RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 CDC42BPAQ5VT25 1732 aa30.44■■■□□ 2.46
COMMD1-204ENST00000445644 SIGLEC1Q9BZZ2 1709 aa30.44■■■□□ 2.46
COMMD1-204ENST00000445644 ARHGAP5Q13017 1502 aa30.42■■■□□ 2.46
COMMD1-204ENST00000445644 POGZQ7Z3K3 1410 aa30.42■■■□□ 2.46
COMMD1-204ENST00000445644 SCAPERQ9BY12 1400 aa30.42■■■□□ 2.46
COMMD1-204ENST00000445644 ADAMTSL3P82987 1691 aa30.41■■■□□ 2.46
COMMD1-204ENST00000445644 BCORL1Q5H9F3 1711 aa30.4■■■□□ 2.46
COMMD1-204ENST00000445644 ZFYVE16Q7Z3T8 1539 aa30.37■■■□□ 2.45
COMMD1-204ENST00000445644 EFCAB2Q5VUJ9 269 aa30.37■■■□□ 2.45
COMMD1-204ENST00000445644 YEATS2Q9ULM3 1422 aa30.37■■■□□ 2.45
COMMD1-204ENST00000445644 LOC105371045A0A1W2PR82 267 aa30.34■■■□□ 2.45
COMMD1-204ENST00000445644 MAGI2Q86UL8 1455 aa30.32■■■□□ 2.44
COMMD1-204ENST00000445644 ITSN2Q9NZM3 1697 aa30.32■■■□□ 2.44
COMMD1-204ENST00000445644 KDM5CP41229 1560 aa30.32■■■□□ 2.44
COMMD1-204ENST00000445644 ABCC1P33527 1531 aa30.31■■■□□ 2.44
COMMD1-204ENST00000445644 MADDQ8WXG6 1647 aa30.29■■■□□ 2.44
COMMD1-204ENST00000445644 ARHGEF12Q9NZN5 1544 aa30.27■■■□□ 2.44
COMMD1-204ENST00000445644 ZNF518AQ6AHZ1 1483 aa30.27■■■□□ 2.44
COMMD1-204ENST00000445644 SAMD9LQ8IVG5 1584 aa30.24■■■□□ 2.43
COMMD1-204ENST00000445644 GPATCH8Q9UKJ3 1502 aaKnown RBP30.24■■■□□ 2.43
COMMD1-204ENST00000445644 HECW2Q9P2P5 1572 aa30.24■■■□□ 2.43
COMMD1-204ENST00000445644 EHBP1L1Q8N3D4 1523 aa30.21■■■□□ 2.43
COMMD1-204ENST00000445644 RIMS1Q86UR5 1692 aaKnown RBP30.2■■■□□ 2.43
COMMD1-204ENST00000445644 PTPRMP28827 1452 aa30.2■■■□□ 2.43
COMMD1-204ENST00000445644 AFAP1Q8N556 730 aa30.2■■■□□ 2.43
COMMD1-204ENST00000445644 TRAPPC8Q9Y2L5 1435 aa30.2■■■□□ 2.42
COMMD1-204ENST00000445644 ARID4BQ4LE39 1312 aaPredicted RBP30.2■■■□□ 2.42
COMMD1-204ENST00000445644 DIP2CQ9Y2E4 1556 aa30.19■■■□□ 2.42
COMMD1-204ENST00000445644 ABCA6Q8N139 1617 aa30.18■■■□□ 2.42
COMMD1-204ENST00000445644 MTUS2Q5JR59 1369 aa30.18■■■□□ 2.42
COMMD1-204ENST00000445644 TIAM1Q13009 1591 aa30.18■■■□□ 2.42
COMMD1-204ENST00000445644 ATP10AO60312 1499 aa30.17■■■□□ 2.42
COMMD1-204ENST00000445644 C9orf84Q5VXU9 1444 aa30.15■■■□□ 2.42
COMMD1-204ENST00000445644 KIDINS220Q9ULH0 1771 aa30.14■■■□□ 2.42
COMMD1-204ENST00000445644 SYCP2Q9BX26 1530 aa30.14■■■□□ 2.42
COMMD1-204ENST00000445644 MLH3Q9UHC1 1453 aa30.13■■■□□ 2.41
COMMD1-204ENST00000445644 FER1L4A9Z1Z3 1794 aa30.13■■■□□ 2.41
COMMD1-204ENST00000445644 VPS8Q8N3P4 1428 aa30.13■■■□□ 2.41
COMMD1-204ENST00000445644 REREQ9P2R6 1566 aa30.1■■■□□ 2.41
COMMD1-204ENST00000445644 CCNB3Q8WWL7 1395 aa30.09■■■□□ 2.41
COMMD1-204ENST00000445644 SUPT6HQ7KZ85 1726 aaKnown RBP30.07■■■□□ 2.4
COMMD1-204ENST00000445644 ZNF777Q9ULD5 760 aaPredicted RBP30.06■■■□□ 2.4
COMMD1-204ENST00000445644 CFDP1Q9UEE9 299 aaPredicted RBP30.02■■■□□ 2.4
COMMD1-204ENST00000445644 KIAA1107Q9UPP5 1409 aa30.01■■■□□ 2.39
COMMD1-204ENST00000445644 INO80Q9ULG1 1556 aaPredicted RBP30.01■■■□□ 2.39
COMMD1-204ENST00000445644 NCOA2Q15596 1464 aa30■■■□□ 2.39
COMMD1-204ENST00000445644 MLECQ14165 292 aa30■■■□□ 2.39
COMMD1-204ENST00000445644 PLEKHH2Q8IVE3 1493 aa29.99■■■□□ 2.39
COMMD1-204ENST00000445644 HNRNPMP52272 730 aaKnown RBP eCLIP29.99■■■□□ 2.39
COMMD1-204ENST00000445644 MYT1LQ9UL68 1186 aa29.97■■■□□ 2.39
COMMD1-204ENST00000445644 LRRC9Q6ZRR7 1453 aa29.97■■■□□ 2.39
COMMD1-204ENST00000445644 AGLP35573 1532 aa29.96■■■□□ 2.39
COMMD1-204ENST00000445644 ATP7AQ04656 1500 aa29.96■■■□□ 2.39
COMMD1-204ENST00000445644 ZNF644Q9H582 1327 aaPredicted RBP29.96■■■□□ 2.39
COMMD1-204ENST00000445644 MAP3K1Q13233 1512 aa29.94■■■□□ 2.38
COMMD1-204ENST00000445644 MBD5Q9P267 1494 aa29.93■■■□□ 2.38
COMMD1-204ENST00000445644 LMTK3Q96Q04 1460 aa29.9■■■□□ 2.38
COMMD1-204ENST00000445644 PLXNC1O60486 1568 aa29.88■■■□□ 2.37
COMMD1-204ENST00000445644 SPAG9O60271 1321 aaKnown RBP29.88■■■□□ 2.37
COMMD1-204ENST00000445644 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
COMMD1-204ENST00000445644 KANK4Q5T7N3 995 aaPredicted RBP29.86■■■□□ 2.37
COMMD1-204ENST00000445644 ADGBQ8N7X0 1667 aa29.84■■■□□ 2.37
COMMD1-204ENST00000445644 C3P01024 1663 aa29.83■■■□□ 2.37
COMMD1-204ENST00000445644 PLPPR3Q6T4P5 718 aa29.83■■■□□ 2.37
COMMD1-204ENST00000445644 A2MP01023 1474 aa29.78■■■□□ 2.36
COMMD1-204ENST00000445644 PREX1Q8TCU6 1659 aa29.78■■■□□ 2.36
COMMD1-204ENST00000445644 ARHGEF5Q12774 1597 aa29.77■■■□□ 2.36
COMMD1-204ENST00000445644 CCDC141Q6ZP82 1450 aa29.77■■■□□ 2.36
COMMD1-204ENST00000445644 CEBPAP49715 358 aaPredicted RBP29.76■■■□□ 2.35
COMMD1-204ENST00000445644 RTEL1-TNFRSF6BF6WH68 1400 aa29.74■■■□□ 2.35
COMMD1-204ENST00000445644 MROH2AA6NES4 1674 aa29.73■■■□□ 2.35
COMMD1-204ENST00000445644 CLTCQ00610 1675 aaKnown RBP29.7■■■□□ 2.35
COMMD1-204ENST00000445644 MYOM3Q5VTT5 1437 aa29.7■■■□□ 2.34
COMMD1-204ENST00000445644 MIA2Q96PC5 1412 aa29.65■■■□□ 2.34
COMMD1-204ENST00000445644 HSPA2P54652 639 aa29.65■■■□□ 2.34
COMMD1-204ENST00000445644 MAST1Q9Y2H9 1570 aa29.64■■■□□ 2.34
COMMD1-204ENST00000445644 CNTLNQ9NXG0 1405 aa29.64■■■□□ 2.34
COMMD1-204ENST00000445644 SETD1BQ9UPS6 1966 aaKnown RBP29.63■■■□□ 2.33
COMMD1-204ENST00000445644 RSPH4AQ5TD94 716 aa29.61■■■□□ 2.33
COMMD1-204ENST00000445644 DHX29Q7Z478 1369 aaKnown RBP29.61■■■□□ 2.33
COMMD1-204ENST00000445644 PTPN23Q9H3S7 1636 aa29.59■■■□□ 2.33
COMMD1-204ENST00000445644 CROCC2H7BZ55 1655 aa29.59■■■□□ 2.33
COMMD1-204ENST00000445644 ESF1Q9H501 851 aaKnown RBP29.57■■■□□ 2.32
COMMD1-204ENST00000445644 STRCQ7RTU9 1775 aa29.55■■■□□ 2.32
COMMD1-204ENST00000445644 APLP2Q06481 763 aa29.55■■■□□ 2.32
COMMD1-204ENST00000445644 UHRF1BP1Q6BDS2 1440 aa29.54■■■□□ 2.32
COMMD1-204ENST00000445644 ZMYM3Q14202 1370 aa29.54■■■□□ 2.32
COMMD1-204ENST00000445644 GGT6Q6P531 493 aa29.54■■■□□ 2.32
COMMD1-204ENST00000445644 TCOF1Q13428 1488 aaKnown RBP29.49■■■□□ 2.31
COMMD1-204ENST00000445644 NPATQ14207 1427 aa29.49■■■□□ 2.31
COMMD1-204ENST00000445644 FGD6Q6ZV73 1430 aa29.49■■■□□ 2.31
COMMD1-204ENST00000445644 TSPY4P0CV99 314 aa29.49■■■□□ 2.31
COMMD1-204ENST00000445644 TSPY10P0CW01 314 aa29.49■■■□□ 2.31
COMMD1-204ENST00000445644 DNMT1P26358 1616 aaKnown RBP29.48■■■□□ 2.31
COMMD1-204ENST00000445644 RNF17Q9BXT8 1623 aaKnown RBP29.48■■■□□ 2.31
COMMD1-204ENST00000445644 MYO3AQ8NEV4 1616 aa29.47■■■□□ 2.31
COMMD1-204ENST00000445644 EIF2AK4Q9P2K8 1649 aaKnown RBP29.46■■■□□ 2.31
COMMD1-204ENST00000445644 PTPRKQ15262 1439 aa29.45■■■□□ 2.31
COMMD1-204ENST00000445644 ZNF142P52746 1687 aaPredicted RBP29.45■■■□□ 2.31
COMMD1-204ENST00000445644 KIF3BO15066 747 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms