RNA–Protein interactions for RNA: ENST00000440192.1

SDCBPP1-201, Transcript of syndecan binding protein pseudogene 1, humanhuman

BASIC

Gene SDCBPP1, Length 890 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP1-201ENST00000440192 EMP3P54852 163 aa9.68□□□□□ -0.86
SDCBPP1-201ENST00000440192 CDAN1Q8IWY9 1227 aa9.67□□□□□ -0.86
SDCBPP1-201ENST00000440192 TMEM92Q6UXU6 159 aa9.66□□□□□ -0.86
SDCBPP1-201ENST00000440192 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
SDCBPP1-201ENST00000440192 TMC2Q8TDI7 906 aa9.62□□□□□ -0.87
SDCBPP1-201ENST00000440192 RYDENQ9NUL5 291 aaKnown RBP9.62□□□□□ -0.87
SDCBPP1-201ENST00000440192 FAM205CA6NFA0 338 aa9.6□□□□□ -0.87
SDCBPP1-201ENST00000440192 PPP1R37O75864 691 aa9.6□□□□□ -0.87
SDCBPP1-201ENST00000440192 HOXB1P14653 301 aaPredicted RBP9.59□□□□□ -0.87
SDCBPP1-201ENST00000440192 C2orf72A6NCS6 295 aa9.58□□□□□ -0.88
SDCBPP1-201ENST00000440192 ZSWIM6Q9HCJ5 1215 aa9.58□□□□□ -0.88
SDCBPP1-201ENST00000440192 ERBB3P21860 1342 aa9.56□□□□□ -0.88
SDCBPP1-201ENST00000440192 HS3ST6Q96QI5 342 aa9.56□□□□□ -0.88
SDCBPP1-201ENST00000440192 DNAJC5Q9H3Z4 198 aa9.56□□□□□ -0.88
SDCBPP1-201ENST00000440192 KIF3CO14782 793 aa9.54□□□□□ -0.88
SDCBPP1-201ENST00000440192 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
SDCBPP1-201ENST00000440192 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
SDCBPP1-201ENST00000440192 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
SDCBPP1-201ENST00000440192 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
SDCBPP1-201ENST00000440192 POTEB3A0JP26 581 aa9.47□□□□□ -0.89
SDCBPP1-201ENST00000440192 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
SDCBPP1-201ENST00000440192 POTEBQ6S5H4 581 aa9.47□□□□□ -0.89
SDCBPP1-201ENST00000440192 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.9
SDCBPP1-201ENST00000440192 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.9
SDCBPP1-201ENST00000440192 GTPBP6O43824 516 aaPredicted RBP9.44□□□□□ -0.9
SDCBPP1-201ENST00000440192 SLC34A2O95436 690 aa9.44□□□□□ -0.9
SDCBPP1-201ENST00000440192 FOXK1P85037 733 aa9.44□□□□□ -0.9
SDCBPP1-201ENST00000440192 PLPP6Q8IY26 295 aa9.44□□□□□ -0.9
SDCBPP1-201ENST00000440192 NUDT7P0C024 238 aa9.43□□□□□ -0.9
SDCBPP1-201ENST00000440192 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
SDCBPP1-201ENST00000440192 ZNF316A6NFI3 1004 aaPredicted RBP9.41□□□□□ -0.9
SDCBPP1-201ENST00000440192 DSG2Q14126 1118 aa9.41□□□□□ -0.9
SDCBPP1-201ENST00000440192 TBC1D12O60347 775 aa9.4□□□□□ -0.9
SDCBPP1-201ENST00000440192 PDE4AP27815 886 aa9.4□□□□□ -0.9
SDCBPP1-201ENST00000440192 SPNS2Q8IVW8 549 aa9.4□□□□□ -0.9
SDCBPP1-201ENST00000440192 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
SDCBPP1-201ENST00000440192 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
SDCBPP1-201ENST00000440192 ZNF687Q8N1G0 1237 aa9.39□□□□□ -0.91
SDCBPP1-201ENST00000440192 BBXQ8WY36 941 aaPredicted RBP9.37□□□□□ -0.91
SDCBPP1-201ENST00000440192 PTCD2Q8WV60 388 aaKnown RBP9.36□□□□□ -0.91
SDCBPP1-201ENST00000440192 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
SDCBPP1-201ENST00000440192 LHX6Q9UPM6 363 aa9.36□□□□□ -0.91
SDCBPP1-201ENST00000440192 MMRN1Q13201 1228 aa9.35□□□□□ -0.91
SDCBPP1-201ENST00000440192 PPP1R15BQ5SWA1 713 aa9.35□□□□□ -0.91
SDCBPP1-201ENST00000440192 LARP6Q9BRS8 491 aaKnown RBP9.34□□□□□ -0.91
SDCBPP1-201ENST00000440192 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.34□□□□□ -0.91
SDCBPP1-201ENST00000440192 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
SDCBPP1-201ENST00000440192 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
SDCBPP1-201ENST00000440192 DDX27Q96GQ7 796 aaKnown RBP9.32□□□□□ -0.92
SDCBPP1-201ENST00000440192 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
SDCBPP1-201ENST00000440192 ANKRD13DQ6ZTN6 518 aa9.29□□□□□ -0.92
SDCBPP1-201ENST00000440192 SPRYD3Q8NCJ5 442 aa9.29□□□□□ -0.92
SDCBPP1-201ENST00000440192 PBX2P40425 430 aa9.28□□□□□ -0.92
SDCBPP1-201ENST00000440192 OXER1Q8TDS5 423 aa9.27□□□□□ -0.93
SDCBPP1-201ENST00000440192 PPP4R3BQ5MIZ7 849 aa9.26□□□□□ -0.93
SDCBPP1-201ENST00000440192 LSM11P83369 360 aaKnown RBP eCLIP9.25□□□□□ -0.93
SDCBPP1-201ENST00000440192 MAP3K9P80192 1104 aa9.24□□□□□ -0.93
SDCBPP1-201ENST00000440192 MFSD10Q14728 455 aa9.24□□□□□ -0.93
SDCBPP1-201ENST00000440192 CADPS2Q86UW7 1296 aa9.24□□□□□ -0.93
SDCBPP1-201ENST00000440192 KCNH8Q96L42 1107 aa9.24□□□□□ -0.93
SDCBPP1-201ENST00000440192 CFAP44Q96MT7 982 aa9.24□□□□□ -0.93
SDCBPP1-201ENST00000440192 AXIN2Q9Y2T1 843 aa9.24□□□□□ -0.93
SDCBPP1-201ENST00000440192 KDM4FA0A1W2PPD8 638 aa9.23□□□□□ -0.93
SDCBPP1-201ENST00000440192 PTGER2P43116 358 aa9.23□□□□□ -0.93
SDCBPP1-201ENST00000440192 MYT1LQ9UL68 1186 aa9.23□□□□□ -0.93
SDCBPP1-201ENST00000440192 ARHGAP33O14559 1287 aa9.22□□□□□ -0.93
SDCBPP1-201ENST00000440192 PAXIP1Q6ZW49 1069 aaPredicted RBP9.22□□□□□ -0.93
SDCBPP1-201ENST00000440192 RNF166Q96A37 237 aaPredicted RBP9.21□□□□□ -0.94
SDCBPP1-201ENST00000440192 EVI5O60447 810 aa9.2□□□□□ -0.94
SDCBPP1-201ENST00000440192 ZNF454Q8N9F8 522 aa9.2□□□□□ -0.94
SDCBPP1-201ENST00000440192 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
SDCBPP1-201ENST00000440192 PSEN2P49810 448 aa9.16□□□□□ -0.94
SDCBPP1-201ENST00000440192 KCNK17Q96T54 332 aa9.16□□□□□ -0.94
SDCBPP1-201ENST00000440192 STAC3Q96MF2 364 aa9.15□□□□□ -0.94
SDCBPP1-201ENST00000440192 EMILIN3Q9NT22 766 aa9.15□□□□□ -0.94
SDCBPP1-201ENST00000440192 ADGRD1Q6QNK2 874 aa9.14□□□□□ -0.95
SDCBPP1-201ENST00000440192 WDR70Q9NW82 654 aa9.14□□□□□ -0.95
SDCBPP1-201ENST00000440192 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
SDCBPP1-201ENST00000440192 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
SDCBPP1-201ENST00000440192 FOSBP53539 338 aa9.12□□□□□ -0.95
SDCBPP1-201ENST00000440192 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
SDCBPP1-201ENST00000440192 TK2O00142 265 aa9.11□□□□□ -0.95
SDCBPP1-201ENST00000440192 PTPREP23469 700 aa9.11□□□□□ -0.95
SDCBPP1-201ENST00000440192 ZDHHC16Q969W1 377 aa9.11□□□□□ -0.95
SDCBPP1-201ENST00000440192 BCL2L12Q9HB09 334 aa9.11□□□□□ -0.95
SDCBPP1-201ENST00000440192 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
SDCBPP1-201ENST00000440192 DPYSL4O14531 572 aa9.09□□□□□ -0.95
SDCBPP1-201ENST00000440192 ADAM33Q9BZ11 813 aa9.06□□□□□ -0.96
SDCBPP1-201ENST00000440192 E2F4Q16254 413 aa9.05□□□□□ -0.96
SDCBPP1-201ENST00000440192 TYW1BQ6NUM6 668 aa9.05□□□□□ -0.96
SDCBPP1-201ENST00000440192 FBXW7Q969H0 707 aa9.05□□□□□ -0.96
SDCBPP1-201ENST00000440192 PHF14O94880 888 aa9.04□□□□□ -0.96
SDCBPP1-201ENST00000440192 VPS9D1Q9Y2B5 631 aa9.04□□□□□ -0.96
SDCBPP1-201ENST00000440192 PCDHGA10Q9Y5H3 936 aa9.04□□□□□ -0.96
SDCBPP1-201ENST00000440192 HRO43593 1189 aa9.03□□□□□ -0.96
SDCBPP1-201ENST00000440192 PLCB2Q00722 1185 aa9.02□□□□□ -0.97
SDCBPP1-201ENST00000440192 EPAS1Q99814 870 aa9.02□□□□□ -0.97
SDCBPP1-201ENST00000440192 DDX12PQ92771 950 aa9.01□□□□□ -0.97
SDCBPP1-201ENST00000440192 SLC4A5Q9BY07 1137 aa9.01□□□□□ -0.97
SDCBPP1-201ENST00000440192 GOLGA8CPA6NN73 597 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms