RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-216ENST00000467134 ADGBQ8N7X0 1667 aa16.57■□□□□ 0.24
MUC1-216ENST00000467134 PLEKHH2Q8IVE3 1493 aa16.56■□□□□ 0.24
MUC1-216ENST00000467134 SHANK2Q9UPX8 1470 aa16.55■□□□□ 0.24
MUC1-216ENST00000467134 ASXL2Q76L83 1435 aa16.55■□□□□ 0.24
MUC1-216ENST00000467134 FAM50AQ14320 339 aaKnown RBP16.55■□□□□ 0.24
MUC1-216ENST00000467134 HRCP23327 699 aa16.54■□□□□ 0.24
MUC1-216ENST00000467134 SAMD9LQ8IVG5 1584 aa16.54■□□□□ 0.24
MUC1-216ENST00000467134 CFDP1Q9UEE9 299 aaPredicted RBP16.53■□□□□ 0.24
MUC1-216ENST00000467134 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
MUC1-216ENST00000467134 PLCH2O75038 1416 aa16.53■□□□□ 0.24
MUC1-216ENST00000467134 DAPK1P53355 1430 aa16.53■□□□□ 0.24
MUC1-216ENST00000467134 ROCK1Q13464 1354 aa16.52■□□□□ 0.24
MUC1-216ENST00000467134 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.24
MUC1-216ENST00000467134 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.23
MUC1-216ENST00000467134 ADGRL2O95490 1459 aa16.51■□□□□ 0.23
MUC1-216ENST00000467134 SETD5Q9C0A6 1442 aa16.51■□□□□ 0.23
MUC1-216ENST00000467134 CFAP74Q9C0B2 1584 aa16.51■□□□□ 0.23
MUC1-216ENST00000467134 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
MUC1-216ENST00000467134 ARHGAP5Q13017 1502 aa16.5■□□□□ 0.23
MUC1-216ENST00000467134 ACIN1Q9UKV3 1341 aaKnown RBP16.5■□□□□ 0.23
MUC1-216ENST00000467134 ABCC5O15440 1437 aa16.5■□□□□ 0.23
MUC1-216ENST00000467134 PTPRKQ15262 1439 aa16.5■□□□□ 0.23
MUC1-216ENST00000467134 GLI2P10070 1586 aa16.5■□□□□ 0.23
MUC1-216ENST00000467134 ABCC1P33527 1531 aa16.47■□□□□ 0.23
MUC1-216ENST00000467134 MBD5Q9P267 1494 aa16.47■□□□□ 0.23
MUC1-216ENST00000467134 ZEB1P37275 1124 aaPredicted RBP16.46■□□□□ 0.23
MUC1-216ENST00000467134 RSPH4AQ5TD94 716 aa16.46■□□□□ 0.23
MUC1-216ENST00000467134 CCDC141Q6ZP82 1450 aa16.46■□□□□ 0.23
MUC1-216ENST00000467134 NAIPQ13075 1403 aa16.45■□□□□ 0.22
MUC1-216ENST00000467134 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
MUC1-216ENST00000467134 MAP3K4Q9Y6R4 1608 aa16.44■□□□□ 0.22
MUC1-216ENST00000467134 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
MUC1-216ENST00000467134 PLXNC1O60486 1568 aa16.43■□□□□ 0.22
MUC1-216ENST00000467134 SYCP2Q9BX26 1530 aa16.42■□□□□ 0.22
MUC1-216ENST00000467134 EFCAB2Q5VUJ9 269 aa16.42■□□□□ 0.22
MUC1-216ENST00000467134 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
MUC1-216ENST00000467134 ITGAEP38570 1179 aa16.4■□□□□ 0.22
MUC1-216ENST00000467134 DIP2BQ9P265 1576 aa16.39■□□□□ 0.21
MUC1-216ENST00000467134 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
MUC1-216ENST00000467134 KCNH8Q96L42 1107 aa16.39■□□□□ 0.21
MUC1-216ENST00000467134 FANCAO15360 1455 aa16.39■□□□□ 0.21
MUC1-216ENST00000467134 NCOA1Q15788 1441 aa16.38■□□□□ 0.21
MUC1-216ENST00000467134 C9orf84Q5VXU9 1444 aa16.38■□□□□ 0.21
MUC1-216ENST00000467134 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
MUC1-216ENST00000467134 NEO1Q92859 1461 aa16.37■□□□□ 0.21
MUC1-216ENST00000467134 DHX57Q6P158 1386 aaKnown RBP16.37■□□□□ 0.21
MUC1-216ENST00000467134 CCER1Q8TC90 406 aaPredicted RBP16.36■□□□□ 0.21
MUC1-216ENST00000467134 ARHGEF12Q9NZN5 1544 aa16.35■□□□□ 0.21
MUC1-216ENST00000467134 CD109Q6YHK3 1445 aa16.35■□□□□ 0.21
MUC1-216ENST00000467134 ZNF777Q9ULD5 760 aaPredicted RBP16.34■□□□□ 0.21
MUC1-216ENST00000467134 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
MUC1-216ENST00000467134 INO80Q9ULG1 1556 aaPredicted RBP16.34■□□□□ 0.21
MUC1-216ENST00000467134 ADGRL1O94910 1474 aa16.31■□□□□ 0.2
MUC1-216ENST00000467134 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
MUC1-216ENST00000467134 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
MUC1-216ENST00000467134 KIF13AQ9H1H9 1805 aa16.31■□□□□ 0.2
MUC1-216ENST00000467134 KDM6BO15054 1643 aa16.3■□□□□ 0.2
MUC1-216ENST00000467134 KDM5CP41229 1560 aa16.3■□□□□ 0.2
MUC1-216ENST00000467134 ZFYVE16Q7Z3T8 1539 aa16.3■□□□□ 0.2
MUC1-216ENST00000467134 KDM5DQ9BY66 1539 aa16.29■□□□□ 0.2
MUC1-216ENST00000467134 DUOX2Q9NRD8 1548 aa16.29■□□□□ 0.2
MUC1-216ENST00000467134 PPRC1Q5VV67 1664 aaKnown RBP16.28■□□□□ 0.2
MUC1-216ENST00000467134 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.2
MUC1-216ENST00000467134 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
MUC1-216ENST00000467134 ANKRD50Q9ULJ7 1429 aa16.27■□□□□ 0.19
MUC1-216ENST00000467134 TRAPPC8Q9Y2L5 1435 aa16.27■□□□□ 0.19
MUC1-216ENST00000467134 UNC13BO14795 1591 aa16.26■□□□□ 0.19
MUC1-216ENST00000467134 ATP7AQ04656 1500 aa16.26■□□□□ 0.19
MUC1-216ENST00000467134 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
MUC1-216ENST00000467134 TEX14Q8IWB6 1497 aa16.26■□□□□ 0.19
MUC1-216ENST00000467134 EIF2AK4Q9P2K8 1649 aaKnown RBP16.26■□□□□ 0.19
MUC1-216ENST00000467134 KIF15Q9NS87 1388 aa16.26■□□□□ 0.19
MUC1-216ENST00000467134 RRP7BPQ9NSQ0 103 aa16.25■□□□□ 0.19
MUC1-216ENST00000467134 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
MUC1-216ENST00000467134 ERBINQ96RT1 1412 aa16.25■□□□□ 0.19
MUC1-216ENST00000467134 SCAPERQ9BY12 1400 aa16.25■□□□□ 0.19
MUC1-216ENST00000467134 RICTORQ6R327 1708 aa16.25■□□□□ 0.19
MUC1-216ENST00000467134 HECW2Q9P2P5 1572 aa16.23■□□□□ 0.19
MUC1-216ENST00000467134 KIDINS220Q9ULH0 1771 aa16.23■□□□□ 0.19
MUC1-216ENST00000467134 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
MUC1-216ENST00000467134 BCORL1Q5H9F3 1711 aa16.22■□□□□ 0.19
MUC1-216ENST00000467134 MAGI2Q86UL8 1455 aa16.22■□□□□ 0.19
MUC1-216ENST00000467134 ZMYM4Q5VZL5 1548 aa16.21■□□□□ 0.19
MUC1-216ENST00000467134 DEPDC5O75140 1603 aa16.21■□□□□ 0.19
MUC1-216ENST00000467134 DENND4BO75064 1496 aaPredicted RBP16.2■□□□□ 0.18
MUC1-216ENST00000467134 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
MUC1-216ENST00000467134 IQGAP3Q86VI3 1631 aa16.19■□□□□ 0.18
MUC1-216ENST00000467134 PZPP20742 1482 aa16.17■□□□□ 0.18
MUC1-216ENST00000467134 FRMPD1Q5SYB0 1578 aa16.17■□□□□ 0.18
MUC1-216ENST00000467134 TSPOAP1O95153 1857 aa16.15■□□□□ 0.18
MUC1-216ENST00000467134 FAM69CQ0P6D2 419 aa16.14■□□□□ 0.17
MUC1-216ENST00000467134 TIMELESSQ9UNS1 1208 aa16.14■□□□□ 0.17
MUC1-216ENST00000467134 RNF17Q9BXT8 1623 aaKnown RBP16.14■□□□□ 0.17
MUC1-216ENST00000467134 REREQ9P2R6 1566 aa16.13■□□□□ 0.17
MUC1-216ENST00000467134 ABCA6Q8N139 1617 aa16.12■□□□□ 0.17
MUC1-216ENST00000467134 AFAP1Q8N556 730 aa16.12■□□□□ 0.17
MUC1-216ENST00000467134 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
MUC1-216ENST00000467134 PRDM15P57071 1507 aaPredicted RBP16.11■□□□□ 0.17
MUC1-216ENST00000467134 VWDEQ8N2E2 1590 aa16.11■□□□□ 0.17
MUC1-216ENST00000467134 FAM135AQ9P2D6 1515 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms