RNA–Protein interactions for RNA: ENST00000449858.2

GAPDHP17-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 17, humanhuman

BASIC

Gene GAPDHP17, Length 1,001 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP17-201ENST00000449858 HS6ST3Q8IZP7 471 aa9.83□□□□□ -0.84
GAPDHP17-201ENST00000449858 SOX12O15370 315 aa9.81□□□□□ -0.84
GAPDHP17-201ENST00000449858 DNAJC5Q9H3Z4 198 aa9.8□□□□□ -0.84
GAPDHP17-201ENST00000449858 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
GAPDHP17-201ENST00000449858 HOXB1P14653 301 aaPredicted RBP9.78□□□□□ -0.84
GAPDHP17-201ENST00000449858 ERBB3P21860 1342 aa9.77□□□□□ -0.85
GAPDHP17-201ENST00000449858 FBXO22Q8NEZ5 403 aa9.75□□□□□ -0.85
GAPDHP17-201ENST00000449858 DOK7Q18PE1 504 aa9.74□□□□□ -0.85
GAPDHP17-201ENST00000449858 MS4A4AQ96JQ5 239 aa9.74□□□□□ -0.85
GAPDHP17-201ENST00000449858 MFRPQ9BY79 579 aa9.74□□□□□ -0.85
GAPDHP17-201ENST00000449858 PHF8Q9UPP1 1060 aa9.73□□□□□ -0.85
GAPDHP17-201ENST00000449858 NLRP6P59044 892 aa9.72□□□□□ -0.85
GAPDHP17-201ENST00000449858 VARS2Q5ST30 1063 aaKnown RBP9.71□□□□□ -0.86
GAPDHP17-201ENST00000449858 BBXQ8WY36 941 aaPredicted RBP9.7□□□□□ -0.86
GAPDHP17-201ENST00000449858 RNF166Q96A37 237 aaPredicted RBP9.69□□□□□ -0.86
GAPDHP17-201ENST00000449858 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
GAPDHP17-201ENST00000449858 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
GAPDHP17-201ENST00000449858 TMEM92Q6UXU6 159 aa9.67□□□□□ -0.86
GAPDHP17-201ENST00000449858 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.67□□□□□ -0.86
GAPDHP17-201ENST00000449858 MICALL2Q8IY33 904 aa9.65□□□□□ -0.86
GAPDHP17-201ENST00000449858 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
GAPDHP17-201ENST00000449858 MYT1LQ9UL68 1186 aa9.63□□□□□ -0.87
GAPDHP17-201ENST00000449858 GTPBP6O43824 516 aaPredicted RBP9.6□□□□□ -0.87
GAPDHP17-201ENST00000449858 GPR153Q6NV75 609 aa9.6□□□□□ -0.87
GAPDHP17-201ENST00000449858 ZNF687Q8N1G0 1237 aa9.6□□□□□ -0.87
GAPDHP17-201ENST00000449858 ZSWIM6Q9HCJ5 1215 aa9.59□□□□□ -0.87
GAPDHP17-201ENST00000449858 PPP1R37O75864 691 aa9.58□□□□□ -0.88
GAPDHP17-201ENST00000449858 PAXIP1Q6ZW49 1069 aaPredicted RBP9.58□□□□□ -0.88
GAPDHP17-201ENST00000449858 SPRYD3Q8NCJ5 442 aa9.58□□□□□ -0.88
GAPDHP17-201ENST00000449858 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
GAPDHP17-201ENST00000449858 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
GAPDHP17-201ENST00000449858 ANKRD13DQ6ZTN6 518 aa9.54□□□□□ -0.88
GAPDHP17-201ENST00000449858 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.88
GAPDHP17-201ENST00000449858 PTGER2P43116 358 aa9.49□□□□□ -0.89
GAPDHP17-201ENST00000449858 ZNF316A6NFI3 1004 aaPredicted RBP9.48□□□□□ -0.89
GAPDHP17-201ENST00000449858 KIF3CO14782 793 aa9.48□□□□□ -0.89
GAPDHP17-201ENST00000449858 LSM11P83369 360 aaKnown RBP eCLIP9.45□□□□□ -0.9
GAPDHP17-201ENST00000449858 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
GAPDHP17-201ENST00000449858 C2orf72A6NCS6 295 aa9.41□□□□□ -0.9
GAPDHP17-201ENST00000449858 NUDT7P0C024 238 aa9.4□□□□□ -0.9
GAPDHP17-201ENST00000449858 TMC2Q8TDI7 906 aa9.4□□□□□ -0.9
GAPDHP17-201ENST00000449858 CRISPLD2Q9H0B8 497 aa9.39□□□□□ -0.91
GAPDHP17-201ENST00000449858 AXIN2Q9Y2T1 843 aa9.39□□□□□ -0.91
GAPDHP17-201ENST00000449858 GPHNQ9NQX3 736 aaPredicted RBP9.38□□□□□ -0.91
GAPDHP17-201ENST00000449858 PDE4AP27815 886 aa9.37□□□□□ -0.91
GAPDHP17-201ENST00000449858 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
GAPDHP17-201ENST00000449858 NCKAP5LQ9HCH0 1330 aa9.36□□□□□ -0.91
GAPDHP17-201ENST00000449858 FOXK1P85037 733 aa9.36□□□□□ -0.91
GAPDHP17-201ENST00000449858 CADPS2Q86UW7 1296 aa9.36□□□□□ -0.91
GAPDHP17-201ENST00000449858 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
GAPDHP17-201ENST00000449858 LHX6Q9UPM6 363 aa9.36□□□□□ -0.91
GAPDHP17-201ENST00000449858 PBX2P40425 430 aa9.35□□□□□ -0.91
GAPDHP17-201ENST00000449858 HAP1P54257 671 aaPredicted RBP9.34□□□□□ -0.91
GAPDHP17-201ENST00000449858 LARP6Q9BRS8 491 aaKnown RBP9.33□□□□□ -0.92
GAPDHP17-201ENST00000449858 PLA2G2EQ9NZK7 142 aa9.33□□□□□ -0.92
GAPDHP17-201ENST00000449858 PCDHGA4Q9Y5G9 962 aa9.33□□□□□ -0.92
GAPDHP17-201ENST00000449858 SLC34A2O95436 690 aa9.32□□□□□ -0.92
GAPDHP17-201ENST00000449858 DSG2Q14126 1118 aa9.31□□□□□ -0.92
GAPDHP17-201ENST00000449858 MFSD10Q14728 455 aa9.31□□□□□ -0.92
GAPDHP17-201ENST00000449858 PLPP6Q8IY26 295 aa9.29□□□□□ -0.92
GAPDHP17-201ENST00000449858 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
GAPDHP17-201ENST00000449858 HCSTQ9UBK5 93 aa9.28□□□□□ -0.92
GAPDHP17-201ENST00000449858 ADGRD1Q6QNK2 874 aa9.27□□□□□ -0.93
GAPDHP17-201ENST00000449858 WDR70Q9NW82 654 aa9.27□□□□□ -0.93
GAPDHP17-201ENST00000449858 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
GAPDHP17-201ENST00000449858 PTCD2Q8WV60 388 aaKnown RBP9.26□□□□□ -0.93
GAPDHP17-201ENST00000449858 ARHGAP33O14559 1287 aa9.24□□□□□ -0.93
GAPDHP17-201ENST00000449858 KDM4FA0A1W2PPD8 638 aa9.21□□□□□ -0.94
GAPDHP17-201ENST00000449858 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
GAPDHP17-201ENST00000449858 PSEN2P49810 448 aa9.2□□□□□ -0.94
GAPDHP17-201ENST00000449858 OXER1Q8TDS5 423 aa9.2□□□□□ -0.94
GAPDHP17-201ENST00000449858 CAMK2BQ13554 666 aa9.19□□□□□ -0.94
GAPDHP17-201ENST00000449858 PSDA5PKW4 1024 aaPredicted RBP9.18□□□□□ -0.94
GAPDHP17-201ENST00000449858 VSIG10Q8N0Z9 540 aa9.18□□□□□ -0.94
GAPDHP17-201ENST00000449858 HRO43593 1189 aa9.17□□□□□ -0.94
GAPDHP17-201ENST00000449858 TBC1D12O60347 775 aa9.17□□□□□ -0.94
GAPDHP17-201ENST00000449858 KCTD12Q96CX2 325 aaKnown RBP9.17□□□□□ -0.94
GAPDHP17-201ENST00000449858 TK2O00142 265 aa9.16□□□□□ -0.94
GAPDHP17-201ENST00000449858 E2F4Q16254 413 aa9.16□□□□□ -0.94
GAPDHP17-201ENST00000449858 UPF1Q92900 1129 aaKnown RBP eCLIP9.16□□□□□ -0.94
GAPDHP17-201ENST00000449858 EMILIN3Q9NT22 766 aa9.16□□□□□ -0.94
GAPDHP17-201ENST00000449858 KDM2AQ9Y2K7 1162 aa9.14□□□□□ -0.95
GAPDHP17-201ENST00000449858 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
GAPDHP17-201ENST00000449858 PPP4R3BQ5MIZ7 849 aa9.11□□□□□ -0.95
GAPDHP17-201ENST00000449858 STAC3Q96MF2 364 aa9.11□□□□□ -0.95
GAPDHP17-201ENST00000449858 KCNK17Q96T54 332 aa9.1□□□□□ -0.95
GAPDHP17-201ENST00000449858 ANO8Q9HCE9 1232 aaPredicted RBP9.1□□□□□ -0.95
GAPDHP17-201ENST00000449858 ARIH1Q9Y4X5 557 aaPredicted RBP9.1□□□□□ -0.95
GAPDHP17-201ENST00000449858 PTPN5P54829 565 aa9.08□□□□□ -0.96
GAPDHP17-201ENST00000449858 DPYSL4O14531 572 aa9.07□□□□□ -0.96
GAPDHP17-201ENST00000449858 P3H3Q8IVL6 736 aa9.07□□□□□ -0.96
GAPDHP17-201ENST00000449858 EVI5O60447 810 aa9.06□□□□□ -0.96
GAPDHP17-201ENST00000449858 SLC24A1O60721 1099 aa9.06□□□□□ -0.96
GAPDHP17-201ENST00000449858 KCNV2Q8TDN2 545 aa9.05□□□□□ -0.96
GAPDHP17-201ENST00000449858 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
GAPDHP17-201ENST00000449858 KCNH8Q96L42 1107 aa9.04□□□□□ -0.96
GAPDHP17-201ENST00000449858 VPS9D1Q9Y2B5 631 aa9.04□□□□□ -0.96
GAPDHP17-201ENST00000449858 SPDYE16A6NNV3 312 aaPredicted RBP9.01□□□□□ -0.97
GAPDHP17-201ENST00000449858 PDIA6Q15084 440 aa9.01□□□□□ -0.97
GAPDHP17-201ENST00000449858 FOSBP53539 338 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms