RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 PLSCR2Q9NRY7 297 aa15.48■□□□□ 0.07
ATP13A3-204ENST00000446356 TMC2Q8TDI7 906 aa15.45■□□□□ 0.06
ATP13A3-204ENST00000446356 POTEGQ6S5H5 508 aa15.44■□□□□ 0.06
ATP13A3-204ENST00000446356 TMEM92Q6UXU6 159 aa15.37■□□□□ 0.05
ATP13A3-204ENST00000446356 PDE4AP27815 886 aa15.36■□□□□ 0.05
ATP13A3-204ENST00000446356 C2orf72A6NCS6 295 aa15.35■□□□□ 0.05
ATP13A3-204ENST00000446356 LCE2DQ5TA82 110 aaPredicted RBP15.35■□□□□ 0.05
ATP13A3-204ENST00000446356 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
ATP13A3-204ENST00000446356 GPHNQ9NQX3 736 aaPredicted RBP15.34■□□□□ 0.05
ATP13A3-204ENST00000446356 SNPHO15079 494 aa15.32■□□□□ 0.04
ATP13A3-204ENST00000446356 CADPS2Q86UW7 1296 aa15.32■□□□□ 0.04
ATP13A3-204ENST00000446356 CRISPLD2Q9H0B8 497 aa15.32■□□□□ 0.04
ATP13A3-204ENST00000446356 KIF3CO14782 793 aa15.31■□□□□ 0.04
ATP13A3-204ENST00000446356 TSHZ2Q9NRE2 1034 aa15.31■□□□□ 0.04
ATP13A3-204ENST00000446356 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
ATP13A3-204ENST00000446356 NCKAP5LQ9HCH0 1330 aa15.28■□□□□ 0.04
ATP13A3-204ENST00000446356 PCDH10Q9P2E7 1040 aa15.28■□□□□ 0.04
ATP13A3-204ENST00000446356 FOXK1P85037 733 aa15.26■□□□□ 0.03
ATP13A3-204ENST00000446356 FAM163AQ96GL9 167 aaPredicted RBP15.26■□□□□ 0.03
ATP13A3-204ENST00000446356 DDX27Q96GQ7 796 aaKnown RBP15.26■□□□□ 0.03
ATP13A3-204ENST00000446356 DSG2Q14126 1118 aa15.23■□□□□ 0.03
ATP13A3-204ENST00000446356 DOK7Q18PE1 504 aa15.23■□□□□ 0.03
ATP13A3-204ENST00000446356 PPP1R15BQ5SWA1 713 aa15.23■□□□□ 0.03
ATP13A3-204ENST00000446356 PLPP6Q8IY26 295 aa15.22■□□□□ 0.03
ATP13A3-204ENST00000446356 WDR70Q9NW82 654 aa15.22■□□□□ 0.03
ATP13A3-204ENST00000446356 RIMBP2O15034 1052 aa15.21■□□□□ 0.03
ATP13A3-204ENST00000446356 MFSD10Q14728 455 aa15.19■□□□□ 0.02
ATP13A3-204ENST00000446356 ZNF710Q8N1W2 664 aa15.19■□□□□ 0.02
ATP13A3-204ENST00000446356 HOXB3P14651 431 aaPredicted RBP15.13■□□□□ 0.01
ATP13A3-204ENST00000446356 SLC34A2O95436 690 aa15.09■□□□□ 0.01
ATP13A3-204ENST00000446356 ZSWIM6Q9HCJ5 1215 aa15.09■□□□□ 0.01
ATP13A3-204ENST00000446356 VSIG10Q8N0Z9 540 aa15.06■□□□□ 0
ATP13A3-204ENST00000446356 TBC1D12O60347 775 aa15.05■□□□□ -0
ATP13A3-204ENST00000446356 ST18O60284 1047 aa15.04■□□□□ -0
ATP13A3-204ENST00000446356 E2F4Q16254 413 aa15.04■□□□□ -0
ATP13A3-204ENST00000446356 UPF1Q92900 1129 aaKnown RBP eCLIP15.03■□□□□ -0
ATP13A3-204ENST00000446356 PTCD2Q8WV60 388 aaKnown RBP15.02■□□□□ -0
ATP13A3-204ENST00000446356 PCDHGA4Q9Y5G9 962 aa15.01□□□□□ -0.01
ATP13A3-204ENST00000446356 CAMK2BQ13554 666 aa15□□□□□ -0.01
ATP13A3-204ENST00000446356 ZNF316A6NFI3 1004 aaPredicted RBP14.98□□□□□ -0.01
ATP13A3-204ENST00000446356 HOXB1P14653 301 aaPredicted RBP14.98□□□□□ -0.01
ATP13A3-204ENST00000446356 ARSIQ5FYB1 569 aa14.98□□□□□ -0.01
ATP13A3-204ENST00000446356 P3H3Q8IVL6 736 aa14.98□□□□□ -0.01
ATP13A3-204ENST00000446356 OXER1Q8TDS5 423 aa14.98□□□□□ -0.01
ATP13A3-204ENST00000446356 MAP3K9P80192 1104 aa14.96□□□□□ -0.01
ATP13A3-204ENST00000446356 GPR153Q6NV75 609 aa14.96□□□□□ -0.01
ATP13A3-204ENST00000446356 EMILIN3Q9NT22 766 aa14.96□□□□□ -0.01
ATP13A3-204ENST00000446356 SLC24A1O60721 1099 aa14.95□□□□□ -0.02
ATP13A3-204ENST00000446356 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
ATP13A3-204ENST00000446356 EMP3P54852 163 aa14.94□□□□□ -0.02
ATP13A3-204ENST00000446356 CDAN1Q8IWY9 1227 aa14.92□□□□□ -0.02
ATP13A3-204ENST00000446356 NUDT7P0C024 238 aa14.91□□□□□ -0.02
ATP13A3-204ENST00000446356 DPYSL4O14531 572 aa14.9□□□□□ -0.02
ATP13A3-204ENST00000446356 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.023e-7■■■□□ 17.7
ATP13A3-204ENST00000446356 MARVELD3Q96A59 401 aa14.9□□□□□ -0.02
ATP13A3-204ENST00000446356 KCNV2Q8TDN2 545 aa14.88□□□□□ -0.03
ATP13A3-204ENST00000446356 EVI5O60447 810 aa14.85□□□□□ -0.03
ATP13A3-204ENST00000446356 ARIH1Q9Y4X5 557 aaPredicted RBP14.85□□□□□ -0.03
ATP13A3-204ENST00000446356 ERBB3P21860 1342 aa14.85□□□□□ -0.03
ATP13A3-204ENST00000446356 ARHGEF1Q92888 912 aaKnown RBP14.84□□□□□ -0.03
ATP13A3-204ENST00000446356 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
ATP13A3-204ENST00000446356 FAM205CA6NFA0 338 aa14.8□□□□□ -0.04
ATP13A3-204ENST00000446356 PSDA5PKW4 1024 aaPredicted RBP14.79□□□□□ -0.04
ATP13A3-204ENST00000446356 PDIA6Q15084 440 aa14.79□□□□□ -0.04
ATP13A3-204ENST00000446356 LHX6Q9UPM6 363 aa14.79□□□□□ -0.04
ATP13A3-204ENST00000446356 KDM4FA0A1W2PPD8 638 aa14.77□□□□□ -0.05
ATP13A3-204ENST00000446356 VARS2Q5ST30 1063 aaKnown RBP14.77□□□□□ -0.05
ATP13A3-204ENST00000446356 ANO8Q9HCE9 1232 aaPredicted RBP14.75□□□□□ -0.05
ATP13A3-204ENST00000446356 HS3ST6Q96QI5 342 aa14.74□□□□□ -0.05
ATP13A3-204ENST00000446356 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
ATP13A3-204ENST00000446356 ZNF454Q8N9F8 522 aa14.71□□□□□ -0.05
ATP13A3-204ENST00000446356 JPH4Q96JJ6 628 aa14.7□□□□□ -0.06
ATP13A3-204ENST00000446356 PTGER2P43116 358 aa14.66□□□□□ -0.06
ATP13A3-204ENST00000446356 FOSBP53539 338 aa14.66□□□□□ -0.06
ATP13A3-204ENST00000446356 DDX12PQ92771 950 aa14.66□□□□□ -0.06
ATP13A3-204ENST00000446356 PHF14O94880 888 aa14.64□□□□□ -0.07
ATP13A3-204ENST00000446356 EPAS1Q99814 870 aa14.63□□□□□ -0.07
ATP13A3-204ENST00000446356 GRXCR2A6NFK2 248 aa14.62□□□□□ -0.07
ATP13A3-204ENST00000446356 TYW1BQ6NUM6 668 aa14.62□□□□□ -0.07
ATP13A3-204ENST00000446356 ZNF687Q8N1G0 1237 aa14.62□□□□□ -0.07
ATP13A3-204ENST00000446356 FBXW7Q969H0 707 aa14.62□□□□□ -0.07
ATP13A3-204ENST00000446356 ZDHHC16Q969W1 377 aa14.62□□□□□ -0.07
ATP13A3-204ENST00000446356 KCNH8Q96L42 1107 aa14.62□□□□□ -0.07
ATP13A3-204ENST00000446356 POTEB3A0JP26 581 aa14.61□□□□□ -0.07
ATP13A3-204ENST00000446356 POTEBQ6S5H4 581 aa14.61□□□□□ -0.07
ATP13A3-204ENST00000446356 NBR1Q14596 966 aa14.6□□□□□ -0.07
ATP13A3-204ENST00000446356 PCDHGA10Q9Y5H3 936 aa14.6□□□□□ -0.07
ATP13A3-204ENST00000446356 SEMA3EO15041 775 aa14.58□□□□□ -0.08
ATP13A3-204ENST00000446356 PBX2P40425 430 aa14.58□□□□□ -0.08
ATP13A3-204ENST00000446356 SPNS2Q8IVW8 549 aa14.58□□□□□ -0.08
ATP13A3-204ENST00000446356 MMRN1Q13201 1228 aa14.55□□□□□ -0.08
ATP13A3-204ENST00000446356 SMYD5Q6GMV2 418 aa14.55□□□□□ -0.08
ATP13A3-204ENST00000446356 BCL2L12Q9HB09 334 aa14.54□□□□□ -0.08
ATP13A3-204ENST00000446356 TULP1O00294 542 aaPredicted RBP14.53□□□□□ -0.08
ATP13A3-204ENST00000446356 MLLT3P42568 568 aaPredicted RBP14.53□□□□□ -0.08
ATP13A3-204ENST00000446356 PTPREP23469 700 aa14.52□□□□□ -0.09
ATP13A3-204ENST00000446356 RBM33Q96EV2 1170 aaKnown RBP14.52□□□□□ -0.09
ATP13A3-204ENST00000446356 ADAM33Q9BZ11 813 aa14.52□□□□□ -0.09
ATP13A3-204ENST00000446356 ARHGAP33O14559 1287 aa14.51□□□□□ -0.09
ATP13A3-204ENST00000446356 MAP3K7O43318 606 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms