RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 ZC3H15Q8WU90 426 aaKnown RBP16■□□□□ 0.15
COL4A2-203ENST00000462309 POTEGQ6S5H5 508 aa15.99■□□□□ 0.15
COL4A2-203ENST00000462309 GPHNQ9NQX3 736 aaPredicted RBP15.99■□□□□ 0.15
COL4A2-203ENST00000462309 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
COL4A2-203ENST00000462309 PCDH10Q9P2E7 1040 aa15.96■□□□□ 0.15
COL4A2-203ENST00000462309 OTUD5Q96G74 571 aa15.95■□□□□ 0.14
COL4A2-203ENST00000462309 PPP1R15BQ5SWA1 713 aa15.94■□□□□ 0.14
COL4A2-203ENST00000462309 SMYD5Q6GMV2 418 aa15.94■□□□□ 0.14
COL4A2-203ENST00000462309 PDCD7Q8N8D1 485 aaKnown RBP15.91■□□□□ 0.14
COL4A2-203ENST00000462309 MICALL2Q8IY33 904 aa15.9■□□□□ 0.14
COL4A2-203ENST00000462309 ATN1P54259 1190 aaPredicted RBP15.89■□□□□ 0.13
COL4A2-203ENST00000462309 TMEM132AQ24JP5 1023 aa15.89■□□□□ 0.13
COL4A2-203ENST00000462309 ATMINO43313 823 aaPredicted RBP15.86■□□□□ 0.13
COL4A2-203ENST00000462309 IRX5P78411 483 aaPredicted RBP15.86■□□□□ 0.13
COL4A2-203ENST00000462309 DSG2Q14126 1118 aa15.85■□□□□ 0.13
COL4A2-203ENST00000462309 ASTLQ6HA08 431 aaPredicted RBP15.85■□□□□ 0.13
COL4A2-203ENST00000462309 TMEM121BQ9BXQ6 578 aaPredicted RBP15.84■□□□□ 0.13
COL4A2-203ENST00000462309 ZMYND10O75800 440 aa15.83■□□□□ 0.12
COL4A2-203ENST00000462309 IER5LQ5T953 404 aa15.83■□□□□ 0.12
COL4A2-203ENST00000462309 OCEL1Q9H607 264 aa15.83■□□□□ 0.12
COL4A2-203ENST00000462309 EMILIN3Q9NT22 766 aa15.83■□□□□ 0.12
COL4A2-203ENST00000462309 FOXK1P85037 733 aa15.82■□□□□ 0.12
COL4A2-203ENST00000462309 BRPF1P55201 1214 aaPredicted RBP15.8■□□□□ 0.12
COL4A2-203ENST00000462309 SLC24A3Q9HC58 644 aa15.8■□□□□ 0.12
COL4A2-203ENST00000462309 MLLT3P42568 568 aaPredicted RBP15.79■□□□□ 0.12
COL4A2-203ENST00000462309 TMC2Q8TDI7 906 aa15.79■□□□□ 0.12
COL4A2-203ENST00000462309 GTF3C3Q9Y5Q9 886 aa15.79■□□□□ 0.12
COL4A2-203ENST00000462309 BOLA1Q9Y3E2 137 aa15.78■□□□□ 0.12
COL4A2-203ENST00000462309 SPDYE16A6NNV3 312 aaPredicted RBP15.77■□□□□ 0.12
COL4A2-203ENST00000462309 DPYSL4O14531 572 aa15.77■□□□□ 0.12
COL4A2-203ENST00000462309 KIF3CO14782 793 aa15.76■□□□□ 0.11
COL4A2-203ENST00000462309 BARGINQ6ZT62 677 aa15.75■□□□□ 0.11
COL4A2-203ENST00000462309 PDIA6Q15084 440 aa15.74■□□□□ 0.11
COL4A2-203ENST00000462309 RBM26Q5T8P6 1007 aaKnown RBP15.73■□□□□ 0.11
COL4A2-203ENST00000462309 C2orf72A6NCS6 295 aa15.72■□□□□ 0.11
COL4A2-203ENST00000462309 POTEB2H3BUK9 544 aa15.72■□□□□ 0.11
COL4A2-203ENST00000462309 PLPP6Q8IY26 295 aa15.72■□□□□ 0.11
COL4A2-203ENST00000462309 PLCG2P16885 1265 aa15.67■□□□□ 0.1
COL4A2-203ENST00000462309 G3V3G9 751 aa15.66■□□□□ 0.1
COL4A2-203ENST00000462309 GPIHBP1Q8IV16 184 aa15.66■□□□□ 0.1
COL4A2-203ENST00000462309 L3MBTL3Q96JM7 780 aaPredicted RBP15.66■□□□□ 0.1
COL4A2-203ENST00000462309 NEUROD2Q15784 382 aa15.65■□□□□ 0.1
COL4A2-203ENST00000462309 TIMELESSQ9UNS1 1208 aa15.63■□□□□ 0.09
COL4A2-203ENST00000462309 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
COL4A2-203ENST00000462309 TMEM92Q6UXU6 159 aa15.6■□□□□ 0.09
COL4A2-203ENST00000462309 AK7Q96M32 723 aa15.59■□□□□ 0.09
COL4A2-203ENST00000462309 MAP3K9P80192 1104 aa15.58■□□□□ 0.08
COL4A2-203ENST00000462309 COLQQ9Y215 455 aaPredicted RBP15.58■□□□□ 0.08
COL4A2-203ENST00000462309 ERICH6Q7L0X2 663 aa15.54■□□□□ 0.08
COL4A2-203ENST00000462309 OXER1Q8TDS5 423 aa15.54■□□□□ 0.08
COL4A2-203ENST00000462309 SEC24BO95487 1268 aa15.53■□□□□ 0.08
COL4A2-203ENST00000462309 KRI1Q8N9T8 703 aaKnown RBP15.53■□□□□ 0.08
COL4A2-203ENST00000462309 GPR37O15354 613 aa15.52■□□□□ 0.08
COL4A2-203ENST00000462309 POTEFA5A3E0 1075 aa15.51■□□□□ 0.07
COL4A2-203ENST00000462309 PTGER2P43116 358 aa15.5■□□□□ 0.07
COL4A2-203ENST00000462309 SLC39A7Q92504 469 aa15.5■□□□□ 0.07
COL4A2-203ENST00000462309 UPF1Q92900 1129 aaKnown RBP eCLIP15.49■□□□□ 0.07
COL4A2-203ENST00000462309 GRXCR2A6NFK2 248 aa15.48■□□□□ 0.07
COL4A2-203ENST00000462309 C7P10643 843 aa15.47■□□□□ 0.07
COL4A2-203ENST00000462309 OSBPP22059 807 aa15.47■□□□□ 0.07
COL4A2-203ENST00000462309 MAMSTRQ6ZN01 415 aa15.47■□□□□ 0.07
COL4A2-203ENST00000462309 FAM163AQ96GL9 167 aaPredicted RBP15.46■□□□□ 0.07
COL4A2-203ENST00000462309 TRIM66O15016 1216 aa15.45■□□□□ 0.06
COL4A2-203ENST00000462309 TBC1D12O60347 775 aa15.43■□□□□ 0.06
COL4A2-203ENST00000462309 GPBP1L1Q9HC44 474 aaPredicted RBP15.41■□□□□ 0.06
COL4A2-203ENST00000462309 PTCD2Q8WV60 388 aaKnown RBP15.4■□□□□ 0.06
COL4A2-203ENST00000462309 NUTM2FA1L443 756 aa15.39■□□□□ 0.05
COL4A2-203ENST00000462309 PDE4DQ08499 809 aa15.39■□□□□ 0.05
COL4A2-203ENST00000462309 MINK1Q8N4C8 1332 aaPredicted RBP15.39■□□□□ 0.05
COL4A2-203ENST00000462309 EVI5O60447 810 aa15.38■□□□□ 0.05
COL4A2-203ENST00000462309 DDX12PQ92771 950 aa15.38■□□□□ 0.05
COL4A2-203ENST00000462309 METRNQ9UJH8 293 aa15.38■□□□□ 0.05
COL4A2-203ENST00000462309 SLC34A2O95436 690 aa15.36■□□□□ 0.05
COL4A2-203ENST00000462309 LCE2DQ5TA82 110 aaPredicted RBP15.35■□□□□ 0.05
COL4A2-203ENST00000462309 KDM4CQ9H3R0 1056 aa15.35■□□□□ 0.05
COL4A2-203ENST00000462309 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
COL4A2-203ENST00000462309 DAXXQ9UER7 740 aaPredicted RBP15.35■□□□□ 0.05
COL4A2-203ENST00000462309 MAP2K5Q13163 448 aa15.34■□□□□ 0.05
COL4A2-203ENST00000462309 GNPATO15228 680 aa15.33■□□□□ 0.04
COL4A2-203ENST00000462309 PRIM1P49642 420 aaKnown RBP15.33■□□□□ 0.04
COL4A2-203ENST00000462309 C3orf67Q6ZVT6 689 aa15.33■□□□□ 0.04
COL4A2-203ENST00000462309 IRF6O14896 467 aa15.32■□□□□ 0.04
COL4A2-203ENST00000462309 HIC1Q14526 733 aa15.32■□□□□ 0.04
COL4A2-203ENST00000462309 FCHSD2O94868 740 aa15.31■□□□□ 0.04
COL4A2-203ENST00000462309 SCUBE2Q9NQ36 999 aa15.31■□□□□ 0.04
COL4A2-203ENST00000462309 C14orf37Q86TY3 774 aa15.3■□□□□ 0.04
COL4A2-203ENST00000462309 POTEJP0CG39 1038 aa15.28■□□□□ 0.04
COL4A2-203ENST00000462309 IL27Q8NEV9 243 aa15.28■□□□□ 0.04
COL4A2-203ENST00000462309 CCDC102AQ96A19 550 aa15.28■□□□□ 0.04
COL4A2-203ENST00000462309 FECHP22830 423 aa15.26■□□□□ 0.03
COL4A2-203ENST00000462309 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
COL4A2-203ENST00000462309 PTGDRQ13258 359 aa15.25■□□□□ 0.03
COL4A2-203ENST00000462309 AMHR2Q16671 573 aa15.25■□□□□ 0.03
COL4A2-203ENST00000462309 PHF14O94880 888 aa15.21■□□□□ 0.03
COL4A2-203ENST00000462309 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
COL4A2-203ENST00000462309 EPAS1Q99814 870 aa15.2■□□□□ 0.02
COL4A2-203ENST00000462309 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.2■□□□□ 0.02
COL4A2-203ENST00000462309 FAM117AQ9C073 453 aa15.18■□□□□ 0.02
COL4A2-203ENST00000462309 EN1Q05925 392 aaPredicted RBP15.17■□□□□ 0.02
COL4A2-203ENST00000462309 NPDC1Q9NQX5 325 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms