RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 CDK11AQ9UQ88 783 aaPredicted RBP15.79■□□□□ 0.12
CD40-203ENST00000461171 ADAMTSL3P82987 1691 aa15.79■□□□□ 0.12
CD40-203ENST00000461171 FYCO1Q9BQS8 1478 aa15.78■□□□□ 0.12
CD40-203ENST00000461171 POGZQ7Z3K3 1410 aa15.77■□□□□ 0.12
CD40-203ENST00000461171 BCORL1Q5H9F3 1711 aa15.75■□□□□ 0.11
CD40-203ENST00000461171 MAGI2Q86UL8 1455 aa15.75■□□□□ 0.11
CD40-203ENST00000461171 SCAPERQ9BY12 1400 aa15.75■□□□□ 0.11
CD40-203ENST00000461171 ZFYVE16Q7Z3T8 1539 aa15.74■□□□□ 0.11
CD40-203ENST00000461171 YEATS2Q9ULM3 1422 aa15.74■□□□□ 0.11
CD40-203ENST00000461171 PIAS4Q8N2W9 510 aaPredicted RBP15.73■□□□□ 0.11
CD40-203ENST00000461171 HECW2Q9P2P5 1572 aa15.73■□□□□ 0.11
CD40-203ENST00000461171 SIGLEC1Q9BZZ2 1709 aa15.72■□□□□ 0.11
CD40-203ENST00000461171 EFCAB2Q5VUJ9 269 aa15.72■□□□□ 0.11
CD40-203ENST00000461171 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
CD40-203ENST00000461171 PREX2Q70Z35 1606 aa15.72■□□□□ 0.11
CD40-203ENST00000461171 MADDQ8WXG6 1647 aa15.71■□□□□ 0.11
CD40-203ENST00000461171 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.1
CD40-203ENST00000461171 PTPRMP28827 1452 aa15.71■□□□□ 0.1
CD40-203ENST00000461171 KDM5CP41229 1560 aa15.7■□□□□ 0.1
CD40-203ENST00000461171 ZNF518AQ6AHZ1 1483 aa15.68■□□□□ 0.1
CD40-203ENST00000461171 ABCC1P33527 1531 aa15.67■□□□□ 0.1
CD40-203ENST00000461171 CDC42BPAQ5VT25 1732 aa15.66■□□□□ 0.1
CD40-203ENST00000461171 ARID4BQ4LE39 1312 aaPredicted RBP15.66■□□□□ 0.1
CD40-203ENST00000461171 CEP162Q5TB80 1403 aa15.65■□□□□ 0.1
CD40-203ENST00000461171 ARHGEF12Q9NZN5 1544 aa15.64■□□□□ 0.09
CD40-203ENST00000461171 ATP10AO60312 1499 aa15.64■□□□□ 0.09
CD40-203ENST00000461171 C9orf84Q5VXU9 1444 aa15.63■□□□□ 0.09
CD40-203ENST00000461171 RIMS1Q86UR5 1692 aaKnown RBP15.63■□□□□ 0.09
CD40-203ENST00000461171 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
CD40-203ENST00000461171 MLH3Q9UHC1 1453 aa15.62■□□□□ 0.09
CD40-203ENST00000461171 GPATCH8Q9UKJ3 1502 aaKnown RBP15.62■□□□□ 0.09
CD40-203ENST00000461171 REREQ9P2R6 1566 aa15.62■□□□□ 0.09
CD40-203ENST00000461171 DIP2CQ9Y2E4 1556 aa15.62■□□□□ 0.09
CD40-203ENST00000461171 TRAPPC8Q9Y2L5 1435 aa15.61■□□□□ 0.09
CD40-203ENST00000461171 AFAP1Q8N556 730 aa15.61■□□□□ 0.09
CD40-203ENST00000461171 SAMD9LQ8IVG5 1584 aa15.6■□□□□ 0.09
CD40-203ENST00000461171 ABCA6Q8N139 1617 aa15.6■□□□□ 0.09
CD40-203ENST00000461171 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.08
CD40-203ENST00000461171 FER1L4A9Z1Z3 1794 aa15.57■□□□□ 0.08
CD40-203ENST00000461171 LMTK3Q96Q04 1460 aa15.57■□□□□ 0.08
CD40-203ENST00000461171 MTUS2Q5JR59 1369 aa15.56■□□□□ 0.08
CD40-203ENST00000461171 SYCP2Q9BX26 1530 aa15.56■□□□□ 0.08
CD40-203ENST00000461171 KIDINS220Q9ULH0 1771 aa15.56■□□□□ 0.08
CD40-203ENST00000461171 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
CD40-203ENST00000461171 AGLP35573 1532 aa15.54■□□□□ 0.08
CD40-203ENST00000461171 KIAA1107Q9UPP5 1409 aa15.54■□□□□ 0.08
CD40-203ENST00000461171 CCNB3Q8WWL7 1395 aa15.53■□□□□ 0.08
CD40-203ENST00000461171 PLEKHH2Q8IVE3 1493 aa15.52■□□□□ 0.08
CD40-203ENST00000461171 MLECQ14165 292 aa15.52■□□□□ 0.08
CD40-203ENST00000461171 INO80Q9ULG1 1556 aaPredicted RBP15.51■□□□□ 0.07
CD40-203ENST00000461171 VPS8Q8N3P4 1428 aa15.5■□□□□ 0.07
CD40-203ENST00000461171 CFDP1Q9UEE9 299 aaPredicted RBP15.49■□□□□ 0.07
CD40-203ENST00000461171 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
CD40-203ENST00000461171 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
CD40-203ENST00000461171 LOC105371045A0A1W2PR82 267 aa15.48■□□□□ 0.07
CD40-203ENST00000461171 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
CD40-203ENST00000461171 MBD5Q9P267 1494 aa15.46■□□□□ 0.07
CD40-203ENST00000461171 PLXNC1O60486 1568 aa15.46■□□□□ 0.07
CD40-203ENST00000461171 HNRNPMP52272 730 aaKnown RBP eCLIP15.46■□□□□ 0.07
CD40-203ENST00000461171 MYT1LQ9UL68 1186 aa15.46■□□□□ 0.07
CD40-203ENST00000461171 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.06
CD40-203ENST00000461171 SPAG9O60271 1321 aaKnown RBP15.44■□□□□ 0.06
CD40-203ENST00000461171 ZNF644Q9H582 1327 aaPredicted RBP15.43■□□□□ 0.06
CD40-203ENST00000461171 PREX1Q8TCU6 1659 aa15.43■□□□□ 0.06
CD40-203ENST00000461171 MAP3K1Q13233 1512 aa15.43■□□□□ 0.06
CD40-203ENST00000461171 LRRC9Q6ZRR7 1453 aa15.42■□□□□ 0.06
CD40-203ENST00000461171 C3P01024 1663 aa15.41■□□□□ 0.06
CD40-203ENST00000461171 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
CD40-203ENST00000461171 A2MP01023 1474 aa15.4■□□□□ 0.06
CD40-203ENST00000461171 CAMSAP2Q08AD1 1489 aa15.4■□□□□ 0.06
CD40-203ENST00000461171 CEBPAP49715 358 aaPredicted RBP15.4■□□□□ 0.06
CD40-203ENST00000461171 HSPA2P54652 639 aa15.4■□□□□ 0.06
CD40-203ENST00000461171 CNTLNQ9NXG0 1405 aa15.4■□□□□ 0.06
CD40-203ENST00000461171 ADGBQ8N7X0 1667 aa15.39■□□□□ 0.05
CD40-203ENST00000461171 RTEL1-TNFRSF6BF6WH68 1400 aa15.39■□□□□ 0.05
CD40-203ENST00000461171 CCDC141Q6ZP82 1450 aa15.39■□□□□ 0.05
CD40-203ENST00000461171 MROH2AA6NES4 1674 aa15.38■□□□□ 0.05
CD40-203ENST00000461171 ILDR1Q86SU0 546 aaPredicted RBP15.38■□□□□ 0.05
CD40-203ENST00000461171 SETD1BQ9UPS6 1966 aaKnown RBP15.37■□□□□ 0.05
CD40-203ENST00000461171 ARHGEF5Q12774 1597 aa15.36■□□□□ 0.05
CD40-203ENST00000461171 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
CD40-203ENST00000461171 UHRF1BP1Q6BDS2 1440 aa15.35■□□□□ 0.05
CD40-203ENST00000461171 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
CD40-203ENST00000461171 NPATQ14207 1427 aa15.34■□□□□ 0.05
CD40-203ENST00000461171 ESF1Q9H501 851 aaKnown RBP15.32■□□□□ 0.04
CD40-203ENST00000461171 CLTCQ00610 1675 aaKnown RBP15.32■□□□□ 0.04
CD40-203ENST00000461171 RSPH4AQ5TD94 716 aa15.31■□□□□ 0.04
CD40-203ENST00000461171 DHX29Q7Z478 1369 aaKnown RBP15.31■□□□□ 0.04
CD40-203ENST00000461171 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
CD40-203ENST00000461171 ZMYM3Q14202 1370 aa15.3■□□□□ 0.04
CD40-203ENST00000461171 STRCQ7RTU9 1775 aa15.3■□□□□ 0.04
CD40-203ENST00000461171 MIA2Q96PC5 1412 aa15.3■□□□□ 0.04
CD40-203ENST00000461171 MAST1Q9Y2H9 1570 aa15.29■□□□□ 0.04
CD40-203ENST00000461171 FAM135AQ9P2D6 1515 aa15.28■□□□□ 0.04
CD40-203ENST00000461171 PTPRKQ15262 1439 aa15.27■□□□□ 0.04
CD40-203ENST00000461171 ADRA2BP18089 450 aa15.26■□□□□ 0.03
CD40-203ENST00000461171 ZNF142P52746 1687 aaPredicted RBP15.25■□□□□ 0.03
CD40-203ENST00000461171 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
CD40-203ENST00000461171 GGT6Q6P531 493 aa15.25■□□□□ 0.03
CD40-203ENST00000461171 KDM5DQ9BY66 1539 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms