RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 C3orf67Q6ZVT6 689 aa8.58□□□□□ -1.04
SPARCL1-204ENST00000458304 HS6ST3Q8IZP7 471 aa8.58□□□□□ -1.04
SPARCL1-204ENST00000458304 NLRP6P59044 892 aa8.57□□□□□ -1.04
SPARCL1-204ENST00000458304 TMEM132AQ24JP5 1023 aa8.57□□□□□ -1.04
SPARCL1-204ENST00000458304 MICALL2Q8IY33 904 aa8.55□□□□□ -1.04
SPARCL1-204ENST00000458304 G3V3G9 751 aa8.53□□□□□ -1.04
SPARCL1-204ENST00000458304 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
SPARCL1-204ENST00000458304 DNAJC5Q9H3Z4 198 aa8.53□□□□□ -1.04
SPARCL1-204ENST00000458304 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.53□□□□□ -1.04
SPARCL1-204ENST00000458304 C14orf37Q86TY3 774 aa8.52□□□□□ -1.05
SPARCL1-204ENST00000458304 CHGAP10645 457 aaKnown RBP8.51□□□□□ -1.05
SPARCL1-204ENST00000458304 TMEM92Q6UXU6 159 aa8.51□□□□□ -1.05
SPARCL1-204ENST00000458304 POTEMA6NI47 508 aa8.49□□□□□ -1.05
SPARCL1-204ENST00000458304 NKX1-1Q15270 411 aaPredicted RBP8.49□□□□□ -1.05
SPARCL1-204ENST00000458304 ST18O60284 1047 aa8.48□□□□□ -1.05
SPARCL1-204ENST00000458304 PODXL2Q9NZ53 605 aa8.48□□□□□ -1.05
SPARCL1-204ENST00000458304 PPP1R37O75864 691 aa8.47□□□□□ -1.05
SPARCL1-204ENST00000458304 POTEGQ6S5H5 508 aa8.47□□□□□ -1.05
SPARCL1-204ENST00000458304 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
SPARCL1-204ENST00000458304 SNPHO15079 494 aa8.46□□□□□ -1.06
SPARCL1-204ENST00000458304 NBR1Q14596 966 aa8.46□□□□□ -1.06
SPARCL1-204ENST00000458304 PAXIP1Q6ZW49 1069 aaPredicted RBP8.45□□□□□ -1.06
SPARCL1-204ENST00000458304 CCDC180Q9P1Z9 1646 aa8.44□□□□□ -1.06
SPARCL1-204ENST00000458304 HOXB3P14651 431 aaPredicted RBP8.44□□□□□ -1.06
SPARCL1-204ENST00000458304 KIF3CO14782 793 aa8.41□□□□□ -1.06
SPARCL1-204ENST00000458304 CFAP44Q96MT7 982 aa8.41□□□□□ -1.06
SPARCL1-204ENST00000458304 GTPBP6O43824 516 aaPredicted RBP8.37□□□□□ -1.07
SPARCL1-204ENST00000458304 C2orf72A6NCS6 295 aa8.36□□□□□ -1.07
SPARCL1-204ENST00000458304 DOK7Q18PE1 504 aa8.35□□□□□ -1.07
SPARCL1-204ENST00000458304 TSHZ2Q9NRE2 1034 aa8.35□□□□□ -1.07
SPARCL1-204ENST00000458304 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-204ENST00000458304 MARVELD3Q96A59 401 aa8.34□□□□□ -1.07
SPARCL1-204ENST00000458304 HOXB1P14653 301 aaPredicted RBP8.33□□□□□ -1.08
SPARCL1-204ENST00000458304 PCDH10Q9P2E7 1040 aa8.33□□□□□ -1.08
SPARCL1-204ENST00000458304 ZNF710Q8N1W2 664 aa8.31□□□□□ -1.08
SPARCL1-204ENST00000458304 SPRYD3Q8NCJ5 442 aa8.31□□□□□ -1.08
SPARCL1-204ENST00000458304 ZSWIM6Q9HCJ5 1215 aa8.31□□□□□ -1.08
SPARCL1-204ENST00000458304 POTEB3A0JP26 581 aa8.3□□□□□ -1.08
SPARCL1-204ENST00000458304 GPR153Q6NV75 609 aa8.3□□□□□ -1.08
SPARCL1-204ENST00000458304 POTEBQ6S5H4 581 aa8.3□□□□□ -1.08
SPARCL1-204ENST00000458304 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
SPARCL1-204ENST00000458304 RIMBP2O15034 1052 aa8.29□□□□□ -1.08
SPARCL1-204ENST00000458304 EMP3P54852 163 aa8.29□□□□□ -1.08
SPARCL1-204ENST00000458304 CDAN1Q8IWY9 1227 aa8.29□□□□□ -1.08
SPARCL1-204ENST00000458304 NPM2Q86SE8 214 aaKnown RBP8.28□□□□□ -1.08
SPARCL1-204ENST00000458304 GPHNQ9NQX3 736 aaPredicted RBP8.28□□□□□ -1.08
SPARCL1-204ENST00000458304 FAM205CA6NFA0 338 aa8.26□□□□□ -1.09
SPARCL1-204ENST00000458304 SLC34A2O95436 690 aa8.26□□□□□ -1.09
SPARCL1-204ENST00000458304 FOXK1P85037 733 aa8.26□□□□□ -1.09
SPARCL1-204ENST00000458304 HS3ST6Q96QI5 342 aa8.26□□□□□ -1.09
SPARCL1-204ENST00000458304 CRISPLD2Q9H0B8 497 aa8.26□□□□□ -1.09
SPARCL1-204ENST00000458304 SUPT5HO00267 1087 aaKnown RBP8.24□□□□□ -1.09
SPARCL1-204ENST00000458304 DSG2Q14126 1118 aa8.24□□□□□ -1.09
SPARCL1-204ENST00000458304 ARSIQ5FYB1 569 aa8.24□□□□□ -1.09
SPARCL1-204ENST00000458304 NCKAP5LQ9HCH0 1330 aa8.24□□□□□ -1.09
SPARCL1-204ENST00000458304 KHSRPQ92945 711 aaKnown RBP eCLIP8.23□□□□□ -1.09
SPARCL1-204ENST00000458304 PLPP6Q8IY26 295 aa8.22□□□□□ -1.09
SPARCL1-204ENST00000458304 PCDHGA4Q9Y5G9 962 aa8.21□□□□□ -1.1
SPARCL1-204ENST00000458304 CADPS2Q86UW7 1296 aa8.2□□□□□ -1.1
SPARCL1-204ENST00000458304 ERBB3P21860 1342 aa8.2□□□□□ -1.1
SPARCL1-204ENST00000458304 PTCD2Q8WV60 388 aaKnown RBP8.19□□□□□ -1.1
SPARCL1-204ENST00000458304 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
SPARCL1-204ENST00000458304 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
SPARCL1-204ENST00000458304 KDM4FA0A1W2PPD8 638 aa8.18□□□□□ -1.1
SPARCL1-204ENST00000458304 PDE4AP27815 886 aa8.18□□□□□ -1.1
SPARCL1-204ENST00000458304 ZNF316A6NFI3 1004 aaPredicted RBP8.17□□□□□ -1.1
SPARCL1-204ENST00000458304 NUDT7P0C024 238 aa8.17□□□□□ -1.1
SPARCL1-204ENST00000458304 TRIM26Q12899 539 aaPredicted RBP8.17□□□□□ -1.1
SPARCL1-204ENST00000458304 MFSD10Q14728 455 aa8.17□□□□□ -1.1
SPARCL1-204ENST00000458304 VARS2Q5ST30 1063 aaKnown RBP8.17□□□□□ -1.1
SPARCL1-204ENST00000458304 PPP1R15BQ5SWA1 713 aa8.17□□□□□ -1.1
SPARCL1-204ENST00000458304 PLSCR2Q9NRY7 297 aa8.17□□□□□ -1.1
SPARCL1-204ENST00000458304 OXER1Q8TDS5 423 aa8.15□□□□□ -1.1
SPARCL1-204ENST00000458304 ZNF687Q8N1G0 1237 aa8.14□□□□□ -1.11
SPARCL1-204ENST00000458304 LARP6Q9BRS8 491 aaKnown RBP8.14□□□□□ -1.11
SPARCL1-204ENST00000458304 UBTFP17480 764 aaKnown RBP8.13□□□□□ -1.11
SPARCL1-204ENST00000458304 DDX27Q96GQ7 796 aaKnown RBP8.13□□□□□ -1.11
SPARCL1-204ENST00000458304 LHX6Q9UPM6 363 aa8.13□□□□□ -1.11
SPARCL1-204ENST00000458304 SPNS2Q8IVW8 549 aa8.1□□□□□ -1.11
SPARCL1-204ENST00000458304 TBC1D12O60347 775 aa8.09□□□□□ -1.11
SPARCL1-204ENST00000458304 UPF1Q92900 1129 aaKnown RBP eCLIP8.09□□□□□ -1.11
SPARCL1-204ENST00000458304 TTBK1Q5TCY1 1321 aaPredicted RBP8.07□□□□□ -1.12
SPARCL1-204ENST00000458304 POTEEQ6S8J3 1075 aa8.07□□□□□ -1.12
SPARCL1-204ENST00000458304 EMILIN3Q9NT22 766 aa8.07□□□□□ -1.12
SPARCL1-204ENST00000458304 HRCP23327 699 aa8.06□□□□□ -1.12
SPARCL1-204ENST00000458304 CAMK2BQ13554 666 aa8.06□□□□□ -1.12
SPARCL1-204ENST00000458304 PSDA5PKW4 1024 aaPredicted RBP8.05□□□□□ -1.12
SPARCL1-204ENST00000458304 MYT1Q01538 1121 aa8.04□□□□□ -1.12
SPARCL1-204ENST00000458304 MMRN1Q13201 1228 aa8.04□□□□□ -1.12
SPARCL1-204ENST00000458304 ANO8Q9HCE9 1232 aaPredicted RBP8.03□□□□□ -1.12
SPARCL1-204ENST00000458304 PBX2P40425 430 aa8.02□□□□□ -1.13
SPARCL1-204ENST00000458304 EVI5O60447 810 aa8.01□□□□□ -1.13
SPARCL1-204ENST00000458304 BRPF1P55201 1214 aaPredicted RBP8.01□□□□□ -1.13
SPARCL1-204ENST00000458304 ZCCHC6Q5VYS8 1495 aaKnown RBP8□□□□□ -1.13
SPARCL1-204ENST00000458304 AXIN2Q9Y2T1 843 aa8□□□□□ -1.13
SPARCL1-204ENST00000458304 FOSBP53539 338 aa7.99□□□□□ -1.13
SPARCL1-204ENST00000458304 MAP3K9P80192 1104 aa7.99□□□□□ -1.13
SPARCL1-204ENST00000458304 LSM11P83369 360 aaKnown RBP eCLIP7.99□□□□□ -1.13
SPARCL1-204ENST00000458304 PPP4R3BQ5MIZ7 849 aa7.99□□□□□ -1.13
SPARCL1-204ENST00000458304 ARHGAP33O14559 1287 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms