RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 PTGER2P43116 358 aa10.94□□□□□ -0.66
CHD6-206ENST00000470470 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
CHD6-206ENST00000470470 SOX12O15370 315 aa10.92□□□□□ -0.66
CHD6-206ENST00000470470 MICALL2Q8IY33 904 aa10.91□□□□□ -0.66
CHD6-206ENST00000470470 ZSWIM6Q9HCJ5 1215 aa10.91□□□□□ -0.66
CHD6-206ENST00000470470 SUPT5HO00267 1087 aaKnown RBP10.9□□□□□ -0.66
CHD6-206ENST00000470470 RIOK3O14730 519 aaKnown RBP10.9□□□□□ -0.66
CHD6-206ENST00000470470 NACADO15069 1562 aa10.87□□□□□ -0.67
CHD6-206ENST00000470470 VGFO15240 615 aaPredicted RBP10.87□□□□□ -0.67
CHD6-206ENST00000470470 RNF25Q96BH1 459 aaPredicted RBP10.85□□□□□ -0.67
CHD6-206ENST00000470470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.84□□□□□ -0.67
CHD6-206ENST00000470470 TMEM92Q6UXU6 159 aa10.84□□□□□ -0.67
CHD6-206ENST00000470470 ZFP91Q96JP5 570 aaPredicted RBP10.84□□□□□ -0.67
CHD6-206ENST00000470470 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
CHD6-206ENST00000470470 RTN4Q9NQC3 1192 aaKnown RBP10.83□□□□□ -0.68
CHD6-206ENST00000470470 GPR153Q6NV75 609 aa10.82□□□□□ -0.68
CHD6-206ENST00000470470 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
CHD6-206ENST00000470470 ABCC9O60706 1549 aa10.79□□□□□ -0.68
CHD6-206ENST00000470470 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
CHD6-206ENST00000470470 NLRP6P59044 892 aa10.76□□□□□ -0.69
CHD6-206ENST00000470470 ANKRD13DQ6ZTN6 518 aa10.76□□□□□ -0.69
CHD6-206ENST00000470470 SCRIBQ14160 1630 aa10.74□□□□□ -0.69
CHD6-206ENST00000470470 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHD6-206ENST00000470470 FBXO22Q8NEZ5 403 aa10.71□□□□□ -0.69
CHD6-206ENST00000470470 BCL11BQ9C0K0 894 aaPredicted RBP10.7□□□□□ -0.7
CHD6-206ENST00000470470 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
CHD6-206ENST00000470470 ARSIQ5FYB1 569 aa10.69□□□□□ -0.7
CHD6-206ENST00000470470 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
CHD6-206ENST00000470470 RB1CC1Q8TDY2 1594 aa10.68□□□□□ -0.7
CHD6-206ENST00000470470 STK24Q9Y6E0 443 aa10.66□□□□□ -0.7
CHD6-206ENST00000470470 RSF1Q96T23 1441 aaPredicted RBP10.65□□□□□ -0.7
CHD6-206ENST00000470470 PBX2P40425 430 aa10.64□□□□□ -0.71
CHD6-206ENST00000470470 MFRPQ9BY79 579 aa10.64□□□□□ -0.71
CHD6-206ENST00000470470 KIF3CO14782 793 aa10.63□□□□□ -0.71
CHD6-206ENST00000470470 HCSTQ9UBK5 93 aa10.62□□□□□ -0.71
CHD6-206ENST00000470470 KHSRPQ92945 711 aaKnown RBP eCLIP10.61□□□□□ -0.71
CHD6-206ENST00000470470 STK25O00506 426 aa10.6□□□□□ -0.71
CHD6-206ENST00000470470 C2orf72A6NCS6 295 aa10.58□□□□□ -0.71
CHD6-206ENST00000470470 SLC34A2O95436 690 aa10.58□□□□□ -0.72
CHD6-206ENST00000470470 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
CHD6-206ENST00000470470 NUDT7P0C024 238 aa10.55□□□□□ -0.72
CHD6-206ENST00000470470 POTEEQ6S8J3 1075 aa10.54□□□□□ -0.72
CHD6-206ENST00000470470 TMC2Q8TDI7 906 aa10.53□□□□□ -0.72
CHD6-206ENST00000470470 PCDHGA4Q9Y5G9 962 aa10.53□□□□□ -0.72
CHD6-206ENST00000470470 UNC13AQ9UPW8 1703 aa10.51□□□□□ -0.73
CHD6-206ENST00000470470 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
CHD6-206ENST00000470470 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
CHD6-206ENST00000470470 CECR2Q9BXF3 1484 aa10.5□□□□□ -0.73
CHD6-206ENST00000470470 MROH2BQ7Z745 1585 aa10.49□□□□□ -0.73
CHD6-206ENST00000470470 PSDA5PKW4 1024 aaPredicted RBP10.48□□□□□ -0.73
CHD6-206ENST00000470470 BAZ1AQ9NRL2 1556 aaPredicted RBP10.48□□□□□ -0.73
CHD6-206ENST00000470470 PKD2Q13563 968 aa10.47□□□□□ -0.73
CHD6-206ENST00000470470 ADGRD1Q6QNK2 874 aa10.47□□□□□ -0.73
CHD6-206ENST00000470470 RGL2O15211 777 aa10.45□□□□□ -0.74
CHD6-206ENST00000470470 ARHGAP33O14559 1287 aa10.43□□□□□ -0.74
CHD6-206ENST00000470470 WIZO95785 1651 aa10.42□□□□□ -0.74
CHD6-206ENST00000470470 TK2O00142 265 aa10.4□□□□□ -0.74
CHD6-206ENST00000470470 PTCD2Q8WV60 388 aaKnown RBP10.4□□□□□ -0.74
CHD6-206ENST00000470470 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
CHD6-206ENST00000470470 HRO43593 1189 aa10.38□□□□□ -0.75
CHD6-206ENST00000470470 PPP1R37O75864 691 aa10.38□□□□□ -0.75
CHD6-206ENST00000470470 RGS20O76081 388 aa10.38□□□□□ -0.75
CHD6-206ENST00000470470 SMARCA4P51532 1647 aa10.38□□□□□ -0.75
CHD6-206ENST00000470470 FOXK1P85037 733 aa10.37□□□□□ -0.75
CHD6-206ENST00000470470 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
CHD6-206ENST00000470470 KCTD12Q96CX2 325 aaKnown RBP10.34□□□□□ -0.75
CHD6-206ENST00000470470 TOP2AP11388 1531 aaKnown RBP10.34□□□□□ -0.75
CHD6-206ENST00000470470 PPP4R3BQ5MIZ7 849 aa10.33□□□□□ -0.76
CHD6-206ENST00000470470 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
CHD6-206ENST00000470470 IRX2Q9BZI1 471 aaPredicted RBP10.33□□□□□ -0.76
CHD6-206ENST00000470470 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
CHD6-206ENST00000470470 TBC1D12O60347 775 aa10.32□□□□□ -0.76
CHD6-206ENST00000470470 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
CHD6-206ENST00000470470 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
CHD6-206ENST00000470470 HS6ST3Q8IZP7 471 aa10.31□□□□□ -0.76
CHD6-206ENST00000470470 PEG3Q9GZU2 1588 aa10.3□□□□□ -0.76
CHD6-206ENST00000470470 IFFO2Q5TF58 517 aa10.3□□□□□ -0.76
CHD6-206ENST00000470470 PSEN2P49810 448 aa10.29□□□□□ -0.76
CHD6-206ENST00000470470 KCNH8Q96L42 1107 aa10.28□□□□□ -0.76
CHD6-206ENST00000470470 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
CHD6-206ENST00000470470 DSG2Q14126 1118 aa10.27□□□□□ -0.77
CHD6-206ENST00000470470 SMARCA2P51531 1590 aa10.25□□□□□ -0.77
CHD6-206ENST00000470470 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
CHD6-206ENST00000470470 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
CHD6-206ENST00000470470 A0A0G2JS52 829 aa10.21□□□□□ -0.78
CHD6-206ENST00000470470 KCNK17Q96T54 332 aa10.21□□□□□ -0.78
CHD6-206ENST00000470470 DNAJC5Q9H3Z4 198 aa10.21□□□□□ -0.78
CHD6-206ENST00000470470 RYDENQ9NUL5 291 aaKnown RBP10.21□□□□□ -0.78
CHD6-206ENST00000470470 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
CHD6-206ENST00000470470 PTPN5P54829 565 aa10.2□□□□□ -0.78
CHD6-206ENST00000470470 OXER1Q8TDS5 423 aa10.2□□□□□ -0.78
CHD6-206ENST00000470470 SLC4A5Q9BY07 1137 aa10.18□□□□□ -0.78
CHD6-206ENST00000470470 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
CHD6-206ENST00000470470 CHGAP10645 457 aaKnown RBP10.17□□□□□ -0.78
CHD6-206ENST00000470470 CRISPLD2Q9H0B8 497 aa10.17□□□□□ -0.78
CHD6-206ENST00000470470 BCL2L12Q9HB09 334 aa10.17□□□□□ -0.78
CHD6-206ENST00000470470 VPS9D1Q9Y2B5 631 aa10.17□□□□□ -0.78
CHD6-206ENST00000470470 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
CHD6-206ENST00000470470 BBXQ8WY36 941 aaPredicted RBP10.14□□□□□ -0.79
CHD6-206ENST00000470470 PPP1R15BQ5SWA1 713 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms