RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 HECW2Q9P2P5 1572 aa16.58■□□□□ 0.24
HMGN1P38-201ENST00000431116 BCORL1Q5H9F3 1711 aa16.57■□□□□ 0.24
HMGN1P38-201ENST00000431116 CLIP1P30622 1438 aa16.57■□□□□ 0.24
HMGN1P38-201ENST00000431116 CASKIN1Q8WXD9 1431 aa16.57■□□□□ 0.24
HMGN1P38-201ENST00000431116 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
HMGN1P38-201ENST00000431116 ZFYVE16Q7Z3T8 1539 aa16.55■□□□□ 0.24
HMGN1P38-201ENST00000431116 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
HMGN1P38-201ENST00000431116 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
HMGN1P38-201ENST00000431116 MADDQ8WXG6 1647 aa16.54■□□□□ 0.24
HMGN1P38-201ENST00000431116 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
HMGN1P38-201ENST00000431116 ARID4BQ4LE39 1312 aaPredicted RBP16.53■□□□□ 0.24
HMGN1P38-201ENST00000431116 ARHGAP5Q13017 1502 aa16.53■□□□□ 0.24
HMGN1P38-201ENST00000431116 SCAPERQ9BY12 1400 aa16.53■□□□□ 0.24
HMGN1P38-201ENST00000431116 SIGLEC1Q9BZZ2 1709 aa16.51■□□□□ 0.23
HMGN1P38-201ENST00000431116 CDC42BPBQ9Y5S2 1711 aa16.51■□□□□ 0.23
HMGN1P38-201ENST00000431116 PTPRMP28827 1452 aa16.51■□□□□ 0.23
HMGN1P38-201ENST00000431116 MAGI2Q86UL8 1455 aa16.51■□□□□ 0.23
HMGN1P38-201ENST00000431116 PREX2Q70Z35 1606 aa16.51■□□□□ 0.23
HMGN1P38-201ENST00000431116 YEATS2Q9ULM3 1422 aa16.51■□□□□ 0.23
HMGN1P38-201ENST00000431116 RIMS1Q86UR5 1692 aaKnown RBP16.5■□□□□ 0.23
HMGN1P38-201ENST00000431116 EFCAB2Q5VUJ9 269 aa16.49■□□□□ 0.23
HMGN1P38-201ENST00000431116 CDC42BPAQ5VT25 1732 aa16.47■□□□□ 0.23
HMGN1P38-201ENST00000431116 ZNF518AQ6AHZ1 1483 aa16.46■□□□□ 0.23
HMGN1P38-201ENST00000431116 KDM5CP41229 1560 aa16.46■□□□□ 0.23
HMGN1P38-201ENST00000431116 FER1L4A9Z1Z3 1794 aa16.44■□□□□ 0.22
HMGN1P38-201ENST00000431116 ITSN2Q9NZM3 1697 aa16.44■□□□□ 0.22
HMGN1P38-201ENST00000431116 ABCC1P33527 1531 aa16.44■□□□□ 0.22
HMGN1P38-201ENST00000431116 MSH5O43196 834 aa16.42■□□□□ 0.22
HMGN1P38-201ENST00000431116 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
HMGN1P38-201ENST00000431116 ATP10AO60312 1499 aa16.42■□□□□ 0.22
HMGN1P38-201ENST00000431116 DIP2CQ9Y2E4 1556 aa16.39■□□□□ 0.21
HMGN1P38-201ENST00000431116 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
HMGN1P38-201ENST00000431116 ABCA6Q8N139 1617 aa16.39■□□□□ 0.21
HMGN1P38-201ENST00000431116 ARHGEF12Q9NZN5 1544 aa16.38■□□□□ 0.21
HMGN1P38-201ENST00000431116 MLECQ14165 292 aa16.37■□□□□ 0.21
HMGN1P38-201ENST00000431116 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
HMGN1P38-201ENST00000431116 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
HMGN1P38-201ENST00000431116 TRAPPC8Q9Y2L5 1435 aa16.36■□□□□ 0.21
HMGN1P38-201ENST00000431116 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
HMGN1P38-201ENST00000431116 LMTK3Q96Q04 1460 aa16.35■□□□□ 0.21
HMGN1P38-201ENST00000431116 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
HMGN1P38-201ENST00000431116 SYCP2Q9BX26 1530 aa16.35■□□□□ 0.21
HMGN1P38-201ENST00000431116 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
HMGN1P38-201ENST00000431116 REREQ9P2R6 1566 aa16.34■□□□□ 0.21
HMGN1P38-201ENST00000431116 MTUS2Q5JR59 1369 aa16.34■□□□□ 0.21
HMGN1P38-201ENST00000431116 EHBP1L1Q8N3D4 1523 aa16.34■□□□□ 0.21
HMGN1P38-201ENST00000431116 KIDINS220Q9ULH0 1771 aa16.33■□□□□ 0.21
HMGN1P38-201ENST00000431116 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
HMGN1P38-201ENST00000431116 CCNB3Q8WWL7 1395 aa16.31■□□□□ 0.2
HMGN1P38-201ENST00000431116 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
HMGN1P38-201ENST00000431116 AGLP35573 1532 aa16.28■□□□□ 0.2
HMGN1P38-201ENST00000431116 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
HMGN1P38-201ENST00000431116 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.2
HMGN1P38-201ENST00000431116 CFDP1Q9UEE9 299 aaPredicted RBP16.27■□□□□ 0.2
HMGN1P38-201ENST00000431116 INO80Q9ULG1 1556 aaPredicted RBP16.26■□□□□ 0.19
HMGN1P38-201ENST00000431116 ATP7AQ04656 1500 aa16.26■□□□□ 0.19
HMGN1P38-201ENST00000431116 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
HMGN1P38-201ENST00000431116 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
HMGN1P38-201ENST00000431116 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.19
HMGN1P38-201ENST00000431116 C3P01024 1663 aa16.23■□□□□ 0.19
HMGN1P38-201ENST00000431116 SPAG9O60271 1321 aaKnown RBP16.22■□□□□ 0.19
HMGN1P38-201ENST00000431116 HSPA2P54652 639 aa16.22■□□□□ 0.19
HMGN1P38-201ENST00000431116 ILDR1Q86SU0 546 aaPredicted RBP16.22■□□□□ 0.19
HMGN1P38-201ENST00000431116 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
HMGN1P38-201ENST00000431116 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
HMGN1P38-201ENST00000431116 CEBPAP49715 358 aaPredicted RBP16.21■□□□□ 0.19
HMGN1P38-201ENST00000431116 NCOA2Q15596 1464 aa16.21■□□□□ 0.19
HMGN1P38-201ENST00000431116 PLXNC1O60486 1568 aa16.21■□□□□ 0.18
HMGN1P38-201ENST00000431116 ADGBQ8N7X0 1667 aa16.2■□□□□ 0.18
HMGN1P38-201ENST00000431116 SETD1BQ9UPS6 1966 aaKnown RBP16.18■□□□□ 0.18
HMGN1P38-201ENST00000431116 ZNF644Q9H582 1327 aaPredicted RBP16.18■□□□□ 0.18
HMGN1P38-201ENST00000431116 ESF1Q9H501 851 aaKnown RBP16.17■□□□□ 0.18
HMGN1P38-201ENST00000431116 MROH2AA6NES4 1674 aa16.17■□□□□ 0.18
HMGN1P38-201ENST00000431116 A2MP01023 1474 aa16.16■□□□□ 0.18
HMGN1P38-201ENST00000431116 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
HMGN1P38-201ENST00000431116 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
HMGN1P38-201ENST00000431116 CNTLNQ9NXG0 1405 aa16.16■□□□□ 0.18
HMGN1P38-201ENST00000431116 UHRF1BP1Q6BDS2 1440 aa16.15■□□□□ 0.18
HMGN1P38-201ENST00000431116 LRRC9Q6ZRR7 1453 aa16.15■□□□□ 0.18
HMGN1P38-201ENST00000431116 CLTCQ00610 1675 aaKnown RBP16.14■□□□□ 0.18
HMGN1P38-201ENST00000431116 CCDC141Q6ZP82 1450 aa16.13■□□□□ 0.17
HMGN1P38-201ENST00000431116 RTEL1-TNFRSF6BF6WH68 1400 aa16.11■□□□□ 0.17
HMGN1P38-201ENST00000431116 STRCQ7RTU9 1775 aa16.1■□□□□ 0.17
HMGN1P38-201ENST00000431116 MAP3K1Q13233 1512 aa16.1■□□□□ 0.17
HMGN1P38-201ENST00000431116 ARHGEF5Q12774 1597 aa16.1■□□□□ 0.17
HMGN1P38-201ENST00000431116 MYO3AQ8NEV4 1616 aa16.06■□□□□ 0.16
HMGN1P38-201ENST00000431116 NPATQ14207 1427 aa16.06■□□□□ 0.16
HMGN1P38-201ENST00000431116 ZMYM3Q14202 1370 aa16.06■□□□□ 0.16
HMGN1P38-201ENST00000431116 GGT6Q6P531 493 aa16.05■□□□□ 0.16
HMGN1P38-201ENST00000431116 KANK4Q5T7N3 995 aaPredicted RBP16.04■□□□□ 0.16
HMGN1P38-201ENST00000431116 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
HMGN1P38-201ENST00000431116 ZNF142P52746 1687 aaPredicted RBP16.04■□□□□ 0.16
HMGN1P38-201ENST00000431116 MYOM3Q5VTT5 1437 aa16.03■□□□□ 0.16
HMGN1P38-201ENST00000431116 DHX29Q7Z478 1369 aaKnown RBP16.03■□□□□ 0.16
HMGN1P38-201ENST00000431116 RSPH4AQ5TD94 716 aa16.03■□□□□ 0.16
HMGN1P38-201ENST00000431116 MAST1Q9Y2H9 1570 aa16.02■□□□□ 0.16
HMGN1P38-201ENST00000431116 PTPRKQ15262 1439 aa16.01■□□□□ 0.15
HMGN1P38-201ENST00000431116 KDM5DQ9BY66 1539 aa16■□□□□ 0.15
HMGN1P38-201ENST00000431116 CAMSAP1Q5T5Y3 1602 aa16■□□□□ 0.15
HMGN1P38-201ENST00000431116 MIA2Q96PC5 1412 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms