RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 CECR2Q9BXF3 1484 aa10.51□□□□□ -0.73
SFPQ-203ENST00000466213 SUPT5HO00267 1087 aaKnown RBP10.5□□□□□ -0.73
SFPQ-203ENST00000466213 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
SFPQ-203ENST00000466213 BAZ1AQ9NRL2 1556 aaPredicted RBP10.5□□□□□ -0.73
SFPQ-203ENST00000466213 EIF4G1Q04637 1599 aaKnown RBP10.47□□□□□ -0.73
SFPQ-203ENST00000466213 MLLT3P42568 568 aaPredicted RBP10.47□□□□□ -0.73
SFPQ-203ENST00000466213 SMYD5Q6GMV2 418 aa10.47□□□□□ -0.73
SFPQ-203ENST00000466213 DDX27Q96GQ7 796 aaKnown RBP10.47□□□□□ -0.73
SFPQ-203ENST00000466213 RBM26Q5T8P6 1007 aaKnown RBP10.46□□□□□ -0.74
SFPQ-203ENST00000466213 PAK3O75914 559 aaPredicted RBP10.44□□□□□ -0.74
SFPQ-203ENST00000466213 GPBP1L1Q9HC44 474 aaPredicted RBP10.44□□□□□ -0.74
SFPQ-203ENST00000466213 SMARCA4P51532 1647 aa10.42□□□□□ -0.74
SFPQ-203ENST00000466213 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
SFPQ-203ENST00000466213 AK7Q96M32 723 aa10.41□□□□□ -0.74
SFPQ-203ENST00000466213 TRPC6Q9Y210 931 aa10.41□□□□□ -0.74
SFPQ-203ENST00000466213 RSF1Q96T23 1441 aaPredicted RBP10.41□□□□□ -0.74
SFPQ-203ENST00000466213 PHF12Q96QT6 1004 aa10.41□□□□□ -0.74
SFPQ-203ENST00000466213 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
SFPQ-203ENST00000466213 CC2D2AQ9P2K1 1620 aa10.38□□□□□ -0.75
SFPQ-203ENST00000466213 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
SFPQ-203ENST00000466213 GPIHBP1Q8IV16 184 aa10.37□□□□□ -0.75
SFPQ-203ENST00000466213 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
SFPQ-203ENST00000466213 TMEM106CQ9BVX2 250 aa10.37□□□□□ -0.75
SFPQ-203ENST00000466213 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
SFPQ-203ENST00000466213 IL27Q8NEV9 243 aa10.36□□□□□ -0.75
SFPQ-203ENST00000466213 TRIM66O15016 1216 aa10.35□□□□□ -0.75
SFPQ-203ENST00000466213 EMILIN3Q9NT22 766 aa10.35□□□□□ -0.75
SFPQ-203ENST00000466213 PPP1R15BQ5SWA1 713 aa10.34□□□□□ -0.75
SFPQ-203ENST00000466213 KDM4CQ9H3R0 1056 aa10.34□□□□□ -0.75
SFPQ-203ENST00000466213 NCAPD3P42695 1498 aa10.34□□□□□ -0.75
SFPQ-203ENST00000466213 BAZ1BQ9UIG0 1483 aaKnown RBP10.34□□□□□ -0.75
SFPQ-203ENST00000466213 CHRDL2Q6WN34 429 aa10.33□□□□□ -0.76
SFPQ-203ENST00000466213 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
SFPQ-203ENST00000466213 KRI1Q8N9T8 703 aaKnown RBP10.33□□□□□ -0.76
SFPQ-203ENST00000466213 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
SFPQ-203ENST00000466213 NPM2Q86SE8 214 aaKnown RBP10.33□□□□□ -0.76
SFPQ-203ENST00000466213 DPYSL4O14531 572 aa10.32□□□□□ -0.76
SFPQ-203ENST00000466213 GPR37O15354 613 aa10.32□□□□□ -0.76
SFPQ-203ENST00000466213 PDE4DQ08499 809 aa10.32□□□□□ -0.76
SFPQ-203ENST00000466213 CD44P16070 742 aaKnown RBP10.31□□□□□ -0.76
SFPQ-203ENST00000466213 MS4A3Q96HJ5 214 aa10.3□□□□□ -0.76
SFPQ-203ENST00000466213 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
SFPQ-203ENST00000466213 SP7Q8TDD2 431 aaPredicted RBP10.29□□□□□ -0.76
SFPQ-203ENST00000466213 PEG3Q9GZU2 1588 aa10.29□□□□□ -0.76
SFPQ-203ENST00000466213 WIZO95785 1651 aa10.28□□□□□ -0.76
SFPQ-203ENST00000466213 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
SFPQ-203ENST00000466213 DSG2Q14126 1118 aa10.28□□□□□ -0.76
SFPQ-203ENST00000466213 PDIA6Q15084 440 aa10.27□□□□□ -0.77
SFPQ-203ENST00000466213 ZMYND15Q9H091 742 aa10.27□□□□□ -0.77
SFPQ-203ENST00000466213 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
SFPQ-203ENST00000466213 DPY19L2Q6NUT2 758 aa10.26□□□□□ -0.77
SFPQ-203ENST00000466213 SPDYE16A6NNV3 312 aaPredicted RBP10.24□□□□□ -0.77
SFPQ-203ENST00000466213 FAM117AQ9C073 453 aa10.24□□□□□ -0.77
SFPQ-203ENST00000466213 TOP2AP11388 1531 aaKnown RBP10.23□□□□□ -0.77
SFPQ-203ENST00000466213 TTLL13PA6NNM8 815 aa10.23□□□□□ -0.77
SFPQ-203ENST00000466213 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
SFPQ-203ENST00000466213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.778e-13■□□□□ 8.7
SFPQ-203ENST00000466213 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
SFPQ-203ENST00000466213 TIE1P35590 1138 aa10.19□□□□□ -0.78
SFPQ-203ENST00000466213 FOXK1P85037 733 aa10.19□□□□□ -0.78
SFPQ-203ENST00000466213 MICALL2Q8IY33 904 aa10.18□□□□□ -0.78
SFPQ-203ENST00000466213 BMP2KQ9NSY1 1161 aaPredicted RBP10.18□□□□□ -0.78
SFPQ-203ENST00000466213 RSPH6AQ9H0K4 717 aa10.17□□□□□ -0.78
SFPQ-203ENST00000466213 MINK1Q8N4C8 1332 aaPredicted RBP10.16□□□□□ -0.78
SFPQ-203ENST00000466213 ZNF316A6NFI3 1004 aaPredicted RBP10.16□□□□□ -0.78
SFPQ-203ENST00000466213 PLPP6Q8IY26 295 aa10.15□□□□□ -0.79
SFPQ-203ENST00000466213 CCDC102AQ96A19 550 aa10.15□□□□□ -0.79
SFPQ-203ENST00000466213 C1orf115Q9H7X2 142 aa10.15□□□□□ -0.79
SFPQ-203ENST00000466213 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
SFPQ-203ENST00000466213 GRXCR2A6NFK2 248 aa10.14□□□□□ -0.79
SFPQ-203ENST00000466213 IRF6O14896 467 aa10.14□□□□□ -0.79
SFPQ-203ENST00000466213 FECHP22830 423 aa10.14□□□□□ -0.79
SFPQ-203ENST00000466213 TRIM35Q9UPQ4 493 aa10.14□□□□□ -0.79
SFPQ-203ENST00000466213 C19orf67A6NJJ6 358 aa10.13□□□□□ -0.79
SFPQ-203ENST00000466213 KIF3CO14782 793 aa10.13□□□□□ -0.79
SFPQ-203ENST00000466213 OSBPP22059 807 aa10.13□□□□□ -0.79
SFPQ-203ENST00000466213 MAP2K5Q13163 448 aa10.13□□□□□ -0.79
SFPQ-203ENST00000466213 PDCD7Q8N8D1 485 aaKnown RBP10.13□□□□□ -0.79
SFPQ-203ENST00000466213 C2orf72A6NCS6 295 aa10.12□□□□□ -0.79
SFPQ-203ENST00000466213 AMHR2Q16671 573 aa10.12□□□□□ -0.79
SFPQ-203ENST00000466213 PARP9Q8IXQ6 854 aa10.12□□□□□ -0.79
SFPQ-203ENST00000466213 TMC2Q8TDI7 906 aa10.12□□□□□ -0.79
SFPQ-203ENST00000466213 NUTM2FA1L443 756 aa10.11□□□□□ -0.79
SFPQ-203ENST00000466213 CADPSQ9ULU8 1353 aa10.11□□□□□ -0.79
SFPQ-203ENST00000466213 PRIM1P49642 420 aaKnown RBP10.1□□□□□ -0.79
SFPQ-203ENST00000466213 TMEM121BQ9BXQ6 578 aaPredicted RBP10.1□□□□□ -0.79
SFPQ-203ENST00000466213 GNPATO15228 680 aa10.07□□□□□ -0.8
SFPQ-203ENST00000466213 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
SFPQ-203ENST00000466213 TRIM26Q12899 539 aaPredicted RBP10.07□□□□□ -0.8
SFPQ-203ENST00000466213 DDRGK1Q96HY6 314 aa10.07□□□□□ -0.8
SFPQ-203ENST00000466213 MAP3K9P80192 1104 aa10.07□□□□□ -0.8
SFPQ-203ENST00000466213 PDS5BQ9NTI5 1447 aa10.06□□□□□ -0.8
SFPQ-203ENST00000466213 ONECUT3O60422 494 aaPredicted RBP10.05□□□□□ -0.8
SFPQ-203ENST00000466213 PTGER2P43116 358 aa10.05□□□□□ -0.8
SFPQ-203ENST00000466213 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
SFPQ-203ENST00000466213 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
SFPQ-203ENST00000466213 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.82e-13■□□□□ 9.3
SFPQ-203ENST00000466213 ARID3CA6NKF2 412 aa10.03□□□□□ -0.8
SFPQ-203ENST00000466213 HIC1Q14526 733 aa10.03□□□□□ -0.8
SFPQ-203ENST00000466213 OXER1Q8TDS5 423 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms