RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ARIH1Q9Y4X5 557 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P16-201ENST00000447155 G3V3G9 751 aa9.68□□□□□ -0.86
HMGB1P16-201ENST00000447155 PPP1R15BQ5SWA1 713 aa9.68□□□□□ -0.86
HMGB1P16-201ENST00000447155 TMEM121BQ9BXQ6 578 aaPredicted RBP9.68□□□□□ -0.86
HMGB1P16-201ENST00000447155 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
HMGB1P16-201ENST00000447155 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
HMGB1P16-201ENST00000447155 L3MBTL3Q96JM7 780 aaPredicted RBP9.66□□□□□ -0.86
HMGB1P16-201ENST00000447155 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
HMGB1P16-201ENST00000447155 TMC2Q8TDI7 906 aa9.65□□□□□ -0.86
HMGB1P16-201ENST00000447155 SEC24BO95487 1268 aa9.64□□□□□ -0.87
HMGB1P16-201ENST00000447155 PELP1Q8IZL8 1130 aaKnown RBP9.64□□□□□ -0.87
HMGB1P16-201ENST00000447155 SLC39A7Q92504 469 aa9.64□□□□□ -0.87
HMGB1P16-201ENST00000447155 TESPA1A2RU30 521 aaPredicted RBP9.63□□□□□ -0.87
HMGB1P16-201ENST00000447155 DSG2Q14126 1118 aa9.63□□□□□ -0.87
HMGB1P16-201ENST00000447155 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
HMGB1P16-201ENST00000447155 SEMA3EO15041 775 aa9.62□□□□□ -0.87
HMGB1P16-201ENST00000447155 FOXK1P85037 733 aa9.62□□□□□ -0.87
HMGB1P16-201ENST00000447155 C7P10643 843 aa9.61□□□□□ -0.87
HMGB1P16-201ENST00000447155 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P16-201ENST00000447155 C2orf72A6NCS6 295 aa9.58□□□□□ -0.88
HMGB1P16-201ENST00000447155 KIF3CO14782 793 aa9.58□□□□□ -0.88
HMGB1P16-201ENST00000447155 SMYD5Q6GMV2 418 aa9.58□□□□□ -0.88
HMGB1P16-201ENST00000447155 PLPP6Q8IY26 295 aa9.57□□□□□ -0.88
HMGB1P16-201ENST00000447155 SP7Q8TDD2 431 aaPredicted RBP9.56□□□□□ -0.88
HMGB1P16-201ENST00000447155 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
HMGB1P16-201ENST00000447155 METRNQ9UJH8 293 aa9.56□□□□□ -0.88
HMGB1P16-201ENST00000447155 POTEFA5A3E0 1075 aa9.55□□□□□ -0.88
HMGB1P16-201ENST00000447155 SPDYE16A6NNV3 312 aaPredicted RBP9.55□□□□□ -0.88
HMGB1P16-201ENST00000447155 DPYSL4O14531 572 aa9.54□□□□□ -0.88
HMGB1P16-201ENST00000447155 POTEIP0CG38 1075 aa9.54□□□□□ -0.88
HMGB1P16-201ENST00000447155 TMEM92Q6UXU6 159 aa9.52□□□□□ -0.89
HMGB1P16-201ENST00000447155 PDIA6Q15084 440 aa9.51□□□□□ -0.89
HMGB1P16-201ENST00000447155 C3orf67Q6ZVT6 689 aa9.5□□□□□ -0.89
HMGB1P16-201ENST00000447155 ZC3H15Q8WU90 426 aaKnown RBP9.49□□□□□ -0.89
HMGB1P16-201ENST00000447155 MLLT3P42568 568 aaPredicted RBP9.48□□□□□ -0.89
HMGB1P16-201ENST00000447155 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
HMGB1P16-201ENST00000447155 OXER1Q8TDS5 423 aa9.45□□□□□ -0.9
HMGB1P16-201ENST00000447155 UPF1Q92900 1129 aaKnown RBP eCLIP9.44□□□□□ -0.9
HMGB1P16-201ENST00000447155 RBM26Q5T8P6 1007 aaKnown RBP9.41□□□□□ -0.9
HMGB1P16-201ENST00000447155 GPIHBP1Q8IV16 184 aa9.41□□□□□ -0.9
HMGB1P16-201ENST00000447155 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
HMGB1P16-201ENST00000447155 TBC1D12O60347 775 aa9.4□□□□□ -0.9
HMGB1P16-201ENST00000447155 ZMYND10O75800 440 aa9.4□□□□□ -0.9
HMGB1P16-201ENST00000447155 SLC34A2O95436 690 aa9.38□□□□□ -0.91
HMGB1P16-201ENST00000447155 PTGER2P43116 358 aa9.38□□□□□ -0.91
HMGB1P16-201ENST00000447155 PTCD2Q8WV60 388 aaKnown RBP9.38□□□□□ -0.91
HMGB1P16-201ENST00000447155 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P16-201ENST00000447155 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
HMGB1P16-201ENST00000447155 GRXCR2A6NFK2 248 aa9.36□□□□□ -0.91
HMGB1P16-201ENST00000447155 EVI5O60447 810 aa9.36□□□□□ -0.91
HMGB1P16-201ENST00000447155 SLC24A3Q9HC58 644 aa9.36□□□□□ -0.91
HMGB1P16-201ENST00000447155 DDX12PQ92771 950 aa9.32□□□□□ -0.92
HMGB1P16-201ENST00000447155 ANO8Q9HCE9 1232 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P16-201ENST00000447155 OSBPP22059 807 aa9.31□□□□□ -0.92
HMGB1P16-201ENST00000447155 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
HMGB1P16-201ENST00000447155 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
HMGB1P16-201ENST00000447155 GPR37O15354 613 aa9.29□□□□□ -0.92
HMGB1P16-201ENST00000447155 KRI1Q8N9T8 703 aaKnown RBP9.29□□□□□ -0.92
HMGB1P16-201ENST00000447155 AK7Q96M32 723 aa9.29□□□□□ -0.92
HMGB1P16-201ENST00000447155 PCDHGA4Q9Y5G9 962 aa9.28□□□□□ -0.92
HMGB1P16-201ENST00000447155 POTEJP0CG39 1038 aa9.27□□□□□ -0.93
HMGB1P16-201ENST00000447155 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
HMGB1P16-201ENST00000447155 TMEM132AQ24JP5 1023 aa9.26□□□□□ -0.93
HMGB1P16-201ENST00000447155 MAMSTRQ6ZN01 415 aa9.26□□□□□ -0.93
HMGB1P16-201ENST00000447155 POTEB2H3BUK9 544 aa9.25□□□□□ -0.93
HMGB1P16-201ENST00000447155 PHF14O94880 888 aa9.25□□□□□ -0.93
HMGB1P16-201ENST00000447155 EPAS1Q99814 870 aa9.25□□□□□ -0.93
HMGB1P16-201ENST00000447155 FCHSD2O94868 740 aa9.24□□□□□ -0.93
HMGB1P16-201ENST00000447155 DOK7Q18PE1 504 aa9.24□□□□□ -0.93
HMGB1P16-201ENST00000447155 SCUBE2Q9NQ36 999 aa9.24□□□□□ -0.93
HMGB1P16-201ENST00000447155 PRIM1P49642 420 aaKnown RBP9.23□□□□□ -0.93
HMGB1P16-201ENST00000447155 HIC1Q14526 733 aa9.23□□□□□ -0.93
HMGB1P16-201ENST00000447155 SLAIN1Q8ND83 568 aa9.23□□□□□ -0.93
HMGB1P16-201ENST00000447155 MINK1Q8N4C8 1332 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P16-201ENST00000447155 KDM4FA0A1W2PPD8 638 aa9.22□□□□□ -0.93
HMGB1P16-201ENST00000447155 GNPATO15228 680 aa9.22□□□□□ -0.93
HMGB1P16-201ENST00000447155 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
HMGB1P16-201ENST00000447155 EN1Q05925 392 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P16-201ENST00000447155 MAP2K5Q13163 448 aa9.21□□□□□ -0.94
HMGB1P16-201ENST00000447155 TRIM66O15016 1216 aa9.2□□□□□ -0.94
HMGB1P16-201ENST00000447155 HOXB3P14651 431 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P16-201ENST00000447155 TYW1BQ6NUM6 668 aa9.2□□□□□ -0.94
HMGB1P16-201ENST00000447155 JPH4Q96JJ6 628 aa9.2□□□□□ -0.94
HMGB1P16-201ENST00000447155 ZSWIM6Q9HCJ5 1215 aa9.2□□□□□ -0.94
HMGB1P16-201ENST00000447155 PCDHGA10Q9Y5H3 936 aa9.2□□□□□ -0.94
HMGB1P16-201ENST00000447155 MAP3K7O43318 606 aa9.19□□□□□ -0.94
HMGB1P16-201ENST00000447155 PTGDRQ13258 359 aa9.19□□□□□ -0.94
HMGB1P16-201ENST00000447155 FBXW7Q969H0 707 aa9.18□□□□□ -0.94
HMGB1P16-201ENST00000447155 IRF6O14896 467 aa9.17□□□□□ -0.94
HMGB1P16-201ENST00000447155 FOSBP53539 338 aa9.17□□□□□ -0.94
HMGB1P16-201ENST00000447155 PDE4DQ08499 809 aa9.17□□□□□ -0.94
HMGB1P16-201ENST00000447155 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
HMGB1P16-201ENST00000447155 ARSIQ5FYB1 569 aa9.16□□□□□ -0.94
HMGB1P16-201ENST00000447155 CCDC102AQ96A19 550 aa9.16□□□□□ -0.94
HMGB1P16-201ENST00000447155 NUDT7P0C024 238 aa9.15□□□□□ -0.94
HMGB1P16-201ENST00000447155 FECHP22830 423 aa9.15□□□□□ -0.94
HMGB1P16-201ENST00000447155 GPR153Q6NV75 609 aa9.15□□□□□ -0.94
HMGB1P16-201ENST00000447155 ZNF710Q8N1W2 664 aa9.15□□□□□ -0.94
HMGB1P16-201ENST00000447155 CDHR5Q9HBB8 845 aa9.15□□□□□ -0.94
HMGB1P16-201ENST00000447155 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms