RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 TMEM121BQ9BXQ6 578 aaPredicted RBP11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 BOLA1Q9Y3E2 137 aa11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 E2F4Q16254 413 aa11.54□□□□□ -0.56
HMGB1P26-201ENST00000452520 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
HMGB1P26-201ENST00000452520 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
HMGB1P26-201ENST00000452520 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
HMGB1P26-201ENST00000452520 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
HMGB1P26-201ENST00000452520 G3V3G9 751 aa11.5□□□□□ -0.57
HMGB1P26-201ENST00000452520 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
HMGB1P26-201ENST00000452520 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
HMGB1P26-201ENST00000452520 TMC2Q8TDI7 906 aa11.45□□□□□ -0.58
HMGB1P26-201ENST00000452520 CAMK2BQ13554 666 aa11.44□□□□□ -0.58
HMGB1P26-201ENST00000452520 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
HMGB1P26-201ENST00000452520 DSG2Q14126 1118 aa11.43□□□□□ -0.58
HMGB1P26-201ENST00000452520 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
HMGB1P26-201ENST00000452520 FOXK1P85037 733 aa11.42□□□□□ -0.58
HMGB1P26-201ENST00000452520 C2orf72A6NCS6 295 aa11.41□□□□□ -0.58
HMGB1P26-201ENST00000452520 KIF3CO14782 793 aa11.41□□□□□ -0.58
HMGB1P26-201ENST00000452520 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.58
HMGB1P26-201ENST00000452520 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
HMGB1P26-201ENST00000452520 TMEM92Q6UXU6 159 aa11.38□□□□□ -0.59
HMGB1P26-201ENST00000452520 PLPP6Q8IY26 295 aa11.36□□□□□ -0.59
HMGB1P26-201ENST00000452520 SEMA3EO15041 775 aa11.34□□□□□ -0.59
HMGB1P26-201ENST00000452520 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
HMGB1P26-201ENST00000452520 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
HMGB1P26-201ENST00000452520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
HMGB1P26-201ENST00000452520 TESPA1A2RU30 521 aaPredicted RBP11.3□□□□□ -0.6
HMGB1P26-201ENST00000452520 DPYSL4O14531 572 aa11.28□□□□□ -0.6
HMGB1P26-201ENST00000452520 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
HMGB1P26-201ENST00000452520 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.26□□□□□ -0.61
HMGB1P26-201ENST00000452520 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
HMGB1P26-201ENST00000452520 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
HMGB1P26-201ENST00000452520 POTEJP0CG39 1038 aa11.23□□□□□ -0.61
HMGB1P26-201ENST00000452520 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
HMGB1P26-201ENST00000452520 SMYD5Q6GMV2 418 aa11.23□□□□□ -0.61
HMGB1P26-201ENST00000452520 POTEB2H3BUK9 544 aa11.22□□□□□ -0.61
HMGB1P26-201ENST00000452520 PDIA6Q15084 440 aa11.21□□□□□ -0.61
HMGB1P26-201ENST00000452520 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
HMGB1P26-201ENST00000452520 UPF1Q92900 1129 aaKnown RBP eCLIP11.2□□□□□ -0.62
HMGB1P26-201ENST00000452520 MLLT3P42568 568 aaPredicted RBP11.19□□□□□ -0.62
HMGB1P26-201ENST00000452520 SLC34A2O95436 690 aa11.17□□□□□ -0.62
HMGB1P26-201ENST00000452520 PTCD2Q8WV60 388 aaKnown RBP11.17□□□□□ -0.62
HMGB1P26-201ENST00000452520 TBC1D12O60347 775 aa11.15□□□□□ -0.62
HMGB1P26-201ENST00000452520 MAMSTRQ6ZN01 415 aa11.12□□□□□ -0.63
HMGB1P26-201ENST00000452520 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
HMGB1P26-201ENST00000452520 EVI5O60447 810 aa11.11□□□□□ -0.63
HMGB1P26-201ENST00000452520 RBM26Q5T8P6 1007 aaKnown RBP11.11□□□□□ -0.63
HMGB1P26-201ENST00000452520 PTGER2P43116 358 aa11.1□□□□□ -0.63
HMGB1P26-201ENST00000452520 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
HMGB1P26-201ENST00000452520 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
HMGB1P26-201ENST00000452520 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
HMGB1P26-201ENST00000452520 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
HMGB1P26-201ENST00000452520 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
HMGB1P26-201ENST00000452520 DDX12PQ92771 950 aa11.05□□□□□ -0.64
HMGB1P26-201ENST00000452520 OSBPP22059 807 aa11.04□□□□□ -0.64
HMGB1P26-201ENST00000452520 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
HMGB1P26-201ENST00000452520 ZMYND10O75800 440 aa11.02□□□□□ -0.65
HMGB1P26-201ENST00000452520 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
HMGB1P26-201ENST00000452520 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
HMGB1P26-201ENST00000452520 GPIHBP1Q8IV16 184 aa11.02□□□□□ -0.65
HMGB1P26-201ENST00000452520 KDM4FA0A1W2PPD8 638 aa11.01□□□□□ -0.65
HMGB1P26-201ENST00000452520 ARSIQ5FYB1 569 aa10.98□□□□□ -0.65
HMGB1P26-201ENST00000452520 BARGINQ6ZT62 677 aa10.97□□□□□ -0.65
HMGB1P26-201ENST00000452520 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
HMGB1P26-201ENST00000452520 NUTM2FA1L443 756 aa10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 PRIM1P49642 420 aaKnown RBP10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 GPR153Q6NV75 609 aa10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 PHF14O94880 888 aa10.95□□□□□ -0.66
HMGB1P26-201ENST00000452520 KHSRPQ92945 711 aaKnown RBP eCLIP10.95□□□□□ -0.66
HMGB1P26-201ENST00000452520 SLC24A3Q9HC58 644 aa10.95□□□□□ -0.66
HMGB1P26-201ENST00000452520 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
HMGB1P26-201ENST00000452520 EPAS1Q99814 870 aa10.94□□□□□ -0.66
HMGB1P26-201ENST00000452520 PCDHGA10Q9Y5H3 936 aa10.94□□□□□ -0.66
HMGB1P26-201ENST00000452520 NUDT7P0C024 238 aa10.93□□□□□ -0.66
HMGB1P26-201ENST00000452520 LHX8Q68G74 356 aa10.93□□□□□ -0.66
HMGB1P26-201ENST00000452520 SNPHO15079 494 aa10.92□□□□□ -0.66
HMGB1P26-201ENST00000452520 GPR37O15354 613 aa10.92□□□□□ -0.66
HMGB1P26-201ENST00000452520 KRI1Q8N9T8 703 aaKnown RBP10.91□□□□□ -0.66
HMGB1P26-201ENST00000452520 JPH4Q96JJ6 628 aa10.9□□□□□ -0.66
HMGB1P26-201ENST00000452520 FOSBP53539 338 aa10.89□□□□□ -0.67
HMGB1P26-201ENST00000452520 EN1Q05925 392 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P26-201ENST00000452520 TYW1BQ6NUM6 668 aa10.89□□□□□ -0.67
HMGB1P26-201ENST00000452520 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
HMGB1P26-201ENST00000452520 FCHSD2O94868 740 aa10.88□□□□□ -0.67
HMGB1P26-201ENST00000452520 PTGDRQ13258 359 aa10.87□□□□□ -0.67
HMGB1P26-201ENST00000452520 FBXW7Q969H0 707 aa10.87□□□□□ -0.67
HMGB1P26-201ENST00000452520 MAP3K7O43318 606 aa10.86□□□□□ -0.67
HMGB1P26-201ENST00000452520 ZNF454Q8N9F8 522 aa10.86□□□□□ -0.67
HMGB1P26-201ENST00000452520 AK7Q96M32 723 aa10.86□□□□□ -0.67
HMGB1P26-201ENST00000452520 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
HMGB1P26-201ENST00000452520 HIC1Q14526 733 aa10.85□□□□□ -0.67
HMGB1P26-201ENST00000452520 NPDC1Q9NQX5 325 aaPredicted RBP10.85□□□□□ -0.67
HMGB1P26-201ENST00000452520 LHX6Q9UPM6 363 aa10.85□□□□□ -0.67
HMGB1P26-201ENST00000452520 GNPATO15228 680 aa10.84□□□□□ -0.67
HMGB1P26-201ENST00000452520 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
HMGB1P26-201ENST00000452520 TSR1Q2NL82 804 aaKnown RBP10.83□□□□□ -0.68
HMGB1P26-201ENST00000452520 CDHR5Q9HBB8 845 aa10.83□□□□□ -0.68
HMGB1P26-201ENST00000452520 MINK1Q8N4C8 1332 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms