RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.69
U2AF1-207ENST00000468039 ILDR1Q86SU0 546 aaPredicted RBP10.7□□□□□ -0.7
U2AF1-207ENST00000468039 IRX2Q9BZI1 471 aaPredicted RBP10.7□□□□□ -0.7
U2AF1-207ENST00000468039 LSM11P83369 360 aaKnown RBP eCLIP10.69□□□□□ -0.7
U2AF1-207ENST00000468039 RGS20O76081 388 aa10.68□□□□□ -0.7
U2AF1-207ENST00000468039 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
U2AF1-207ENST00000468039 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
U2AF1-207ENST00000468039 DPY19L2Q6NUT2 758 aa10.63□□□□□ -0.71
U2AF1-207ENST00000468039 PDAP1Q13442 181 aaKnown RBP10.62□□□□□ -0.71
U2AF1-207ENST00000468039 GPR153Q6NV75 609 aa10.61□□□□□ -0.71
U2AF1-207ENST00000468039 PSEN1P49768 467 aa10.59□□□□□ -0.71
U2AF1-207ENST00000468039 CHGAP10645 457 aaKnown RBP10.58□□□□□ -0.72
U2AF1-207ENST00000468039 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
U2AF1-207ENST00000468039 STK25O00506 426 aa10.57□□□□□ -0.72
U2AF1-207ENST00000468039 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
U2AF1-207ENST00000468039 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
U2AF1-207ENST00000468039 PBX2P40425 430 aa10.55□□□□□ -0.72
U2AF1-207ENST00000468039 STK24Q9Y6E0 443 aa10.54□□□□□ -0.72
U2AF1-207ENST00000468039 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
U2AF1-207ENST00000468039 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
U2AF1-207ENST00000468039 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
U2AF1-207ENST00000468039 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-207ENST00000468039 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-207ENST00000468039 CABP2Q9NPB3 220 aa10.46□□□□□ -0.73
U2AF1-207ENST00000468039 ARSIQ5FYB1 569 aa10.45□□□□□ -0.74
U2AF1-207ENST00000468039 IFFO2Q5TF58 517 aa10.42□□□□□ -0.74
U2AF1-207ENST00000468039 DNAJC5Q9H3Z4 198 aa10.4□□□□□ -0.74
U2AF1-207ENST00000468039 ABCC9O60706 1549 aa10.39□□□□□ -0.75
U2AF1-207ENST00000468039 RYDENQ9NUL5 291 aaKnown RBP10.39□□□□□ -0.75
U2AF1-207ENST00000468039 Q6ZNB5 142 aa10.38□□□□□ -0.75
U2AF1-207ENST00000468039 EFCAB3Q8N7B9 438 aa10.38□□□□□ -0.75
U2AF1-207ENST00000468039 SOX12O15370 315 aa10.37□□□□□ -0.75
U2AF1-207ENST00000468039 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
U2AF1-207ENST00000468039 TMEM92Q6UXU6 159 aa10.35□□□□□ -0.75
U2AF1-207ENST00000468039 NLRP6P59044 892 aa10.34□□□□□ -0.75
U2AF1-207ENST00000468039 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
U2AF1-207ENST00000468039 PAXIP1Q6ZW49 1069 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-207ENST00000468039 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
U2AF1-207ENST00000468039 AXIN2Q9Y2T1 843 aa10.33□□□□□ -0.76
U2AF1-207ENST00000468039 A0A0G2JS52 829 aa10.32□□□□□ -0.76
U2AF1-207ENST00000468039 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
U2AF1-207ENST00000468039 POTEEQ6S8J3 1075 aa10.31□□□□□ -0.76
U2AF1-207ENST00000468039 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
U2AF1-207ENST00000468039 KHSRPQ92945 711 aaKnown RBP eCLIP10.3□□□□□ -0.76
U2AF1-207ENST00000468039 PHF8Q9UPP1 1060 aa10.29□□□□□ -0.76
U2AF1-207ENST00000468039 PLCB2Q00722 1185 aa10.28□□□□□ -0.76
U2AF1-207ENST00000468039 KCTD12Q96CX2 325 aaKnown RBP10.28□□□□□ -0.76
U2AF1-207ENST00000468039 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
U2AF1-207ENST00000468039 TK2O00142 265 aa10.27□□□□□ -0.77
U2AF1-207ENST00000468039 ARHGAP33O14559 1287 aa10.25□□□□□ -0.77
U2AF1-207ENST00000468039 GTPBP6O43824 516 aaPredicted RBP10.25□□□□□ -0.77
U2AF1-207ENST00000468039 HRO43593 1189 aa10.24□□□□□ -0.77
U2AF1-207ENST00000468039 FBXO22Q8NEZ5 403 aa10.23□□□□□ -0.77
U2AF1-207ENST00000468039 STAC3Q96MF2 364 aa10.22□□□□□ -0.77
U2AF1-207ENST00000468039 LHX6Q9UPM6 363 aa10.19□□□□□ -0.78
U2AF1-207ENST00000468039 NUDT7P0C024 238 aa10.18□□□□□ -0.78
U2AF1-207ENST00000468039 MS4A4AQ96JQ5 239 aa10.18□□□□□ -0.78
U2AF1-207ENST00000468039 HAP1P54257 671 aaPredicted RBP10.17□□□□□ -0.78
U2AF1-207ENST00000468039 LAPTM4AQ15012 233 aa10.17□□□□□ -0.78
U2AF1-207ENST00000468039 PSDA5PKW4 1024 aaPredicted RBP10.15□□□□□ -0.78
U2AF1-207ENST00000468039 PTPN5P54829 565 aa10.15□□□□□ -0.78
U2AF1-207ENST00000468039 SLC24A1O60721 1099 aa10.14□□□□□ -0.79
U2AF1-207ENST00000468039 PPP1R37O75864 691 aa10.13□□□□□ -0.79
U2AF1-207ENST00000468039 TRAF7Q6Q0C0 670 aa10.11□□□□□ -0.79
U2AF1-207ENST00000468039 DMRTA1Q5VZB9 504 aa10.06□□□□□ -0.8
U2AF1-207ENST00000468039 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
U2AF1-207ENST00000468039 PCDHGA4Q9Y5G9 962 aa10.04□□□□□ -0.8
U2AF1-207ENST00000468039 LCE2BO14633 110 aa10.03□□□□□ -0.8
U2AF1-207ENST00000468039 SLC34A2O95436 690 aa10.02□□□□□ -0.81
U2AF1-207ENST00000468039 PSEN2P49810 448 aa10.01□□□□□ -0.81
U2AF1-207ENST00000468039 TMC2Q8TDI7 906 aa10□□□□□ -0.81
U2AF1-207ENST00000468039 PDE4AP27815 886 aa9.99□□□□□ -0.81
U2AF1-207ENST00000468039 THSD4Q6ZMP0 1018 aa9.99□□□□□ -0.81
U2AF1-207ENST00000468039 VSIG10Q8N0Z9 540 aa9.99□□□□□ -0.81
U2AF1-207ENST00000468039 WDR70Q9NW82 654 aa9.98□□□□□ -0.81
U2AF1-207ENST00000468039 CADPS2Q86UW7 1296 aa9.97□□□□□ -0.81
U2AF1-207ENST00000468039 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
U2AF1-207ENST00000468039 ZCCHC6Q5VYS8 1495 aaKnown RBP9.95□□□□□ -0.82
U2AF1-207ENST00000468039 GFRA3O60609 400 aa9.94□□□□□ -0.82
U2AF1-207ENST00000468039 ZNF787Q6DD87 383 aa9.94□□□□□ -0.82
U2AF1-207ENST00000468039 LARP6Q9BRS8 491 aaKnown RBP9.94□□□□□ -0.82
U2AF1-207ENST00000468039 RB1CC1Q8TDY2 1594 aa9.93□□□□□ -0.82
U2AF1-207ENST00000468039 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
U2AF1-207ENST00000468039 ZNF775Q96BV0 537 aaPredicted RBP9.92□□□□□ -0.82
U2AF1-207ENST00000468039 CRISPLD2Q9H0B8 497 aa9.92□□□□□ -0.82
U2AF1-207ENST00000468039 NACADO15069 1562 aa9.92□□□□□ -0.82
U2AF1-207ENST00000468039 NCKAP5LQ9HCH0 1330 aa9.91□□□□□ -0.82
U2AF1-207ENST00000468039 KIF3CO14782 793 aa9.91□□□□□ -0.82
U2AF1-207ENST00000468039 ITGBL1O95965 494 aaPredicted RBP9.91□□□□□ -0.82
U2AF1-207ENST00000468039 DDX27Q96GQ7 796 aaKnown RBP9.91□□□□□ -0.82
U2AF1-207ENST00000468039 C2orf72A6NCS6 295 aa9.9□□□□□ -0.82
U2AF1-207ENST00000468039 PPP4R3BQ5MIZ7 849 aa9.9□□□□□ -0.82
U2AF1-207ENST00000468039 VPS9D1Q9Y2B5 631 aa9.9□□□□□ -0.82
U2AF1-207ENST00000468039 GOLGA8CPA6NN73 597 aa9.88□□□□□ -0.83
U2AF1-207ENST00000468039 PPP1R15BQ5SWA1 713 aa9.88□□□□□ -0.83
U2AF1-207ENST00000468039 MFSD10Q14728 455 aa9.87□□□□□ -0.83
U2AF1-207ENST00000468039 WNT2BQ93097 391 aa9.87□□□□□ -0.83
U2AF1-207ENST00000468039 KDM2AQ9Y2K7 1162 aa9.87□□□□□ -0.83
U2AF1-207ENST00000468039 FOXK1P85037 733 aa9.86□□□□□ -0.83
U2AF1-207ENST00000468039 DSG2Q14126 1118 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms