RNA–Protein interactions for RNA: ENST00000469312.6

LINC01140-203, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 5 BASIC

Gene LINC01140, Length 1,298 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-203ENST00000469312 PHLDB1Q86UU1 1377 aa18.79■□□□□ 0.6
LINC01140-203ENST00000469312 FRMPD1Q5SYB0 1578 aa18.78■□□□□ 0.6
LINC01140-203ENST00000469312 PLCH2O75038 1416 aa18.76■□□□□ 0.59
LINC01140-203ENST00000469312 AKNAQ7Z591 1439 aa18.76■□□□□ 0.59
LINC01140-203ENST00000469312 ARHGAP5Q13017 1502 aa18.76■□□□□ 0.59
LINC01140-203ENST00000469312 PREX2Q70Z35 1606 aa18.76■□□□□ 0.59
LINC01140-203ENST00000469312 RICTORQ6R327 1708 aa18.76■□□□□ 0.59
LINC01140-203ENST00000469312 CDC42BPBQ9Y5S2 1711 aa18.74■□□□□ 0.59
LINC01140-203ENST00000469312 CNKSR2Q8WXI2 1034 aa18.74■□□□□ 0.59
LINC01140-203ENST00000469312 CDC42BPAQ5VT25 1732 aa18.74■□□□□ 0.59
LINC01140-203ENST00000469312 DENND4BO75064 1496 aaPredicted RBP18.72■□□□□ 0.59
LINC01140-203ENST00000469312 ADGRL1O94910 1474 aa18.72■□□□□ 0.59
LINC01140-203ENST00000469312 RAPGEF3O95398 923 aa18.72■□□□□ 0.59
LINC01140-203ENST00000469312 VPS8Q8N3P4 1428 aa18.72■□□□□ 0.59
LINC01140-203ENST00000469312 MTUS2Q5JR59 1369 aa18.71■□□□□ 0.59
LINC01140-203ENST00000469312 EHBP1L1Q8N3D4 1523 aa18.71■□□□□ 0.59
LINC01140-203ENST00000469312 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
LINC01140-203ENST00000469312 TIAM1Q13009 1591 aa18.68■□□□□ 0.58
LINC01140-203ENST00000469312 EFCAB2Q5VUJ9 269 aa18.67■□□□□ 0.58
LINC01140-203ENST00000469312 ARHGEF40Q8TER5 1519 aa18.67■□□□□ 0.58
LINC01140-203ENST00000469312 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
LINC01140-203ENST00000469312 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
LINC01140-203ENST00000469312 ZMYM4Q5VZL5 1548 aa18.65■□□□□ 0.58
LINC01140-203ENST00000469312 ITSN2Q9NZM3 1697 aa18.64■□□□□ 0.57
LINC01140-203ENST00000469312 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
LINC01140-203ENST00000469312 ABCC1P33527 1531 aa18.64■□□□□ 0.57
LINC01140-203ENST00000469312 SUPT6HQ7KZ85 1726 aaKnown RBP18.63■□□□□ 0.57
LINC01140-203ENST00000469312 ZFYVE16Q7Z3T8 1539 aa18.63■□□□□ 0.57
LINC01140-203ENST00000469312 SAMD9LQ8IVG5 1584 aa18.61■□□□□ 0.57
LINC01140-203ENST00000469312 KDM4FA0A1W2PPD8 638 aa18.61■□□□□ 0.57
LINC01140-203ENST00000469312 GPATCH8Q9UKJ3 1502 aaKnown RBP18.6■□□□□ 0.57
LINC01140-203ENST00000469312 CCNB3Q8WWL7 1395 aa18.6■□□□□ 0.57
LINC01140-203ENST00000469312 ZNF518AQ6AHZ1 1483 aa18.59■□□□□ 0.57
LINC01140-203ENST00000469312 APLP2Q06481 763 aa18.58■□□□□ 0.56
LINC01140-203ENST00000469312 KDM5CP41229 1560 aa18.58■□□□□ 0.56
LINC01140-203ENST00000469312 YEATS2Q9ULM3 1422 aa18.57■□□□□ 0.56
LINC01140-203ENST00000469312 HECW2Q9P2P5 1572 aa18.57■□□□□ 0.56
LINC01140-203ENST00000469312 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
LINC01140-203ENST00000469312 SYCP2Q9BX26 1530 aa18.57■□□□□ 0.56
LINC01140-203ENST00000469312 LRRC9Q6ZRR7 1453 aa18.56■□□□□ 0.56
LINC01140-203ENST00000469312 MAGI2Q86UL8 1455 aa18.56■□□□□ 0.56
LINC01140-203ENST00000469312 ARHGEF12Q9NZN5 1544 aa18.55■□□□□ 0.56
LINC01140-203ENST00000469312 NCOA2Q15596 1464 aa18.55■□□□□ 0.56
LINC01140-203ENST00000469312 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
LINC01140-203ENST00000469312 BCORL1Q5H9F3 1711 aa18.54■□□□□ 0.56
LINC01140-203ENST00000469312 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
LINC01140-203ENST00000469312 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
LINC01140-203ENST00000469312 CFDP1Q9UEE9 299 aaPredicted RBP18.53■□□□□ 0.56
LINC01140-203ENST00000469312 ARID4BQ4LE39 1312 aaPredicted RBP18.52■□□□□ 0.56
LINC01140-203ENST00000469312 TRAPPC8Q9Y2L5 1435 aa18.52■□□□□ 0.56
LINC01140-203ENST00000469312 MYT1LQ9UL68 1186 aa18.52■□□□□ 0.56
LINC01140-203ENST00000469312 AFAP1Q8N556 730 aa18.51■□□□□ 0.55
LINC01140-203ENST00000469312 ABCA6Q8N139 1617 aa18.51■□□□□ 0.55
LINC01140-203ENST00000469312 PLEKHH2Q8IVE3 1493 aa18.5■□□□□ 0.55
LINC01140-203ENST00000469312 DIP2CQ9Y2E4 1556 aa18.5■□□□□ 0.55
LINC01140-203ENST00000469312 ADAMTSL3P82987 1691 aa18.5■□□□□ 0.55
LINC01140-203ENST00000469312 C9orf84Q5VXU9 1444 aa18.49■□□□□ 0.55
LINC01140-203ENST00000469312 MADDQ8WXG6 1647 aa18.48■□□□□ 0.55
LINC01140-203ENST00000469312 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
LINC01140-203ENST00000469312 ATP10AO60312 1499 aa18.47■□□□□ 0.55
LINC01140-203ENST00000469312 KANK4Q5T7N3 995 aaPredicted RBP18.47■□□□□ 0.55
LINC01140-203ENST00000469312 MLH3Q9UHC1 1453 aa18.46■□□□□ 0.55
LINC01140-203ENST00000469312 CAMSAP2Q08AD1 1489 aa18.46■□□□□ 0.54
LINC01140-203ENST00000469312 RIMS1Q86UR5 1692 aaKnown RBP18.45■□□□□ 0.54
LINC01140-203ENST00000469312 HNRNPMP52272 730 aaKnown RBP eCLIP18.45■□□□□ 0.54
LINC01140-203ENST00000469312 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
LINC01140-203ENST00000469312 INO80Q9ULG1 1556 aaPredicted RBP18.44■□□□□ 0.54
LINC01140-203ENST00000469312 FER1L4A9Z1Z3 1794 aa18.43■□□□□ 0.54
LINC01140-203ENST00000469312 ZNF644Q9H582 1327 aaPredicted RBP18.43■□□□□ 0.54
LINC01140-203ENST00000469312 ATP7AQ04656 1500 aa18.43■□□□□ 0.54
LINC01140-203ENST00000469312 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
LINC01140-203ENST00000469312 SPAG9O60271 1321 aaKnown RBP18.4■□□□□ 0.54
LINC01140-203ENST00000469312 MLECQ14165 292 aa18.39■□□□□ 0.53
LINC01140-203ENST00000469312 MYOM3Q5VTT5 1437 aa18.39■□□□□ 0.53
LINC01140-203ENST00000469312 MBD5Q9P267 1494 aa18.39■□□□□ 0.53
LINC01140-203ENST00000469312 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
LINC01140-203ENST00000469312 PTPRMP28827 1452 aa18.37■□□□□ 0.53
LINC01140-203ENST00000469312 ADGBQ8N7X0 1667 aa18.36■□□□□ 0.53
LINC01140-203ENST00000469312 ARHGEF5Q12774 1597 aa18.35■□□□□ 0.53
LINC01140-203ENST00000469312 MIA2Q96PC5 1412 aa18.33■□□□□ 0.53
LINC01140-203ENST00000469312 PTPN23Q9H3S7 1636 aa18.33■□□□□ 0.52
LINC01140-203ENST00000469312 AGLP35573 1532 aa18.33■□□□□ 0.52
LINC01140-203ENST00000469312 PLXNC1O60486 1568 aa18.31■□□□□ 0.52
LINC01140-203ENST00000469312 A2MP01023 1474 aa18.31■□□□□ 0.52
LINC01140-203ENST00000469312 RSPH4AQ5TD94 716 aa18.3■□□□□ 0.52
LINC01140-203ENST00000469312 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
LINC01140-203ENST00000469312 CROCC2H7BZ55 1655 aa18.29■□□□□ 0.52
LINC01140-203ENST00000469312 RTEL1-TNFRSF6BF6WH68 1400 aa18.29■□□□□ 0.52
LINC01140-203ENST00000469312 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.52
LINC01140-203ENST00000469312 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
LINC01140-203ENST00000469312 MAST1Q9Y2H9 1570 aa18.26■□□□□ 0.51
LINC01140-203ENST00000469312 DNMT1P26358 1616 aaKnown RBP18.23■□□□□ 0.51
LINC01140-203ENST00000469312 C3P01024 1663 aa18.23■□□□□ 0.51
LINC01140-203ENST00000469312 TCOF1Q13428 1488 aaKnown RBP18.23■□□□□ 0.51
LINC01140-203ENST00000469312 TSPY4P0CV99 314 aa18.23■□□□□ 0.51
LINC01140-203ENST00000469312 TSPY10P0CW01 314 aa18.23■□□□□ 0.51
LINC01140-203ENST00000469312 CLTCQ00610 1675 aaKnown RBP18.22■□□□□ 0.51
LINC01140-203ENST00000469312 ESF1Q9H501 851 aaKnown RBP18.22■□□□□ 0.51
LINC01140-203ENST00000469312 MROH2AA6NES4 1674 aa18.2■□□□□ 0.5
LINC01140-203ENST00000469312 DHX29Q7Z478 1369 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms