RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 MAPKBP1O60336 1514 aa11.03□□□□□ -0.64
KARSP1-201ENST00000451871 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
KARSP1-201ENST00000451871 ABCA10Q8WWZ4 1543 aa11.01□□□□□ -0.65
KARSP1-201ENST00000451871 GSE1Q14687 1217 aa11□□□□□ -0.65
KARSP1-201ENST00000451871 PRG4Q92954 1404 aaPredicted RBP11□□□□□ -0.65
KARSP1-201ENST00000451871 TOP2BQ02880 1626 aa10.98□□□□□ -0.65
KARSP1-201ENST00000451871 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
KARSP1-201ENST00000451871 DCAF8Q5TAQ9 597 aa10.98□□□□□ -0.65
KARSP1-201ENST00000451871 JPH4Q96JJ6 628 aa10.98□□□□□ -0.65
KARSP1-201ENST00000451871 ADAMTS12P58397 1594 aa10.98□□□□□ -0.65
KARSP1-201ENST00000451871 RASEFQ8IZ41 740 aa10.97□□□□□ -0.65
KARSP1-201ENST00000451871 FHAD1B1AJZ9 1412 aa10.95□□□□□ -0.66
KARSP1-201ENST00000451871 PPRC1Q5VV67 1664 aaKnown RBP10.94□□□□□ -0.66
KARSP1-201ENST00000451871 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
KARSP1-201ENST00000451871 ADCY10Q96PN6 1610 aa10.93□□□□□ -0.66
KARSP1-201ENST00000451871 TSHZ2Q9NRE2 1034 aa10.93□□□□□ -0.66
KARSP1-201ENST00000451871 CHADLQ6NUI6 762 aa10.9□□□□□ -0.67
KARSP1-201ENST00000451871 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.67
KARSP1-201ENST00000451871 WRNQ14191 1432 aaPredicted RBP eCLIP10.89□□□□□ -0.67
KARSP1-201ENST00000451871 SPRYD3Q8NCJ5 442 aa10.88□□□□□ -0.67
KARSP1-201ENST00000451871 RIOK3O14730 519 aaKnown RBP10.88□□□□□ -0.67
KARSP1-201ENST00000451871 ERICH3Q5RHP9 1530 aa10.87□□□□□ -0.67
KARSP1-201ENST00000451871 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
KARSP1-201ENST00000451871 CERKQ8TCT0 537 aa10.84□□□□□ -0.67
KARSP1-201ENST00000451871 RUSC2Q8N2Y8 1516 aa10.83□□□□□ -0.68
KARSP1-201ENST00000451871 PYGBP11216 843 aa10.83□□□□□ -0.68
KARSP1-201ENST00000451871 COL17A1Q9UMD9 1497 aaPredicted RBP10.82□□□□□ -0.68
KARSP1-201ENST00000451871 PCF11O94913 1555 aaKnown RBP10.82□□□□□ -0.68
KARSP1-201ENST00000451871 NKX1-1Q15270 411 aaPredicted RBP10.8□□□□□ -0.68
KARSP1-201ENST00000451871 GLI2P10070 1586 aa10.8□□□□□ -0.68
KARSP1-201ENST00000451871 FARP1Q9Y4F1 1045 aaPredicted RBP10.8□□□□□ -0.68
KARSP1-201ENST00000451871 KIF21BO75037 1637 aa10.79□□□□□ -0.68
KARSP1-201ENST00000451871 VGFO15240 615 aaPredicted RBP10.78□□□□□ -0.68
KARSP1-201ENST00000451871 ASXL2Q76L83 1435 aa10.78□□□□□ -0.68
KARSP1-201ENST00000451871 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
KARSP1-201ENST00000451871 STK25O00506 426 aa10.77□□□□□ -0.68
KARSP1-201ENST00000451871 PLB1Q6P1J6 1458 aa10.77□□□□□ -0.68
KARSP1-201ENST00000451871 PTPRGP23470 1445 aa10.77□□□□□ -0.69
KARSP1-201ENST00000451871 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
KARSP1-201ENST00000451871 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
KARSP1-201ENST00000451871 ABCC2Q92887 1545 aa10.76□□□□□ -0.69
KARSP1-201ENST00000451871 KIAA0586Q9BVV6 1533 aa10.76□□□□□ -0.69
KARSP1-201ENST00000451871 TTBK1Q5TCY1 1321 aaPredicted RBP10.75□□□□□ -0.69
KARSP1-201ENST00000451871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.75□□□□□ -0.69
KARSP1-201ENST00000451871 FXR2P51116 673 aaKnown RBP eCLIP10.75□□□□□ -0.69
KARSP1-201ENST00000451871 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
KARSP1-201ENST00000451871 MAP3K4Q9Y6R4 1608 aa10.74□□□□□ -0.69
KARSP1-201ENST00000451871 PTPRMP28827 1452 aa10.74□□□□□ -0.69
KARSP1-201ENST00000451871 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
KARSP1-201ENST00000451871 TEX14Q8IWB6 1497 aa10.72□□□□□ -0.69
KARSP1-201ENST00000451871 ADAMTSL3P82987 1691 aa10.72□□□□□ -0.69
KARSP1-201ENST00000451871 CUL7Q14999 1698 aa10.72□□□□□ -0.69
KARSP1-201ENST00000451871 BCL11BQ9C0K0 894 aaPredicted RBP10.72□□□□□ -0.69
KARSP1-201ENST00000451871 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
KARSP1-201ENST00000451871 EPRSP07814 1512 aaKnown RBP10.71□□□□□ -0.7
KARSP1-201ENST00000451871 STK24Q9Y6E0 443 aa10.7□□□□□ -0.7
KARSP1-201ENST00000451871 TNIKQ9UKE5 1360 aa10.7□□□□□ -0.7
KARSP1-201ENST00000451871 NBR1Q14596 966 aa10.68□□□□□ -0.7
KARSP1-201ENST00000451871 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
KARSP1-201ENST00000451871 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
KARSP1-201ENST00000451871 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
KARSP1-201ENST00000451871 CARMIL2Q6F5E8 1435 aa10.66□□□□□ -0.7
KARSP1-201ENST00000451871 PIP4P2Q8N4L2 257 aa10.66□□□□□ -0.7
KARSP1-201ENST00000451871 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
KARSP1-201ENST00000451871 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.71
KARSP1-201ENST00000451871 IGF1RP08069 1367 aa10.64□□□□□ -0.71
KARSP1-201ENST00000451871 KDM5BQ9UGL1 1544 aa10.64□□□□□ -0.71
KARSP1-201ENST00000451871 MADDQ8WXG6 1647 aa10.64□□□□□ -0.71
KARSP1-201ENST00000451871 PCDHB8Q9UN66 801 aa10.64□□□□□ -0.71
KARSP1-201ENST00000451871 PCDHB13Q9Y5F0 798 aa10.64□□□□□ -0.71
KARSP1-201ENST00000451871 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
KARSP1-201ENST00000451871 BCORL1Q5H9F3 1711 aa10.62□□□□□ -0.71
KARSP1-201ENST00000451871 HSPA2P54652 639 aa10.62□□□□□ -0.71
KARSP1-201ENST00000451871 ZCCHC11Q5TAX3 1644 aaKnown RBP10.61□□□□□ -0.71
KARSP1-201ENST00000451871 RIMS1Q86UR5 1692 aaKnown RBP10.61□□□□□ -0.71
KARSP1-201ENST00000451871 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
KARSP1-201ENST00000451871 CD109Q6YHK3 1445 aa10.59□□□□□ -0.71
KARSP1-201ENST00000451871 MAGI3Q5TCQ9 1506 aa10.59□□□□□ -0.71
KARSP1-201ENST00000451871 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
KARSP1-201ENST00000451871 PDAP1Q13442 181 aaKnown RBP10.57□□□□□ -0.72
KARSP1-201ENST00000451871 DISP1Q96F81 1524 aa10.57□□□□□ -0.72
KARSP1-201ENST00000451871 CFAP43Q8NDM7 1665 aa10.57□□□□□ -0.72
KARSP1-201ENST00000451871 IQGAP2Q13576 1575 aa10.57□□□□□ -0.72
KARSP1-201ENST00000451871 MED1Q15648 1581 aaPredicted RBP10.56□□□□□ -0.72
KARSP1-201ENST00000451871 KCNH8Q96L42 1107 aa10.56□□□□□ -0.72
KARSP1-201ENST00000451871 KIF27Q86VH2 1401 aa10.55□□□□□ -0.72
KARSP1-201ENST00000451871 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
KARSP1-201ENST00000451871 ZNF579Q8NAF0 562 aaKnown RBP10.55□□□□□ -0.72
KARSP1-201ENST00000451871 CARMIL1Q5VZK9 1371 aa10.55□□□□□ -0.72
KARSP1-201ENST00000451871 MAP3K13O43283 966 aa10.54□□□□□ -0.72
KARSP1-201ENST00000451871 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
KARSP1-201ENST00000451871 PSEN1P49768 467 aa10.54□□□□□ -0.72
KARSP1-201ENST00000451871 KIF12Q96FN5 646 aa10.53□□□□□ -0.72
KARSP1-201ENST00000451871 ARAP3Q8WWN8 1544 aa10.53□□□□□ -0.72
KARSP1-201ENST00000451871 STRCQ7RTU9 1775 aa10.53□□□□□ -0.72
KARSP1-201ENST00000451871 SUPT5HO00267 1087 aaKnown RBP10.52□□□□□ -0.72
KARSP1-201ENST00000451871 RYDENQ9NUL5 291 aaKnown RBP10.52□□□□□ -0.73
KARSP1-201ENST00000451871 GTF3C3Q9Y5Q9 886 aa10.51□□□□□ -0.73
KARSP1-201ENST00000451871 IQSEC2Q5JU85 1478 aa10.5□□□□□ -0.73
KARSP1-201ENST00000451871 ARID4BQ4LE39 1312 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms