RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 PLA2G2EQ9NZK7 142 aa7.75□□□□□ -1.17
CCDC93-205ENST00000466171 GPR153Q6NV75 609 aa7.74□□□□□ -1.17
CCDC93-205ENST00000466171 RNF25Q96BH1 459 aaPredicted RBP7.74□□□□□ -1.17
CCDC93-205ENST00000466171 ANKRD13DQ6ZTN6 518 aa7.73□□□□□ -1.17
CCDC93-205ENST00000466171 TMEM92Q6UXU6 159 aa7.72□□□□□ -1.17
CCDC93-205ENST00000466171 ZSWIM6Q9HCJ5 1215 aa7.72□□□□□ -1.17
CCDC93-205ENST00000466171 ECM2O94769 699 aaPredicted RBP7.71□□□□□ -1.18
CCDC93-205ENST00000466171 LSM11P83369 360 aaKnown RBP eCLIP7.7□□□□□ -1.18
CCDC93-205ENST00000466171 NLRP6P59044 892 aa7.69□□□□□ -1.18
CCDC93-205ENST00000466171 BCL11BQ9C0K0 894 aaPredicted RBP7.69□□□□□ -1.18
CCDC93-205ENST00000466171 PHF8Q9UPP1 1060 aa7.69□□□□□ -1.18
CCDC93-205ENST00000466171 STK24Q9Y6E0 443 aa7.69□□□□□ -1.18
CCDC93-205ENST00000466171 MICALL2Q8IY33 904 aa7.68□□□□□ -1.18
CCDC93-205ENST00000466171 STK25O00506 426 aa7.66□□□□□ -1.18
CCDC93-205ENST00000466171 MS4A4AQ96JQ5 239 aa7.64□□□□□ -1.19
CCDC93-205ENST00000466171 ARSIQ5FYB1 569 aa7.63□□□□□ -1.19
CCDC93-205ENST00000466171 KHSRPQ92945 711 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC93-205ENST00000466171 ZNF316A6NFI3 1004 aaPredicted RBP7.62□□□□□ -1.19
CCDC93-205ENST00000466171 HCSTQ9UBK5 93 aa7.62□□□□□ -1.19
CCDC93-205ENST00000466171 POTEEQ6S8J3 1075 aa7.61□□□□□ -1.19
CCDC93-205ENST00000466171 PKD2Q13563 968 aa7.6□□□□□ -1.19
CCDC93-205ENST00000466171 RGL2O15211 777 aa7.59□□□□□ -1.19
CCDC93-205ENST00000466171 FBXO22Q8NEZ5 403 aa7.59□□□□□ -1.19
CCDC93-205ENST00000466171 MFRPQ9BY79 579 aa7.58□□□□□ -1.2
CCDC93-205ENST00000466171 AXIN2Q9Y2T1 843 aa7.56□□□□□ -1.2
CCDC93-205ENST00000466171 PBX2P40425 430 aa7.55□□□□□ -1.2
CCDC93-205ENST00000466171 TMC2Q8TDI7 906 aa7.51□□□□□ -1.21
CCDC93-205ENST00000466171 ADGRD1Q6QNK2 874 aa7.5□□□□□ -1.21
CCDC93-205ENST00000466171 IRX2Q9BZI1 471 aaPredicted RBP7.5□□□□□ -1.21
CCDC93-205ENST00000466171 C2orf72A6NCS6 295 aa7.49□□□□□ -1.21
CCDC93-205ENST00000466171 NUDT7P0C024 238 aa7.49□□□□□ -1.21
CCDC93-205ENST00000466171 KIF3CO14782 793 aa7.47□□□□□ -1.21
CCDC93-205ENST00000466171 LHX6Q9UPM6 363 aa7.47□□□□□ -1.21
CCDC93-205ENST00000466171 HS6ST3Q8IZP7 471 aa7.46□□□□□ -1.22
CCDC93-205ENST00000466171 HRO43593 1189 aa7.45□□□□□ -1.22
CCDC93-205ENST00000466171 RGS20O76081 388 aa7.44□□□□□ -1.22
CCDC93-205ENST00000466171 CHGAP10645 457 aaKnown RBP7.44□□□□□ -1.22
CCDC93-205ENST00000466171 RYDENQ9NUL5 291 aaKnown RBP7.44□□□□□ -1.22
CCDC93-205ENST00000466171 SLC34A2O95436 690 aa7.43□□□□□ -1.22
CCDC93-205ENST00000466171 KCTD12Q96CX2 325 aaKnown RBP7.43□□□□□ -1.22
CCDC93-205ENST00000466171 PPP1R37O75864 691 aa7.42□□□□□ -1.22
CCDC93-205ENST00000466171 PCDHGA4Q9Y5G9 962 aa7.42□□□□□ -1.22
CCDC93-205ENST00000466171 ARHGAP33O14559 1287 aa7.4□□□□□ -1.22
CCDC93-205ENST00000466171 DMRTA1Q5VZB9 504 aa7.4□□□□□ -1.22
CCDC93-205ENST00000466171 PSDA5PKW4 1024 aaPredicted RBP7.39□□□□□ -1.23
CCDC93-205ENST00000466171 TK2O00142 265 aa7.39□□□□□ -1.23
CCDC93-205ENST00000466171 A0A0G2JS52 829 aa7.38□□□□□ -1.23
CCDC93-205ENST00000466171 IFFO2Q5TF58 517 aa7.38□□□□□ -1.23
CCDC93-205ENST00000466171 TBC1D12O60347 775 aa7.37□□□□□ -1.23
CCDC93-205ENST00000466171 FOXK1P85037 733 aa7.37□□□□□ -1.23
CCDC93-205ENST00000466171 PSEN2P49810 448 aa7.36□□□□□ -1.23
CCDC93-205ENST00000466171 PLPP6Q8IY26 295 aa7.36□□□□□ -1.23
CCDC93-205ENST00000466171 DNAJC5Q9H3Z4 198 aa7.36□□□□□ -1.23
CCDC93-205ENST00000466171 GPHNQ9NQX3 736 aaPredicted RBP7.36□□□□□ -1.23
CCDC93-205ENST00000466171 PTCD2Q8WV60 388 aaKnown RBP7.34□□□□□ -1.23
CCDC93-205ENST00000466171 PTPN5P54829 565 aa7.32□□□□□ -1.24
CCDC93-205ENST00000466171 DSG2Q14126 1118 aa7.31□□□□□ -1.24
CCDC93-205ENST00000466171 Q6ZNB5 142 aa7.31□□□□□ -1.24
CCDC93-205ENST00000466171 DCAF8L2P0C7V8 631 aa7.3□□□□□ -1.24
CCDC93-205ENST00000466171 NKX1-1Q15270 411 aaPredicted RBP7.3□□□□□ -1.24
CCDC93-205ENST00000466171 KCNH8Q96L42 1107 aa7.3□□□□□ -1.24
CCDC93-205ENST00000466171 KDM4FA0A1W2PPD8 638 aa7.29□□□□□ -1.24
CCDC93-205ENST00000466171 PPP4R3BQ5MIZ7 849 aa7.29□□□□□ -1.24
CCDC93-205ENST00000466171 LCE2BO14633 110 aa7.28□□□□□ -1.24
CCDC93-205ENST00000466171 PDE4AP27815 886 aa7.28□□□□□ -1.24
CCDC93-205ENST00000466171 PPP1R15BQ5SWA1 713 aa7.26□□□□□ -1.25
CCDC93-205ENST00000466171 CRISPLD2Q9H0B8 497 aa7.26□□□□□ -1.25
CCDC93-205ENST00000466171 THSD4Q6ZMP0 1018 aa7.25□□□□□ -1.25
CCDC93-205ENST00000466171 UPF1Q92900 1129 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCDC93-205ENST00000466171 STAC3Q96MF2 364 aa7.25□□□□□ -1.25
CCDC93-205ENST00000466171 OXER1Q8TDS5 423 aa7.24□□□□□ -1.25
CCDC93-205ENST00000466171 GTPBP6O43824 516 aaPredicted RBP7.22□□□□□ -1.25
CCDC93-205ENST00000466171 KCNK17Q96T54 332 aa7.22□□□□□ -1.25
CCDC93-205ENST00000466171 VPS9D1Q9Y2B5 631 aa7.22□□□□□ -1.25
CCDC93-205ENST00000466171 ZNF454Q8N9F8 522 aa7.21□□□□□ -1.26
CCDC93-205ENST00000466171 DDX27Q96GQ7 796 aaKnown RBP7.21□□□□□ -1.26
CCDC93-205ENST00000466171 LARP6Q9BRS8 491 aaKnown RBP7.2□□□□□ -1.26
CCDC93-205ENST00000466171 NCKAP5LQ9HCH0 1330 aa7.19□□□□□ -1.26
CCDC93-205ENST00000466171 MAP3K9P80192 1104 aa7.18□□□□□ -1.26
CCDC93-205ENST00000466171 BHMG1C9JSJ3 638 aaPredicted RBP7.16□□□□□ -1.26
CCDC93-205ENST00000466171 EVI5O60447 810 aa7.16□□□□□ -1.26
CCDC93-205ENST00000466171 PTPREP23469 700 aa7.16□□□□□ -1.26
CCDC93-205ENST00000466171 BCL2L12Q9HB09 334 aa7.16□□□□□ -1.26
CCDC93-205ENST00000466171 ITGBL1O95965 494 aaPredicted RBP7.15□□□□□ -1.26
CCDC93-205ENST00000466171 FOSBP53539 338 aa7.15□□□□□ -1.26
CCDC93-205ENST00000466171 MFSD10Q14728 455 aa7.15□□□□□ -1.26
CCDC93-205ENST00000466171 WNT2BQ93097 391 aa7.15□□□□□ -1.26
CCDC93-205ENST00000466171 JPH4Q96JJ6 628 aa7.15□□□□□ -1.26
CCDC93-205ENST00000466171 ANO8Q9HCE9 1232 aaPredicted RBP7.15□□□□□ -1.26
CCDC93-205ENST00000466171 ZDHHC16Q969W1 377 aa7.13□□□□□ -1.27
CCDC93-205ENST00000466171 SLC4A5Q9BY07 1137 aa7.13□□□□□ -1.27
CCDC93-205ENST00000466171 GOLGA8CPA6NN73 597 aa7.12□□□□□ -1.27
CCDC93-205ENST00000466171 TRAF7Q6Q0C0 670 aa7.11□□□□□ -1.27
CCDC93-205ENST00000466171 LAPTM4AQ15012 233 aa7.09□□□□□ -1.27
CCDC93-205ENST00000466171 MRPL50Q8N5N7 158 aaKnown RBP7.09□□□□□ -1.27
CCDC93-205ENST00000466171 BBXQ8WY36 941 aaPredicted RBP7.09□□□□□ -1.27
CCDC93-205ENST00000466171 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
CCDC93-205ENST00000466171 ZBED2Q9BTP6 218 aa7.08□□□□□ -1.28
CCDC93-205ENST00000466171 ADAM33Q9BZ11 813 aa7.08□□□□□ -1.28
CCDC93-205ENST00000466171 EMILIN3Q9NT22 766 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms