RNA–Protein interactions for RNA: ENST00000440186.5

PTPN12-207, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 1 (best)

Gene PTPN12, Length 159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-207ENST00000440186 SLC24A1O60721 1099 aa6.92□□□□□ -1.3
PTPN12-207ENST00000440186 TMEM92Q6UXU6 159 aa6.92□□□□□ -1.3
PTPN12-207ENST00000440186 CRISPLD2Q9H0B8 497 aa6.91□□□□□ -1.3
PTPN12-207ENST00000440186 OTUD5Q96G74 571 aa6.9□□□□□ -1.3
PTPN12-207ENST00000440186 NCKAP5LQ9HCH0 1330 aa6.9□□□□□ -1.3
PTPN12-207ENST00000440186 C2orf72A6NCS6 295 aa6.89□□□□□ -1.31
PTPN12-207ENST00000440186 KIF3CO14782 793 aa6.89□□□□□ -1.31
PTPN12-207ENST00000440186 TMC2Q8TDI7 906 aa6.89□□□□□ -1.31
PTPN12-207ENST00000440186 SLAIN1Q8ND83 568 aa6.88□□□□□ -1.31
PTPN12-207ENST00000440186 GPHNQ9NQX3 736 aaPredicted RBP6.87□□□□□ -1.31
PTPN12-207ENST00000440186 PDE4AP27815 886 aa6.86□□□□□ -1.31
PTPN12-207ENST00000440186 MFSD10Q14728 455 aa6.86□□□□□ -1.31
PTPN12-207ENST00000440186 LARP6Q9BRS8 491 aaKnown RBP6.85□□□□□ -1.31
PTPN12-207ENST00000440186 FOXK1P85037 733 aa6.84□□□□□ -1.31
PTPN12-207ENST00000440186 DSG2Q14126 1118 aa6.84□□□□□ -1.31
PTPN12-207ENST00000440186 PPP1R15BQ5SWA1 713 aa6.84□□□□□ -1.31
PTPN12-207ENST00000440186 VSIG10Q8N0Z9 540 aa6.84□□□□□ -1.31
PTPN12-207ENST00000440186 DDX27Q96GQ7 796 aaKnown RBP6.84□□□□□ -1.31
PTPN12-207ENST00000440186 KDM2AQ9Y2K7 1162 aa6.83□□□□□ -1.32
PTPN12-207ENST00000440186 PLPP6Q8IY26 295 aa6.82□□□□□ -1.32
PTPN12-207ENST00000440186 WDR70Q9NW82 654 aa6.81□□□□□ -1.32
PTPN12-207ENST00000440186 HOXB3P14651 431 aaPredicted RBP6.78□□□□□ -1.32
PTPN12-207ENST00000440186 CAMK2BQ13554 666 aa6.77□□□□□ -1.33
PTPN12-207ENST00000440186 SNPHO15079 494 aa6.76□□□□□ -1.33
PTPN12-207ENST00000440186 E2F4Q16254 413 aa6.76□□□□□ -1.33
PTPN12-207ENST00000440186 DOK7Q18PE1 504 aa6.76□□□□□ -1.33
PTPN12-207ENST00000440186 KCNV2Q8TDN2 545 aa6.75□□□□□ -1.33
PTPN12-207ENST00000440186 SLC34A2O95436 690 aa6.74□□□□□ -1.33
PTPN12-207ENST00000440186 OXER1Q8TDS5 423 aa6.74□□□□□ -1.33
PTPN12-207ENST00000440186 UPF1Q92900 1129 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTPN12-207ENST00000440186 EMILIN3Q9NT22 766 aa6.74□□□□□ -1.33
PTPN12-207ENST00000440186 RIMBP2O15034 1052 aa6.73□□□□□ -1.33
PTPN12-207ENST00000440186 P3H3Q8IVL6 736 aa6.73□□□□□ -1.33
PTPN12-207ENST00000440186 ZNF710Q8N1W2 664 aa6.72□□□□□ -1.33
PTPN12-207ENST00000440186 PTCD2Q8WV60 388 aaKnown RBP6.72□□□□□ -1.33
PTPN12-207ENST00000440186 ZSWIM6Q9HCJ5 1215 aa6.71□□□□□ -1.34
PTPN12-207ENST00000440186 PCDHGA4Q9Y5G9 962 aa6.71□□□□□ -1.34
PTPN12-207ENST00000440186 DPYSL4O14531 572 aa6.7□□□□□ -1.34
PTPN12-207ENST00000440186 ARIH1Q9Y4X5 557 aaPredicted RBP6.7□□□□□ -1.34
PTPN12-207ENST00000440186 ARSIQ5FYB1 569 aa6.69□□□□□ -1.34
PTPN12-207ENST00000440186 GPR153Q6NV75 609 aa6.69□□□□□ -1.34
PTPN12-207ENST00000440186 ARHGEF1Q92888 912 aaKnown RBP6.69□□□□□ -1.34
PTPN12-207ENST00000440186 ST18O60284 1047 aa6.68□□□□□ -1.34
PTPN12-207ENST00000440186 TBC1D12O60347 775 aa6.68□□□□□ -1.34
PTPN12-207ENST00000440186 MAP3K9P80192 1104 aa6.68□□□□□ -1.34
PTPN12-207ENST00000440186 KHSRPQ92945 711 aaKnown RBP eCLIP6.68□□□□□ -1.347e-8■■■□□ 17.2
PTPN12-207ENST00000440186 FAM163AQ96GL9 167 aaPredicted RBP6.68□□□□□ -1.34
PTPN12-207ENST00000440186 HOXB1P14653 301 aaPredicted RBP6.67□□□□□ -1.34
PTPN12-207ENST00000440186 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
PTPN12-207ENST00000440186 ZNF316A6NFI3 1004 aaPredicted RBP6.66□□□□□ -1.34
PTPN12-207ENST00000440186 EVI5O60447 810 aa6.66□□□□□ -1.34
PTPN12-207ENST00000440186 NUDT7P0C024 238 aa6.66□□□□□ -1.34
PTPN12-207ENST00000440186 PDIA6Q15084 440 aa6.66□□□□□ -1.34
PTPN12-207ENST00000440186 KDM4FA0A1W2PPD8 638 aa6.65□□□□□ -1.34
PTPN12-207ENST00000440186 SPDYE16A6NNV3 312 aaPredicted RBP6.65□□□□□ -1.34
PTPN12-207ENST00000440186 EMP3P54852 163 aa6.63□□□□□ -1.35
PTPN12-207ENST00000440186 MARVELD3Q96A59 401 aa6.63□□□□□ -1.35
PTPN12-207ENST00000440186 ANO8Q9HCE9 1232 aaPredicted RBP6.61□□□□□ -1.35
PTPN12-207ENST00000440186 LHX6Q9UPM6 363 aa6.6□□□□□ -1.35
PTPN12-207ENST00000440186 SEMA3EO15041 775 aa6.59□□□□□ -1.35
PTPN12-207ENST00000440186 PTGER2P43116 358 aa6.59□□□□□ -1.35
PTPN12-207ENST00000440186 NBR1Q14596 966 aa6.59□□□□□ -1.35
PTPN12-207ENST00000440186 ERBB3P21860 1342 aa6.58□□□□□ -1.36
PTPN12-207ENST00000440186 FOSBP53539 338 aa6.58□□□□□ -1.36
PTPN12-207ENST00000440186 DDX12PQ92771 950 aa6.58□□□□□ -1.36
PTPN12-207ENST00000440186 JPH4Q96JJ6 628 aa6.58□□□□□ -1.36
PTPN12-207ENST00000440186 TESPA1A2RU30 521 aaPredicted RBP6.57□□□□□ -1.36
PTPN12-207ENST00000440186 PSDA5PKW4 1024 aaPredicted RBP6.57□□□□□ -1.36
PTPN12-207ENST00000440186 FAM205CA6NFA0 338 aa6.57□□□□□ -1.36
PTPN12-207ENST00000440186 MLLT3P42568 568 aaPredicted RBP6.57□□□□□ -1.36
PTPN12-207ENST00000440186 VARS2Q5ST30 1063 aaKnown RBP6.56□□□□□ -1.36
PTPN12-207ENST00000440186 ZNF454Q8N9F8 522 aa6.56□□□□□ -1.36
PTPN12-207ENST00000440186 POTEB3A0JP26 581 aa6.55□□□□□ -1.36
PTPN12-207ENST00000440186 GRXCR2A6NFK2 248 aa6.55□□□□□ -1.36
PTPN12-207ENST00000440186 PHF14O94880 888 aa6.55□□□□□ -1.36
PTPN12-207ENST00000440186 PPP4R3BQ5MIZ7 849 aa6.55□□□□□ -1.36
PTPN12-207ENST00000440186 POTEBQ6S5H4 581 aa6.55□□□□□ -1.36
PTPN12-207ENST00000440186 HS3ST6Q96QI5 342 aa6.55□□□□□ -1.36
PTPN12-207ENST00000440186 PCDHGA10Q9Y5H3 936 aa6.55□□□□□ -1.36
PTPN12-207ENST00000440186 TYW1BQ6NUM6 668 aa6.54□□□□□ -1.36
PTPN12-207ENST00000440186 BCANQ96GW7 911 aa6.54□□□□□ -1.36
PTPN12-207ENST00000440186 EPAS1Q99814 870 aa6.54□□□□□ -1.36
PTPN12-207ENST00000440186 POTEMA6NI47 508 aa6.53□□□□□ -1.36
PTPN12-207ENST00000440186 PRIM1P49642 420 aaKnown RBP6.53□□□□□ -1.36
PTPN12-207ENST00000440186 POTEGQ6S5H5 508 aa6.53□□□□□ -1.36
PTPN12-207ENST00000440186 FBXW7Q969H0 707 aa6.53□□□□□ -1.36
PTPN12-207ENST00000440186 ZDHHC16Q969W1 377 aa6.53□□□□□ -1.36
PTPN12-207ENST00000440186 OSBPP22059 807 aa6.52□□□□□ -1.37
PTPN12-207ENST00000440186 EN1Q05925 392 aaPredicted RBP6.52□□□□□ -1.37
PTPN12-207ENST00000440186 ADAM33Q9BZ11 813 aa6.52□□□□□ -1.37
PTPN12-207ENST00000440186 SMYD5Q6GMV2 418 aa6.51□□□□□ -1.37
PTPN12-207ENST00000440186 ZNF687Q8N1G0 1237 aa6.5□□□□□ -1.37
PTPN12-207ENST00000440186 RBM33Q96EV2 1170 aaKnown RBP6.5□□□□□ -1.37
PTPN12-207ENST00000440186 BCL2L12Q9HB09 334 aa6.5□□□□□ -1.37
PTPN12-207ENST00000440186 TULP1O00294 542 aaPredicted RBP6.49□□□□□ -1.37
PTPN12-207ENST00000440186 MAP3K7O43318 606 aa6.49□□□□□ -1.37
PTPN12-207ENST00000440186 PBX2P40425 430 aa6.48□□□□□ -1.37
PTPN12-207ENST00000440186 RBM26Q5T8P6 1007 aaKnown RBP6.48□□□□□ -1.37
PTPN12-207ENST00000440186 POTEEQ6S8J3 1075 aa6.48□□□□□ -1.37
PTPN12-207ENST00000440186 KCNK17Q96T54 332 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms