RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.21
LINC00354-202ENST00000440860 C2orf72A6NCS6 295 aa13.76□□□□□ -0.21
LINC00354-202ENST00000440860 TMC2Q8TDI7 906 aa13.76□□□□□ -0.21
LINC00354-202ENST00000440860 HOXB3P14651 431 aaPredicted RBP13.75□□□□□ -0.21
LINC00354-202ENST00000440860 ZNF710Q8N1W2 664 aa13.74□□□□□ -0.21
LINC00354-202ENST00000440860 DOK7Q18PE1 504 aa13.73□□□□□ -0.21
LINC00354-202ENST00000440860 KIF3CO14782 793 aa13.71□□□□□ -0.21
LINC00354-202ENST00000440860 MARVELD3Q96A59 401 aa13.71□□□□□ -0.21
LINC00354-202ENST00000440860 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
LINC00354-202ENST00000440860 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
LINC00354-202ENST00000440860 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
LINC00354-202ENST00000440860 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
LINC00354-202ENST00000440860 EMP3P54852 163 aa13.62□□□□□ -0.23
LINC00354-202ENST00000440860 CFAP44Q96MT7 982 aa13.62□□□□□ -0.23
LINC00354-202ENST00000440860 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
LINC00354-202ENST00000440860 HOXB1P14653 301 aaPredicted RBP13.6□□□□□ -0.23
LINC00354-202ENST00000440860 ARSIQ5FYB1 569 aa13.59□□□□□ -0.23
LINC00354-202ENST00000440860 PLPP6Q8IY26 295 aa13.59□□□□□ -0.23
LINC00354-202ENST00000440860 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
LINC00354-202ENST00000440860 PDE4AP27815 886 aa13.58□□□□□ -0.24
LINC00354-202ENST00000440860 DSG2Q14126 1118 aa13.58□□□□□ -0.24
LINC00354-202ENST00000440860 FOXK1P85037 733 aa13.57□□□□□ -0.24
LINC00354-202ENST00000440860 GPR153Q6NV75 609 aa13.57□□□□□ -0.24
LINC00354-202ENST00000440860 ZSWIM6Q9HCJ5 1215 aa13.57□□□□□ -0.24
LINC00354-202ENST00000440860 CDAN1Q8IWY9 1227 aa13.55□□□□□ -0.24
LINC00354-202ENST00000440860 KHSRPQ92945 711 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00354-202ENST00000440860 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
LINC00354-202ENST00000440860 CRISPLD2Q9H0B8 497 aa13.54□□□□□ -0.24
LINC00354-202ENST00000440860 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
LINC00354-202ENST00000440860 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
LINC00354-202ENST00000440860 ERBB3P21860 1342 aa13.52□□□□□ -0.25
LINC00354-202ENST00000440860 PCDH10Q9P2E7 1040 aa13.51□□□□□ -0.25
LINC00354-202ENST00000440860 HS3ST6Q96QI5 342 aa13.5□□□□□ -0.25
LINC00354-202ENST00000440860 PCDHGA4Q9Y5G9 962 aa13.5□□□□□ -0.25
LINC00354-202ENST00000440860 POTEB3A0JP26 581 aa13.49□□□□□ -0.25
LINC00354-202ENST00000440860 SLC34A2O95436 690 aa13.49□□□□□ -0.25
LINC00354-202ENST00000440860 POTEBQ6S5H4 581 aa13.49□□□□□ -0.25
LINC00354-202ENST00000440860 PPP1R15BQ5SWA1 713 aa13.48□□□□□ -0.25
LINC00354-202ENST00000440860 NUDT7P0C024 238 aa13.46□□□□□ -0.25
LINC00354-202ENST00000440860 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
LINC00354-202ENST00000440860 VARS2Q5ST30 1063 aaKnown RBP13.44□□□□□ -0.26
LINC00354-202ENST00000440860 PTCD2Q8WV60 388 aaKnown RBP13.43□□□□□ -0.26
LINC00354-202ENST00000440860 UPF1Q92900 1129 aaKnown RBP eCLIP13.43□□□□□ -0.26
LINC00354-202ENST00000440860 TBC1D12O60347 775 aa13.42□□□□□ -0.26
LINC00354-202ENST00000440860 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
LINC00354-202ENST00000440860 MFSD10Q14728 455 aa13.38□□□□□ -0.27
LINC00354-202ENST00000440860 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
LINC00354-202ENST00000440860 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
LINC00354-202ENST00000440860 OXER1Q8TDS5 423 aa13.35□□□□□ -0.27
LINC00354-202ENST00000440860 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
LINC00354-202ENST00000440860 ZNF687Q8N1G0 1237 aa13.31□□□□□ -0.28
LINC00354-202ENST00000440860 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
LINC00354-202ENST00000440860 TSHZ2Q9NRE2 1034 aa13.29□□□□□ -0.28
LINC00354-202ENST00000440860 KRTAP3-3Q9BYR6 98 aa13.28□□□□□ -0.28
LINC00354-202ENST00000440860 KRTAP3-2Q9BYR7 98 aa13.28□□□□□ -0.28
LINC00354-202ENST00000440860 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
LINC00354-202ENST00000440860 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
LINC00354-202ENST00000440860 EVI5O60447 810 aa13.24□□□□□ -0.29
LINC00354-202ENST00000440860 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.29
LINC00354-202ENST00000440860 CAMK2BQ13554 666 aa13.2□□□□□ -0.3
LINC00354-202ENST00000440860 AXIN2Q9Y2T1 843 aa13.19□□□□□ -0.3
LINC00354-202ENST00000440860 DPYSL4O14531 572 aa13.18□□□□□ -0.3
LINC00354-202ENST00000440860 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
LINC00354-202ENST00000440860 SPNS2Q8IVW8 549 aa13.18□□□□□ -0.3
LINC00354-202ENST00000440860 ANO8Q9HCE9 1232 aaPredicted RBP13.18□□□□□ -0.3
LINC00354-202ENST00000440860 E2F4Q16254 413 aa13.17□□□□□ -0.3
LINC00354-202ENST00000440860 PPP4R3BQ5MIZ7 849 aa13.17□□□□□ -0.3
LINC00354-202ENST00000440860 ANKRD13DQ6ZTN6 518 aa13.17□□□□□ -0.3
LINC00354-202ENST00000440860 ZNF454Q8N9F8 522 aa13.17□□□□□ -0.3
LINC00354-202ENST00000440860 POTEEQ6S8J3 1075 aa13.15□□□□□ -0.3
LINC00354-202ENST00000440860 ARHGAP33O14559 1287 aa13.11□□□□□ -0.31
LINC00354-202ENST00000440860 PBX2P40425 430 aa13.1□□□□□ -0.31
LINC00354-202ENST00000440860 FOSBP53539 338 aa13.1□□□□□ -0.31
LINC00354-202ENST00000440860 PSEN2P49810 448 aa13.09□□□□□ -0.31
LINC00354-202ENST00000440860 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC00354-202ENST00000440860 MMRN1Q13201 1228 aa13.08□□□□□ -0.32
LINC00354-202ENST00000440860 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
LINC00354-202ENST00000440860 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
LINC00354-202ENST00000440860 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
LINC00354-202ENST00000440860 KCNK17Q96T54 332 aa13.05□□□□□ -0.32
LINC00354-202ENST00000440860 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
LINC00354-202ENST00000440860 PCDHGA10Q9Y5H3 936 aa13.04□□□□□ -0.32
LINC00354-202ENST00000440860 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
LINC00354-202ENST00000440860 DDX12PQ92771 950 aa13.03□□□□□ -0.32
LINC00354-202ENST00000440860 ADAM33Q9BZ11 813 aa13.02□□□□□ -0.33
LINC00354-202ENST00000440860 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
LINC00354-202ENST00000440860 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
LINC00354-202ENST00000440860 PHF14O94880 888 aa13□□□□□ -0.33
LINC00354-202ENST00000440860 PTPREP23469 700 aa13□□□□□ -0.33
LINC00354-202ENST00000440860 PDIA6Q15084 440 aa12.98□□□□□ -0.33
LINC00354-202ENST00000440860 TYW1BQ6NUM6 668 aa12.98□□□□□ -0.33
LINC00354-202ENST00000440860 ADGRD1Q6QNK2 874 aa12.97□□□□□ -0.33
LINC00354-202ENST00000440860 ARIH1Q9Y4X5 557 aaPredicted RBP12.97□□□□□ -0.33
LINC00354-202ENST00000440860 PTGER2P43116 358 aa12.96□□□□□ -0.33
LINC00354-202ENST00000440860 GRXCR2A6NFK2 248 aa12.95□□□□□ -0.34
LINC00354-202ENST00000440860 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
LINC00354-202ENST00000440860 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
LINC00354-202ENST00000440860 EPAS1Q99814 870 aa12.95□□□□□ -0.34
LINC00354-202ENST00000440860 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
LINC00354-202ENST00000440860 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms