RNA–Protein interactions for RNA: ENST00000454635.6

LINC00963-207, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 910 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-207ENST00000454635 ITSN2Q9NZM3 1697 aa17.01■□□□□ 0.31
LINC00963-207ENST00000454635 MAGI2Q86UL8 1455 aa17■□□□□ 0.31
LINC00963-207ENST00000454635 BCORL1Q5H9F3 1711 aa16.98■□□□□ 0.31
LINC00963-207ENST00000454635 ZFYVE16Q7Z3T8 1539 aa16.97■□□□□ 0.31
LINC00963-207ENST00000454635 KDM4FA0A1W2PPD8 638 aa16.97■□□□□ 0.31
LINC00963-207ENST00000454635 EFCAB2Q5VUJ9 269 aa16.97■□□□□ 0.31
LINC00963-207ENST00000454635 ZNF518AQ6AHZ1 1483 aa16.97■□□□□ 0.31
LINC00963-207ENST00000454635 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.31
LINC00963-207ENST00000454635 RAPGEF3O95398 923 aa16.96■□□□□ 0.31
LINC00963-207ENST00000454635 EHBP1L1Q8N3D4 1523 aa16.96■□□□□ 0.3
LINC00963-207ENST00000454635 HECW2Q9P2P5 1572 aa16.94■□□□□ 0.3
LINC00963-207ENST00000454635 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
LINC00963-207ENST00000454635 ADAMTSL3P82987 1691 aa16.94■□□□□ 0.3
LINC00963-207ENST00000454635 KDM5CP41229 1560 aa16.94■□□□□ 0.3
LINC00963-207ENST00000454635 SUPT6HQ7KZ85 1726 aaKnown RBP16.93■□□□□ 0.3
LINC00963-207ENST00000454635 ABCC1P33527 1531 aa16.93■□□□□ 0.3
LINC00963-207ENST00000454635 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
LINC00963-207ENST00000454635 FER1L4A9Z1Z3 1794 aa16.9■□□□□ 0.3
LINC00963-207ENST00000454635 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
LINC00963-207ENST00000454635 MADDQ8WXG6 1647 aa16.87■□□□□ 0.29
LINC00963-207ENST00000454635 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
LINC00963-207ENST00000454635 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
LINC00963-207ENST00000454635 RIMS1Q86UR5 1692 aaKnown RBP16.86■□□□□ 0.29
LINC00963-207ENST00000454635 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
LINC00963-207ENST00000454635 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
LINC00963-207ENST00000454635 ARID4BQ4LE39 1312 aaPredicted RBP16.85■□□□□ 0.29
LINC00963-207ENST00000454635 C9orf84Q5VXU9 1444 aa16.85■□□□□ 0.29
LINC00963-207ENST00000454635 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
LINC00963-207ENST00000454635 ATP10AO60312 1499 aa16.83■□□□□ 0.28
LINC00963-207ENST00000454635 KIDINS220Q9ULH0 1771 aa16.82■□□□□ 0.28
LINC00963-207ENST00000454635 SIGLEC1Q9BZZ2 1709 aa16.82■□□□□ 0.28
LINC00963-207ENST00000454635 ABCA6Q8N139 1617 aa16.82■□□□□ 0.28
LINC00963-207ENST00000454635 DIP2CQ9Y2E4 1556 aa16.82■□□□□ 0.28
LINC00963-207ENST00000454635 SYCP2Q9BX26 1530 aa16.82■□□□□ 0.28
LINC00963-207ENST00000454635 GPATCH8Q9UKJ3 1502 aaKnown RBP16.82■□□□□ 0.28
LINC00963-207ENST00000454635 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
LINC00963-207ENST00000454635 MAP3K1Q13233 1512 aa16.81■□□□□ 0.28
LINC00963-207ENST00000454635 YEATS2Q9ULM3 1422 aa16.81■□□□□ 0.28
LINC00963-207ENST00000454635 LOC105371045A0A1W2PR82 267 aa16.8■□□□□ 0.28
LINC00963-207ENST00000454635 ADGBQ8N7X0 1667 aa16.79■□□□□ 0.28
LINC00963-207ENST00000454635 MYT1LQ9UL68 1186 aa16.79■□□□□ 0.28
LINC00963-207ENST00000454635 PTPRMP28827 1452 aa16.79■□□□□ 0.28
LINC00963-207ENST00000454635 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
LINC00963-207ENST00000454635 INO80Q9ULG1 1556 aaPredicted RBP16.77■□□□□ 0.28
LINC00963-207ENST00000454635 CFDP1Q9UEE9 299 aaPredicted RBP16.77■□□□□ 0.28
LINC00963-207ENST00000454635 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
LINC00963-207ENST00000454635 ARHGEF12Q9NZN5 1544 aa16.75■□□□□ 0.27
LINC00963-207ENST00000454635 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
LINC00963-207ENST00000454635 TRAPPC8Q9Y2L5 1435 aa16.74■□□□□ 0.27
LINC00963-207ENST00000454635 AFAP1Q8N556 730 aa16.74■□□□□ 0.27
LINC00963-207ENST00000454635 ZNF777Q9ULD5 760 aaPredicted RBP16.74■□□□□ 0.27
LINC00963-207ENST00000454635 AGLP35573 1532 aa16.74■□□□□ 0.27
LINC00963-207ENST00000454635 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
LINC00963-207ENST00000454635 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
LINC00963-207ENST00000454635 SETD1BQ9UPS6 1966 aaKnown RBP16.71■□□□□ 0.27
LINC00963-207ENST00000454635 MROH2AA6NES4 1674 aa16.71■□□□□ 0.27
LINC00963-207ENST00000454635 APLP2Q06481 763 aa16.7■□□□□ 0.26
LINC00963-207ENST00000454635 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
LINC00963-207ENST00000454635 ARHGEF5Q12774 1597 aa16.68■□□□□ 0.26
LINC00963-207ENST00000454635 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
LINC00963-207ENST00000454635 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
LINC00963-207ENST00000454635 C3P01024 1663 aa16.67■□□□□ 0.26
LINC00963-207ENST00000454635 CCDC141Q6ZP82 1450 aa16.67■□□□□ 0.26
LINC00963-207ENST00000454635 RSPH4AQ5TD94 716 aa16.65■□□□□ 0.26
LINC00963-207ENST00000454635 RTEL1-TNFRSF6BF6WH68 1400 aa16.64■□□□□ 0.25
LINC00963-207ENST00000454635 CNTLNQ9NXG0 1405 aa16.64■□□□□ 0.25
LINC00963-207ENST00000454635 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC00963-207ENST00000454635 ESF1Q9H501 851 aaKnown RBP16.64■□□□□ 0.25
LINC00963-207ENST00000454635 A2MP01023 1474 aa16.63■□□□□ 0.25
LINC00963-207ENST00000454635 MBD5Q9P267 1494 aa16.63■□□□□ 0.25
LINC00963-207ENST00000454635 MLECQ14165 292 aa16.63■□□□□ 0.25
LINC00963-207ENST00000454635 CROCC2H7BZ55 1655 aa16.62■□□□□ 0.25
LINC00963-207ENST00000454635 MIA2Q96PC5 1412 aa16.62■□□□□ 0.25
LINC00963-207ENST00000454635 MYOM3Q5VTT5 1437 aa16.62■□□□□ 0.25
LINC00963-207ENST00000454635 CLTCQ00610 1675 aaKnown RBP16.61■□□□□ 0.25
LINC00963-207ENST00000454635 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
LINC00963-207ENST00000454635 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
LINC00963-207ENST00000454635 LMTK3Q96Q04 1460 aa16.59■□□□□ 0.25
LINC00963-207ENST00000454635 PTPN23Q9H3S7 1636 aa16.58■□□□□ 0.24
LINC00963-207ENST00000454635 EIF2AK4Q9P2K8 1649 aaKnown RBP16.57■□□□□ 0.24
LINC00963-207ENST00000454635 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
LINC00963-207ENST00000454635 TSPY4P0CV99 314 aa16.55■□□□□ 0.24
LINC00963-207ENST00000454635 TSPY10P0CW01 314 aa16.55■□□□□ 0.24
LINC00963-207ENST00000454635 ZC3H13Q5T200 1668 aaKnown RBP16.55■□□□□ 0.24
LINC00963-207ENST00000454635 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
LINC00963-207ENST00000454635 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.24
LINC00963-207ENST00000454635 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
LINC00963-207ENST00000454635 ZNF142P52746 1687 aaPredicted RBP16.51■□□□□ 0.23
LINC00963-207ENST00000454635 SHANK2Q9UPX8 1470 aa16.51■□□□□ 0.23
LINC00963-207ENST00000454635 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
LINC00963-207ENST00000454635 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
LINC00963-207ENST00000454635 RNF17Q9BXT8 1623 aaKnown RBP16.51■□□□□ 0.23
LINC00963-207ENST00000454635 DHX29Q7Z478 1369 aaKnown RBP16.51■□□□□ 0.23
LINC00963-207ENST00000454635 NPATQ14207 1427 aa16.5■□□□□ 0.23
LINC00963-207ENST00000454635 KDM5DQ9BY66 1539 aa16.5■□□□□ 0.23
LINC00963-207ENST00000454635 MYO3AQ8NEV4 1616 aa16.48■□□□□ 0.23
LINC00963-207ENST00000454635 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
LINC00963-207ENST00000454635 DUOX2Q9NRD8 1548 aa16.47■□□□□ 0.23
LINC00963-207ENST00000454635 TCOF1Q13428 1488 aaKnown RBP16.47■□□□□ 0.23
LINC00963-207ENST00000454635 GGT6Q6P531 493 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms