RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 BOLA1Q9Y3E2 137 aa6.95□□□□□ -1.3
HPS3-203ENST00000460822 RNF166Q96A37 237 aaPredicted RBP6.94□□□□□ -1.3
HPS3-203ENST00000460822 DOK7Q18PE1 504 aa6.93□□□□□ -1.3
HPS3-203ENST00000460822 ZNF710Q8N1W2 664 aa6.93□□□□□ -1.3
HPS3-203ENST00000460822 ERBB3P21860 1342 aa6.93□□□□□ -1.3
HPS3-203ENST00000460822 DCAF8L2P0C7V8 631 aa6.91□□□□□ -1.3
HPS3-203ENST00000460822 NLRP6P59044 892 aa6.91□□□□□ -1.3
HPS3-203ENST00000460822 MYT1LQ9UL68 1186 aa6.89□□□□□ -1.31
HPS3-203ENST00000460822 PHF8Q9UPP1 1060 aa6.89□□□□□ -1.31
HPS3-203ENST00000460822 RIMBP2O15034 1052 aa6.88□□□□□ -1.31
HPS3-203ENST00000460822 CHGAP10645 457 aaKnown RBP6.88□□□□□ -1.31
HPS3-203ENST00000460822 ZNF687Q8N1G0 1237 aa6.88□□□□□ -1.31
HPS3-203ENST00000460822 PTGER2P43116 358 aa6.88□□□□□ -1.31
HPS3-203ENST00000460822 ZSWIM6Q9HCJ5 1215 aa6.88□□□□□ -1.31
HPS3-203ENST00000460822 VARS2Q5ST30 1063 aaKnown RBP6.86□□□□□ -1.31
HPS3-203ENST00000460822 HS6ST3Q8IZP7 471 aa6.86□□□□□ -1.31
HPS3-203ENST00000460822 GPR153Q6NV75 609 aa6.82□□□□□ -1.32
HPS3-203ENST00000460822 MFRPQ9BY79 579 aa6.82□□□□□ -1.32
HPS3-203ENST00000460822 MS4A4AQ96JQ5 239 aa6.82□□□□□ -1.32
HPS3-203ENST00000460822 MICALL2Q8IY33 904 aa6.81□□□□□ -1.32
HPS3-203ENST00000460822 FBXO22Q8NEZ5 403 aa6.81□□□□□ -1.32
HPS3-203ENST00000460822 RYDENQ9NUL5 291 aaKnown RBP6.8□□□□□ -1.32
HPS3-203ENST00000460822 TMEM92Q6UXU6 159 aa6.78□□□□□ -1.32
HPS3-203ENST00000460822 DNAJC5Q9H3Z4 198 aa6.75□□□□□ -1.33
HPS3-203ENST00000460822 ZNF316A6NFI3 1004 aaPredicted RBP6.74□□□□□ -1.33
HPS3-203ENST00000460822 ANKRD13DQ6ZTN6 518 aa6.74□□□□□ -1.33
HPS3-203ENST00000460822 ARSIQ5FYB1 569 aa6.73□□□□□ -1.33
HPS3-203ENST00000460822 PPP1R37O75864 691 aa6.71□□□□□ -1.33
HPS3-203ENST00000460822 LSM11P83369 360 aaKnown RBP eCLIP6.71□□□□□ -1.33
HPS3-203ENST00000460822 TMC2Q8TDI7 906 aa6.71□□□□□ -1.33
HPS3-203ENST00000460822 NKX1-1Q15270 411 aaPredicted RBP6.71□□□□□ -1.34
HPS3-203ENST00000460822 PLCB2Q00722 1185 aa6.69□□□□□ -1.34
HPS3-203ENST00000460822 PBX2P40425 430 aa6.69□□□□□ -1.34
HPS3-203ENST00000460822 BBXQ8WY36 941 aaPredicted RBP6.68□□□□□ -1.34
HPS3-203ENST00000460822 PLA2G2EQ9NZK7 142 aa6.68□□□□□ -1.34
HPS3-203ENST00000460822 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.68□□□□□ -1.34
HPS3-203ENST00000460822 C2orf72A6NCS6 295 aa6.67□□□□□ -1.34
HPS3-203ENST00000460822 HCSTQ9UBK5 93 aa6.67□□□□□ -1.34
HPS3-203ENST00000460822 KHSRPQ92945 711 aaKnown RBP eCLIP6.66□□□□□ -1.34
HPS3-203ENST00000460822 GTPBP6O43824 516 aaPredicted RBP6.66□□□□□ -1.34
HPS3-203ENST00000460822 KIF3CO14782 793 aa6.62□□□□□ -1.35
HPS3-203ENST00000460822 POTEEQ6S8J3 1075 aa6.62□□□□□ -1.35
HPS3-203ENST00000460822 SPRYD3Q8NCJ5 442 aa6.62□□□□□ -1.35
HPS3-203ENST00000460822 PDE4AP27815 886 aa6.61□□□□□ -1.35
HPS3-203ENST00000460822 GPHNQ9NQX3 736 aaPredicted RBP6.61□□□□□ -1.35
HPS3-203ENST00000460822 SLC34A2O95436 690 aa6.6□□□□□ -1.35
HPS3-203ENST00000460822 HAP1P54257 671 aaPredicted RBP6.6□□□□□ -1.35
HPS3-203ENST00000460822 FOXK1P85037 733 aa6.59□□□□□ -1.35
HPS3-203ENST00000460822 PLPP6Q8IY26 295 aa6.59□□□□□ -1.35
HPS3-203ENST00000460822 CFAP44Q96MT7 982 aa6.59□□□□□ -1.35
HPS3-203ENST00000460822 LHX6Q9UPM6 363 aa6.59□□□□□ -1.35
HPS3-203ENST00000460822 NUDT7P0C024 238 aa6.58□□□□□ -1.36
HPS3-203ENST00000460822 PAXIP1Q6ZW49 1069 aaPredicted RBP6.58□□□□□ -1.36
HPS3-203ENST00000460822 AXIN2Q9Y2T1 843 aa6.58□□□□□ -1.36
HPS3-203ENST00000460822 ARHGAP33O14559 1287 aa6.57□□□□□ -1.36
HPS3-203ENST00000460822 TBC1D12O60347 775 aa6.57□□□□□ -1.36
HPS3-203ENST00000460822 PCDHGA4Q9Y5G9 962 aa6.57□□□□□ -1.36
HPS3-203ENST00000460822 TK2O00142 265 aa6.57□□□□□ -1.36
HPS3-203ENST00000460822 DSG2Q14126 1118 aa6.57□□□□□ -1.36
HPS3-203ENST00000460822 ADGRD1Q6QNK2 874 aa6.57□□□□□ -1.36
HPS3-203ENST00000460822 LARP6Q9BRS8 491 aaKnown RBP6.56□□□□□ -1.36
HPS3-203ENST00000460822 PSDA5PKW4 1024 aaPredicted RBP6.55□□□□□ -1.36
HPS3-203ENST00000460822 PPP1R15BQ5SWA1 713 aa6.55□□□□□ -1.36
HPS3-203ENST00000460822 CRISPLD2Q9H0B8 497 aa6.55□□□□□ -1.36
HPS3-203ENST00000460822 RGS20O76081 388 aa6.55□□□□□ -1.36
HPS3-203ENST00000460822 HRO43593 1189 aa6.54□□□□□ -1.36
HPS3-203ENST00000460822 DDX27Q96GQ7 796 aaKnown RBP6.54□□□□□ -1.36
HPS3-203ENST00000460822 NCKAP5LQ9HCH0 1330 aa6.53□□□□□ -1.36
HPS3-203ENST00000460822 PTCD2Q8WV60 388 aaKnown RBP6.52□□□□□ -1.37
HPS3-203ENST00000460822 KDM4FA0A1W2PPD8 638 aa6.51□□□□□ -1.37
HPS3-203ENST00000460822 IFFO2Q5TF58 517 aa6.51□□□□□ -1.37
HPS3-203ENST00000460822 UPF1Q92900 1129 aaKnown RBP eCLIP6.51□□□□□ -1.37
HPS3-203ENST00000460822 CADPS2Q86UW7 1296 aa6.5□□□□□ -1.37
HPS3-203ENST00000460822 BCANQ96GW7 911 aa6.5□□□□□ -1.37
HPS3-203ENST00000460822 MFSD10Q14728 455 aa6.49□□□□□ -1.37
HPS3-203ENST00000460822 WDR70Q9NW82 654 aa6.48□□□□□ -1.37
HPS3-203ENST00000460822 MAP3K9P80192 1104 aa6.48□□□□□ -1.37
HPS3-203ENST00000460822 DMRTA1Q5VZB9 504 aa6.48□□□□□ -1.37
HPS3-203ENST00000460822 VSIG10Q8N0Z9 540 aa6.48□□□□□ -1.37
HPS3-203ENST00000460822 OXER1Q8TDS5 423 aa6.48□□□□□ -1.37
HPS3-203ENST00000460822 KCTD12Q96CX2 325 aaKnown RBP6.46□□□□□ -1.37
HPS3-203ENST00000460822 STAC3Q96MF2 364 aa6.46□□□□□ -1.38
HPS3-203ENST00000460822 PRKCSHP14314 528 aaPredicted RBP6.45□□□□□ -1.38
HPS3-203ENST00000460822 PSEN2P49810 448 aa6.45□□□□□ -1.38
HPS3-203ENST00000460822 PPP4R3BQ5MIZ7 849 aa6.44□□□□□ -1.38
HPS3-203ENST00000460822 IRX2Q9BZI1 471 aaPredicted RBP6.44□□□□□ -1.38
HPS3-203ENST00000460822 EVI5O60447 810 aa6.43□□□□□ -1.38
HPS3-203ENST00000460822 KCNH8Q96L42 1107 aa6.43□□□□□ -1.38
HPS3-203ENST00000460822 KDM2AQ9Y2K7 1162 aa6.41□□□□□ -1.38
HPS3-203ENST00000460822 ZNF454Q8N9F8 522 aa6.4□□□□□ -1.38
HPS3-203ENST00000460822 SLC4A5Q9BY07 1137 aa6.4□□□□□ -1.38
HPS3-203ENST00000460822 EMILIN3Q9NT22 766 aa6.4□□□□□ -1.38
HPS3-203ENST00000460822 A0A0G2JS52 829 aa6.4□□□□□ -1.39
HPS3-203ENST00000460822 VPS9D1Q9Y2B5 631 aa6.4□□□□□ -1.39
HPS3-203ENST00000460822 CAMK2BQ13554 666 aa6.39□□□□□ -1.39
HPS3-203ENST00000460822 E2F4Q16254 413 aa6.39□□□□□ -1.39
HPS3-203ENST00000460822 PTPN5P54829 565 aa6.38□□□□□ -1.39
HPS3-203ENST00000460822 TSHZ2Q9NRE2 1034 aa6.38□□□□□ -1.39
HPS3-203ENST00000460822 DPYSL4O14531 572 aa6.38□□□□□ -1.39
HPS3-203ENST00000460822 ANO8Q9HCE9 1232 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms