RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 MICALL2Q8IY33 904 aa10.27□□□□□ -0.77
SSX2IP-204ENST00000459708 TMEM92Q6UXU6 159 aa10.25□□□□□ -0.77
SSX2IP-204ENST00000459708 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
SSX2IP-204ENST00000459708 TAOK2Q9UL54 1235 aa10.24□□□□□ -0.77
SSX2IP-204ENST00000459708 STK25O00506 426 aa10.23□□□□□ -0.77
SSX2IP-204ENST00000459708 BCL11BQ9C0K0 894 aaPredicted RBP10.23□□□□□ -0.77
SSX2IP-204ENST00000459708 MS4A4AQ96JQ5 239 aa10.22□□□□□ -0.77
SSX2IP-204ENST00000459708 CHGAP10645 457 aaKnown RBP10.21□□□□□ -0.77
SSX2IP-204ENST00000459708 HS6ST3Q8IZP7 471 aa10.21□□□□□ -0.77
SSX2IP-204ENST00000459708 SOX12O15370 315 aa10.2□□□□□ -0.78
SSX2IP-204ENST00000459708 PHF8Q9UPP1 1060 aa10.2□□□□□ -0.78
SSX2IP-204ENST00000459708 STK24Q9Y6E0 443 aa10.2□□□□□ -0.78
SSX2IP-204ENST00000459708 RNF166Q96A37 237 aaPredicted RBP10.18□□□□□ -0.78
SSX2IP-204ENST00000459708 ZSWIM6Q9HCJ5 1215 aa10.18□□□□□ -0.78
SSX2IP-204ENST00000459708 GPR153Q6NV75 609 aa10.14□□□□□ -0.79
SSX2IP-204ENST00000459708 ZNF687Q8N1G0 1237 aa10.13□□□□□ -0.79
SSX2IP-204ENST00000459708 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
SSX2IP-204ENST00000459708 ARSIQ5FYB1 569 aa10.1□□□□□ -0.79
SSX2IP-204ENST00000459708 NLRP6P59044 892 aa10.09□□□□□ -0.79
SSX2IP-204ENST00000459708 NKX1-1Q15270 411 aaPredicted RBP10.09□□□□□ -0.79
SSX2IP-204ENST00000459708 DNAJC5Q9H3Z4 198 aa10.08□□□□□ -0.8
SSX2IP-204ENST00000459708 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.8
SSX2IP-204ENST00000459708 FBXO22Q8NEZ5 403 aa10.06□□□□□ -0.8
SSX2IP-204ENST00000459708 MFRPQ9BY79 579 aa10.06□□□□□ -0.8
SSX2IP-204ENST00000459708 ZNF316A6NFI3 1004 aaPredicted RBP10.04□□□□□ -0.8
SSX2IP-204ENST00000459708 PTGER2P43116 358 aa10.02□□□□□ -0.81
SSX2IP-204ENST00000459708 ANKRD13DQ6ZTN6 518 aa10.02□□□□□ -0.81
SSX2IP-204ENST00000459708 BBXQ8WY36 941 aaPredicted RBP10.02□□□□□ -0.81
SSX2IP-204ENST00000459708 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
SSX2IP-204ENST00000459708 LSM11P83369 360 aaKnown RBP eCLIP9.98□□□□□ -0.81
SSX2IP-204ENST00000459708 KIF3CO14782 793 aa9.97□□□□□ -0.81
SSX2IP-204ENST00000459708 NUDT7P0C024 238 aa9.97□□□□□ -0.81
SSX2IP-204ENST00000459708 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
SSX2IP-204ENST00000459708 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.94□□□□□ -0.82
SSX2IP-204ENST00000459708 PPP1R37O75864 691 aa9.92□□□□□ -0.82
SSX2IP-204ENST00000459708 PBX2P40425 430 aa9.92□□□□□ -0.82
SSX2IP-204ENST00000459708 LHX6Q9UPM6 363 aa9.92□□□□□ -0.82
SSX2IP-204ENST00000459708 PCDHGA4Q9Y5G9 962 aa9.91□□□□□ -0.82
SSX2IP-204ENST00000459708 PAXIP1Q6ZW49 1069 aaPredicted RBP9.9□□□□□ -0.82
SSX2IP-204ENST00000459708 TMC2Q8TDI7 906 aa9.9□□□□□ -0.82
SSX2IP-204ENST00000459708 RYDENQ9NUL5 291 aaKnown RBP9.9□□□□□ -0.82
SSX2IP-204ENST00000459708 AXIN2Q9Y2T1 843 aa9.9□□□□□ -0.82
SSX2IP-204ENST00000459708 POTEEQ6S8J3 1075 aa9.89□□□□□ -0.83
SSX2IP-204ENST00000459708 CFAP44Q96MT7 982 aa9.89□□□□□ -0.83
SSX2IP-204ENST00000459708 SPRYD3Q8NCJ5 442 aa9.88□□□□□ -0.83
SSX2IP-204ENST00000459708 SLC34A2O95436 690 aa9.87□□□□□ -0.83
SSX2IP-204ENST00000459708 PLCB2Q00722 1185 aa9.84□□□□□ -0.83
SSX2IP-204ENST00000459708 ADGRD1Q6QNK2 874 aa9.8□□□□□ -0.84
SSX2IP-204ENST00000459708 ARHGAP33O14559 1287 aa9.79□□□□□ -0.84
SSX2IP-204ENST00000459708 PLA2G2EQ9NZK7 142 aa9.78□□□□□ -0.84
SSX2IP-204ENST00000459708 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
SSX2IP-204ENST00000459708 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.85
SSX2IP-204ENST00000459708 HCSTQ9UBK5 93 aa9.77□□□□□ -0.85
SSX2IP-204ENST00000459708 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
SSX2IP-204ENST00000459708 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
SSX2IP-204ENST00000459708 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
SSX2IP-204ENST00000459708 KDM4FA0A1W2PPD8 638 aa9.73□□□□□ -0.85
SSX2IP-204ENST00000459708 PSEN2P49810 448 aa9.73□□□□□ -0.85
SSX2IP-204ENST00000459708 PLPP6Q8IY26 295 aa9.73□□□□□ -0.85
SSX2IP-204ENST00000459708 TK2O00142 265 aa9.71□□□□□ -0.86
SSX2IP-204ENST00000459708 FOXK1P85037 733 aa9.71□□□□□ -0.86
SSX2IP-204ENST00000459708 PPP4R3BQ5MIZ7 849 aa9.7□□□□□ -0.86
SSX2IP-204ENST00000459708 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
SSX2IP-204ENST00000459708 HRO43593 1189 aa9.69□□□□□ -0.86
SSX2IP-204ENST00000459708 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
SSX2IP-204ENST00000459708 CRISPLD2Q9H0B8 497 aa9.69□□□□□ -0.86
SSX2IP-204ENST00000459708 DSG2Q14126 1118 aa9.68□□□□□ -0.86
SSX2IP-204ENST00000459708 GPHNQ9NQX3 736 aaPredicted RBP9.68□□□□□ -0.86
SSX2IP-204ENST00000459708 KCTD12Q96CX2 325 aaKnown RBP9.67□□□□□ -0.86
SSX2IP-204ENST00000459708 KCNK17Q96T54 332 aa9.66□□□□□ -0.86
SSX2IP-204ENST00000459708 TBC1D12O60347 775 aa9.65□□□□□ -0.86
SSX2IP-204ENST00000459708 KCNH8Q96L42 1107 aa9.64□□□□□ -0.87
SSX2IP-204ENST00000459708 STAC3Q96MF2 364 aa9.64□□□□□ -0.87
SSX2IP-204ENST00000459708 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
SSX2IP-204ENST00000459708 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.87
SSX2IP-204ENST00000459708 MFSD10Q14728 455 aa9.6□□□□□ -0.87
SSX2IP-204ENST00000459708 PDE4AP27815 886 aa9.59□□□□□ -0.87
SSX2IP-204ENST00000459708 PPP1R15BQ5SWA1 713 aa9.59□□□□□ -0.87
SSX2IP-204ENST00000459708 ZNF454Q8N9F8 522 aa9.59□□□□□ -0.87
SSX2IP-204ENST00000459708 DDX27Q96GQ7 796 aaKnown RBP9.59□□□□□ -0.87
SSX2IP-204ENST00000459708 OXER1Q8TDS5 423 aa9.58□□□□□ -0.88
SSX2IP-204ENST00000459708 VPS9D1Q9Y2B5 631 aa9.58□□□□□ -0.88
SSX2IP-204ENST00000459708 PTPN5P54829 565 aa9.56□□□□□ -0.88
SSX2IP-204ENST00000459708 KDM2AQ9Y2K7 1162 aa9.55□□□□□ -0.88
SSX2IP-204ENST00000459708 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
SSX2IP-204ENST00000459708 SLC24A1O60721 1099 aa9.51□□□□□ -0.89
SSX2IP-204ENST00000459708 PTPREP23469 700 aa9.5□□□□□ -0.89
SSX2IP-204ENST00000459708 FOSBP53539 338 aa9.5□□□□□ -0.89
SSX2IP-204ENST00000459708 SLC4A5Q9BY07 1137 aa9.5□□□□□ -0.89
SSX2IP-204ENST00000459708 WDR70Q9NW82 654 aa9.5□□□□□ -0.89
SSX2IP-204ENST00000459708 THSD4Q6ZMP0 1018 aa9.49□□□□□ -0.89
SSX2IP-204ENST00000459708 VSIG10Q8N0Z9 540 aa9.49□□□□□ -0.89
SSX2IP-204ENST00000459708 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
SSX2IP-204ENST00000459708 ZBED2Q9BTP6 218 aa9.48□□□□□ -0.89
SSX2IP-204ENST00000459708 EMILIN3Q9NT22 766 aa9.48□□□□□ -0.89
SSX2IP-204ENST00000459708 GOLGA8CPA6NN73 597 aa9.47□□□□□ -0.89
SSX2IP-204ENST00000459708 BHMG1C9JSJ3 638 aaPredicted RBP9.47□□□□□ -0.89
SSX2IP-204ENST00000459708 JPH4Q96JJ6 628 aa9.47□□□□□ -0.89
SSX2IP-204ENST00000459708 MRPL50Q8N5N7 158 aaKnown RBP9.46□□□□□ -0.9
SSX2IP-204ENST00000459708 WNT2BQ93097 391 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms