RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 ARHGAP5Q13017 1502 aa19.39■□□□□ 0.69
TMCO3-205ENST00000465556 RAPGEF3O95398 923 aa19.38■□□□□ 0.69
TMCO3-205ENST00000465556 POGZQ7Z3K3 1410 aa19.36■□□□□ 0.69
TMCO3-205ENST00000465556 ITSN2Q9NZM3 1697 aa19.34■□□□□ 0.69
TMCO3-205ENST00000465556 ZFYVE16Q7Z3T8 1539 aa19.33■□□□□ 0.68
TMCO3-205ENST00000465556 EHBP1L1Q8N3D4 1523 aa19.33■□□□□ 0.68
TMCO3-205ENST00000465556 ABCC1P33527 1531 aa19.32■□□□□ 0.68
TMCO3-205ENST00000465556 SCAPERQ9BY12 1400 aa19.32■□□□□ 0.68
TMCO3-205ENST00000465556 BCORL1Q5H9F3 1711 aa19.31■□□□□ 0.68
TMCO3-205ENST00000465556 KDM5CP41229 1560 aa19.31■□□□□ 0.68
TMCO3-205ENST00000465556 SIGLEC1Q9BZZ2 1709 aa19.31■□□□□ 0.68
TMCO3-205ENST00000465556 ADAMTSL3P82987 1691 aa19.3■□□□□ 0.68
TMCO3-205ENST00000465556 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
TMCO3-205ENST00000465556 MAGI2Q86UL8 1455 aa19.29■□□□□ 0.68
TMCO3-205ENST00000465556 EFCAB2Q5VUJ9 269 aa19.29■□□□□ 0.68
TMCO3-205ENST00000465556 HECW2Q9P2P5 1572 aa19.28■□□□□ 0.68
TMCO3-205ENST00000465556 ZNF518AQ6AHZ1 1483 aa19.28■□□□□ 0.68
TMCO3-205ENST00000465556 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.68
TMCO3-205ENST00000465556 TIAM1Q13009 1591 aa19.27■□□□□ 0.67
TMCO3-205ENST00000465556 SAMD9LQ8IVG5 1584 aa19.27■□□□□ 0.67
TMCO3-205ENST00000465556 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
TMCO3-205ENST00000465556 YEATS2Q9ULM3 1422 aa19.26■□□□□ 0.67
TMCO3-205ENST00000465556 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
TMCO3-205ENST00000465556 MADDQ8WXG6 1647 aa19.25■□□□□ 0.67
TMCO3-205ENST00000465556 GPATCH8Q9UKJ3 1502 aaKnown RBP19.24■□□□□ 0.67
TMCO3-205ENST00000465556 ABCA6Q8N139 1617 aa19.22■□□□□ 0.67
TMCO3-205ENST00000465556 SYCP2Q9BX26 1530 aa19.21■□□□□ 0.67
TMCO3-205ENST00000465556 ARHGEF12Q9NZN5 1544 aa19.21■□□□□ 0.67
TMCO3-205ENST00000465556 DIP2CQ9Y2E4 1556 aa19.21■□□□□ 0.67
TMCO3-205ENST00000465556 RIMS1Q86UR5 1692 aaKnown RBP19.2■□□□□ 0.66
TMCO3-205ENST00000465556 FER1L4A9Z1Z3 1794 aa19.2■□□□□ 0.66
TMCO3-205ENST00000465556 KIDINS220Q9ULH0 1771 aa19.19■□□□□ 0.66
TMCO3-205ENST00000465556 CCNB3Q8WWL7 1395 aa19.18■□□□□ 0.66
TMCO3-205ENST00000465556 C9orf84Q5VXU9 1444 aa19.17■□□□□ 0.66
TMCO3-205ENST00000465556 TRAPPC8Q9Y2L5 1435 aa19.17■□□□□ 0.66
TMCO3-205ENST00000465556 REREQ9P2R6 1566 aa19.17■□□□□ 0.66
TMCO3-205ENST00000465556 ATP10AO60312 1499 aa19.16■□□□□ 0.66
TMCO3-205ENST00000465556 MLH3Q9UHC1 1453 aa19.16■□□□□ 0.66
TMCO3-205ENST00000465556 ARID4BQ4LE39 1312 aaPredicted RBP19.15■□□□□ 0.66
TMCO3-205ENST00000465556 NCOA2Q15596 1464 aa19.15■□□□□ 0.66
TMCO3-205ENST00000465556 PLEKHH2Q8IVE3 1493 aa19.15■□□□□ 0.66
TMCO3-205ENST00000465556 MAP3K1Q13233 1512 aa19.15■□□□□ 0.66
TMCO3-205ENST00000465556 INO80Q9ULG1 1556 aaPredicted RBP19.14■□□□□ 0.65
TMCO3-205ENST00000465556 PTPRMP28827 1452 aa19.13■□□□□ 0.65
TMCO3-205ENST00000465556 LRRC9Q6ZRR7 1453 aa19.12■□□□□ 0.65
TMCO3-205ENST00000465556 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
TMCO3-205ENST00000465556 KIAA1107Q9UPP5 1409 aa19.1■□□□□ 0.65
TMCO3-205ENST00000465556 ATP7AQ04656 1500 aa19.1■□□□□ 0.65
TMCO3-205ENST00000465556 CFDP1Q9UEE9 299 aaPredicted RBP19.09■□□□□ 0.65
TMCO3-205ENST00000465556 ZNF777Q9ULD5 760 aaPredicted RBP19.09■□□□□ 0.65
TMCO3-205ENST00000465556 ADGBQ8N7X0 1667 aa19.06■□□□□ 0.64
TMCO3-205ENST00000465556 CAMSAP2Q08AD1 1489 aa19.06■□□□□ 0.64
TMCO3-205ENST00000465556 AGLP35573 1532 aa19.05■□□□□ 0.64
TMCO3-205ENST00000465556 PLXNC1O60486 1568 aa19.04■□□□□ 0.64
TMCO3-205ENST00000465556 MYT1LQ9UL68 1186 aa19.04■□□□□ 0.64
TMCO3-205ENST00000465556 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
TMCO3-205ENST00000465556 HNRNPMP52272 730 aaKnown RBP eCLIP19.01■□□□□ 0.631e-9■■■■■ 40
TMCO3-205ENST00000465556 ARHGEF5Q12774 1597 aa19.01■□□□□ 0.63
TMCO3-205ENST00000465556 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
TMCO3-205ENST00000465556 CCDC141Q6ZP82 1450 aa19■□□□□ 0.63
TMCO3-205ENST00000465556 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
TMCO3-205ENST00000465556 MLECQ14165 292 aa18.99■□□□□ 0.63
TMCO3-205ENST00000465556 C3P01024 1663 aa18.98■□□□□ 0.63
TMCO3-205ENST00000465556 KANK4Q5T7N3 995 aaPredicted RBP18.97■□□□□ 0.63
TMCO3-205ENST00000465556 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.63
TMCO3-205ENST00000465556 MROH2AA6NES4 1674 aa18.95■□□□□ 0.62
TMCO3-205ENST00000465556 PREX1Q8TCU6 1659 aa18.95■□□□□ 0.62
TMCO3-205ENST00000465556 A2MP01023 1474 aa18.95■□□□□ 0.62
TMCO3-205ENST00000465556 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
TMCO3-205ENST00000465556 RTEL1-TNFRSF6BF6WH68 1400 aa18.93■□□□□ 0.62
TMCO3-205ENST00000465556 CROCC2H7BZ55 1655 aa18.93■□□□□ 0.62
TMCO3-205ENST00000465556 MAST1Q9Y2H9 1570 aa18.92■□□□□ 0.62
TMCO3-205ENST00000465556 MIA2Q96PC5 1412 aa18.91■□□□□ 0.62
TMCO3-205ENST00000465556 PTPN23Q9H3S7 1636 aa18.91■□□□□ 0.62
TMCO3-205ENST00000465556 CLTCQ00610 1675 aaKnown RBP18.91■□□□□ 0.62
TMCO3-205ENST00000465556 SETD1BQ9UPS6 1966 aaKnown RBP18.9■□□□□ 0.62
TMCO3-205ENST00000465556 APLP2Q06481 763 aa18.9■□□□□ 0.62
TMCO3-205ENST00000465556 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
TMCO3-205ENST00000465556 CNTLNQ9NXG0 1405 aa18.87■□□□□ 0.61
TMCO3-205ENST00000465556 DNMT1P26358 1616 aaKnown RBP18.85■□□□□ 0.61
TMCO3-205ENST00000465556 FGD6Q6ZV73 1430 aa18.83■□□□□ 0.61
TMCO3-205ENST00000465556 RSPH4AQ5TD94 716 aa18.83■□□□□ 0.6
TMCO3-205ENST00000465556 EIF2AK4Q9P2K8 1649 aaKnown RBP18.82■□□□□ 0.6
TMCO3-205ENST00000465556 TCOF1Q13428 1488 aaKnown RBP18.82■□□□□ 0.6
TMCO3-205ENST00000465556 SHANK2Q9UPX8 1470 aa18.82■□□□□ 0.6
TMCO3-205ENST00000465556 RNF17Q9BXT8 1623 aaKnown RBP18.82■□□□□ 0.6
TMCO3-205ENST00000465556 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
TMCO3-205ENST00000465556 FAM135AQ9P2D6 1515 aa18.8■□□□□ 0.6
TMCO3-205ENST00000465556 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
TMCO3-205ENST00000465556 ESF1Q9H501 851 aaKnown RBP18.8■□□□□ 0.6
TMCO3-205ENST00000465556 ZNF142P52746 1687 aaPredicted RBP18.77■□□□□ 0.6
TMCO3-205ENST00000465556 KDM5DQ9BY66 1539 aa18.77■□□□□ 0.6
TMCO3-205ENST00000465556 MYO3AQ8NEV4 1616 aa18.77■□□□□ 0.6
TMCO3-205ENST00000465556 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
TMCO3-205ENST00000465556 UHRF1BP1Q6BDS2 1440 aa18.76■□□□□ 0.59
TMCO3-205ENST00000465556 TSPY4P0CV99 314 aa18.76■□□□□ 0.59
TMCO3-205ENST00000465556 TSPY10P0CW01 314 aa18.76■□□□□ 0.59
TMCO3-205ENST00000465556 ABCC5O15440 1437 aa18.74■□□□□ 0.59
TMCO3-205ENST00000465556 DAPK1P53355 1430 aa18.74■□□□□ 0.59
TMCO3-205ENST00000465556 NPATQ14207 1427 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms