RNA–Protein interactions for RNA: ENST00000454716.1

RPS3AP53-201, Transcript of ribosomal protein S3a pseudogene 53, humanhuman

BASIC

Gene RPS3AP53, Length 778 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP53-201ENST00000454716 TMC2Q8TDI7 906 aa14.58□□□□□ -0.08
RPS3AP53-201ENST00000454716 NKX1-1Q15270 411 aaPredicted RBP14.57□□□□□ -0.08
RPS3AP53-201ENST00000454716 PPP1R37O75864 691 aa14.56□□□□□ -0.08
RPS3AP53-201ENST00000454716 HOXB3P14651 431 aaPredicted RBP14.55□□□□□ -0.08
RPS3AP53-201ENST00000454716 ZSWIM6Q9HCJ5 1215 aa14.55□□□□□ -0.08
RPS3AP53-201ENST00000454716 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
RPS3AP53-201ENST00000454716 EMP3P54852 163 aa14.51□□□□□ -0.09
RPS3AP53-201ENST00000454716 C2orf72A6NCS6 295 aa14.5□□□□□ -0.09
RPS3AP53-201ENST00000454716 KIF3CO14782 793 aa14.5□□□□□ -0.09
RPS3AP53-201ENST00000454716 HOXB1P14653 301 aaPredicted RBP14.48□□□□□ -0.09
RPS3AP53-201ENST00000454716 MARVELD3Q96A59 401 aa14.47□□□□□ -0.09
RPS3AP53-201ENST00000454716 GTPBP6O43824 516 aaPredicted RBP14.45□□□□□ -0.1
RPS3AP53-201ENST00000454716 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
RPS3AP53-201ENST00000454716 CDAN1Q8IWY9 1227 aa14.42□□□□□ -0.1
RPS3AP53-201ENST00000454716 GPHNQ9NQX3 736 aaPredicted RBP14.41□□□□□ -0.1
RPS3AP53-201ENST00000454716 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
RPS3AP53-201ENST00000454716 SLC34A2O95436 690 aa14.38□□□□□ -0.11
RPS3AP53-201ENST00000454716 FOXK1P85037 733 aa14.37□□□□□ -0.11
RPS3AP53-201ENST00000454716 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
RPS3AP53-201ENST00000454716 ERBB3P21860 1342 aa14.36□□□□□ -0.11
RPS3AP53-201ENST00000454716 GPR153Q6NV75 609 aa14.35□□□□□ -0.11
RPS3AP53-201ENST00000454716 PDE4AP27815 886 aa14.34□□□□□ -0.11
RPS3AP53-201ENST00000454716 HS3ST6Q96QI5 342 aa14.33□□□□□ -0.12
RPS3AP53-201ENST00000454716 ARSIQ5FYB1 569 aa14.31□□□□□ -0.12
RPS3AP53-201ENST00000454716 PLPP6Q8IY26 295 aa14.31□□□□□ -0.12
RPS3AP53-201ENST00000454716 CRISPLD2Q9H0B8 497 aa14.3□□□□□ -0.12
RPS3AP53-201ENST00000454716 TBC1D12O60347 775 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 DSG2Q14126 1118 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 PLSCR2Q9NRY7 297 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 PCDHGA4Q9Y5G9 962 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
RPS3AP53-201ENST00000454716 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
RPS3AP53-201ENST00000454716 PPP1R15BQ5SWA1 713 aa14.23□□□□□ -0.13
RPS3AP53-201ENST00000454716 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.13
RPS3AP53-201ENST00000454716 NCKAP5LQ9HCH0 1330 aa14.2□□□□□ -0.14
RPS3AP53-201ENST00000454716 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
RPS3AP53-201ENST00000454716 LARP6Q9BRS8 491 aaKnown RBP14.2□□□□□ -0.14
RPS3AP53-201ENST00000454716 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
RPS3AP53-201ENST00000454716 NUDT7P0C024 238 aa14.19□□□□□ -0.14
RPS3AP53-201ENST00000454716 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
RPS3AP53-201ENST00000454716 PSDA5PKW4 1024 aaPredicted RBP14.18□□□□□ -0.14
RPS3AP53-201ENST00000454716 KHSRPQ92945 711 aaKnown RBP eCLIP14.18□□□□□ -0.14
RPS3AP53-201ENST00000454716 ZNF687Q8N1G0 1237 aa14.17□□□□□ -0.14
RPS3AP53-201ENST00000454716 MFSD10Q14728 455 aa14.15□□□□□ -0.14
RPS3AP53-201ENST00000454716 PAXIP1Q6ZW49 1069 aaPredicted RBP14.13□□□□□ -0.15
RPS3AP53-201ENST00000454716 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
RPS3AP53-201ENST00000454716 OXER1Q8TDS5 423 aa14.11□□□□□ -0.15
RPS3AP53-201ENST00000454716 LHX6Q9UPM6 363 aa14.11□□□□□ -0.15
RPS3AP53-201ENST00000454716 KRTAP3-3Q9BYR6 98 aa14.09□□□□□ -0.15
RPS3AP53-201ENST00000454716 KRTAP3-2Q9BYR7 98 aa14.09□□□□□ -0.15
RPS3AP53-201ENST00000454716 UPF1Q92900 1129 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPS3AP53-201ENST00000454716 PBX2P40425 430 aa14.07□□□□□ -0.16
RPS3AP53-201ENST00000454716 CADPS2Q86UW7 1296 aa14.07□□□□□ -0.16
RPS3AP53-201ENST00000454716 KDM4FA0A1W2PPD8 638 aa14.05□□□□□ -0.16
RPS3AP53-201ENST00000454716 SPNS2Q8IVW8 549 aa14.04□□□□□ -0.16
RPS3AP53-201ENST00000454716 MAP3K9P80192 1104 aa14.02□□□□□ -0.17
RPS3AP53-201ENST00000454716 PPP4R3BQ5MIZ7 849 aa14.02□□□□□ -0.17
RPS3AP53-201ENST00000454716 PTGER2P43116 358 aa13.97□□□□□ -0.17
RPS3AP53-201ENST00000454716 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
RPS3AP53-201ENST00000454716 WDR70Q9NW82 654 aa13.97□□□□□ -0.17
RPS3AP53-201ENST00000454716 EVI5O60447 810 aa13.96□□□□□ -0.17
RPS3AP53-201ENST00000454716 CAMK2BQ13554 666 aa13.95□□□□□ -0.18
RPS3AP53-201ENST00000454716 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
RPS3AP53-201ENST00000454716 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
RPS3AP53-201ENST00000454716 ARHGAP33O14559 1287 aa13.93□□□□□ -0.18
RPS3AP53-201ENST00000454716 LSM11P83369 360 aaKnown RBP eCLIP13.93□□□□□ -0.18
RPS3AP53-201ENST00000454716 EMILIN3Q9NT22 766 aa13.93□□□□□ -0.18
RPS3AP53-201ENST00000454716 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
RPS3AP53-201ENST00000454716 ZNF454Q8N9F8 522 aa13.9□□□□□ -0.18
RPS3AP53-201ENST00000454716 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
RPS3AP53-201ENST00000454716 FOSBP53539 338 aa13.86□□□□□ -0.19
RPS3AP53-201ENST00000454716 E2F4Q16254 413 aa13.85□□□□□ -0.19
RPS3AP53-201ENST00000454716 AXIN2Q9Y2T1 843 aa13.85□□□□□ -0.19
RPS3AP53-201ENST00000454716 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
RPS3AP53-201ENST00000454716 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
RPS3AP53-201ENST00000454716 TK2O00142 265 aa13.82□□□□□ -0.2
RPS3AP53-201ENST00000454716 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
RPS3AP53-201ENST00000454716 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
RPS3AP53-201ENST00000454716 DPYSL4O14531 572 aa13.81□□□□□ -0.2
RPS3AP53-201ENST00000454716 SPDYE16A6NNV3 312 aaPredicted RBP13.8□□□□□ -0.2
RPS3AP53-201ENST00000454716 PTPREP23469 700 aa13.8□□□□□ -0.2
RPS3AP53-201ENST00000454716 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
RPS3AP53-201ENST00000454716 KCNK17Q96T54 332 aa13.8□□□□□ -0.2
RPS3AP53-201ENST00000454716 PHF14O94880 888 aa13.78□□□□□ -0.2
RPS3AP53-201ENST00000454716 RNF166Q96A37 237 aaPredicted RBP13.78□□□□□ -0.2
RPS3AP53-201ENST00000454716 PSEN2P49810 448 aa13.77□□□□□ -0.21
RPS3AP53-201ENST00000454716 ADGRD1Q6QNK2 874 aa13.77□□□□□ -0.21
RPS3AP53-201ENST00000454716 EPAS1Q99814 870 aa13.77□□□□□ -0.21
RPS3AP53-201ENST00000454716 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
RPS3AP53-201ENST00000454716 STAC3Q96MF2 364 aa13.76□□□□□ -0.21
RPS3AP53-201ENST00000454716 ARIH1Q9Y4X5 557 aaPredicted RBP13.76□□□□□ -0.21
RPS3AP53-201ENST00000454716 TSHZ2Q9NRE2 1034 aa13.75□□□□□ -0.21
RPS3AP53-201ENST00000454716 PDIA6Q15084 440 aa13.74□□□□□ -0.21
RPS3AP53-201ENST00000454716 PCDHGA10Q9Y5H3 936 aa13.73□□□□□ -0.21
RPS3AP53-201ENST00000454716 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
RPS3AP53-201ENST00000454716 DMRTA1Q5VZB9 504 aa13.72□□□□□ -0.21
RPS3AP53-201ENST00000454716 SLC4A5Q9BY07 1137 aa13.72□□□□□ -0.21
RPS3AP53-201ENST00000454716 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.21
RPS3AP53-201ENST00000454716 VPS9D1Q9Y2B5 631 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms