9BTP6 218 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms