RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 SAMD9LQ8IVG5 1584 aa16.63■□□□□ 0.25
HDLBP-216ENST00000428482 AKNAQ7Z591 1439 aa16.62■□□□□ 0.25
HDLBP-216ENST00000428482 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
HDLBP-216ENST00000428482 POGZQ7Z3K3 1410 aa16.62■□□□□ 0.25
HDLBP-216ENST00000428482 PLCH2O75038 1416 aa16.61■□□□□ 0.25
HDLBP-216ENST00000428482 ABCA6Q8N139 1617 aa16.59■□□□□ 0.25
HDLBP-216ENST00000428482 KDM4FA0A1W2PPD8 638 aa16.59■□□□□ 0.25
HDLBP-216ENST00000428482 DENND4BO75064 1496 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-216ENST00000428482 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
HDLBP-216ENST00000428482 KDM5CP41229 1560 aa16.59■□□□□ 0.25
HDLBP-216ENST00000428482 RAPGEF3O95398 923 aa16.58■□□□□ 0.24
HDLBP-216ENST00000428482 YEATS2Q9ULM3 1422 aa16.58■□□□□ 0.24
HDLBP-216ENST00000428482 BCORL1Q5H9F3 1711 aa16.58■□□□□ 0.24
HDLBP-216ENST00000428482 MADDQ8WXG6 1647 aa16.57■□□□□ 0.24
HDLBP-216ENST00000428482 SYCP2Q9BX26 1530 aa16.57■□□□□ 0.24
HDLBP-216ENST00000428482 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
HDLBP-216ENST00000428482 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
HDLBP-216ENST00000428482 HECW2Q9P2P5 1572 aa16.56■□□□□ 0.24
HDLBP-216ENST00000428482 ADAMTSL3P82987 1691 aa16.56■□□□□ 0.24
HDLBP-216ENST00000428482 DIP2CQ9Y2E4 1556 aa16.55■□□□□ 0.24
HDLBP-216ENST00000428482 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
HDLBP-216ENST00000428482 SCAPERQ9BY12 1400 aa16.53■□□□□ 0.24
HDLBP-216ENST00000428482 RIMS1Q86UR5 1692 aaKnown RBP16.53■□□□□ 0.24
HDLBP-216ENST00000428482 PHLDB1Q86UU1 1377 aa16.51■□□□□ 0.23
HDLBP-216ENST00000428482 GPATCH8Q9UKJ3 1502 aaKnown RBP16.51■□□□□ 0.23
HDLBP-216ENST00000428482 KIDINS220Q9ULH0 1771 aa16.51■□□□□ 0.23
HDLBP-216ENST00000428482 FER1L4A9Z1Z3 1794 aa16.49■□□□□ 0.23
HDLBP-216ENST00000428482 INO80Q9ULG1 1556 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-216ENST00000428482 TRAPPC8Q9Y2L5 1435 aa16.49■□□□□ 0.23
HDLBP-216ENST00000428482 ZNF518AQ6AHZ1 1483 aa16.48■□□□□ 0.23
HDLBP-216ENST00000428482 MTUS2Q5JR59 1369 aa16.48■□□□□ 0.23
HDLBP-216ENST00000428482 CDK11AQ9UQ88 783 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-216ENST00000428482 NCOA2Q15596 1464 aa16.47■□□□□ 0.23
HDLBP-216ENST00000428482 LRRC9Q6ZRR7 1453 aa16.44■□□□□ 0.22
HDLBP-216ENST00000428482 ADGBQ8N7X0 1667 aa16.43■□□□□ 0.22
HDLBP-216ENST00000428482 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
HDLBP-216ENST00000428482 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
HDLBP-216ENST00000428482 REREQ9P2R6 1566 aa16.41■□□□□ 0.22
HDLBP-216ENST00000428482 MAGI2Q86UL8 1455 aa16.41■□□□□ 0.22
HDLBP-216ENST00000428482 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
HDLBP-216ENST00000428482 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
HDLBP-216ENST00000428482 PLXNC1O60486 1568 aa16.39■□□□□ 0.21
HDLBP-216ENST00000428482 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
HDLBP-216ENST00000428482 CROCC2H7BZ55 1655 aa16.37■□□□□ 0.21
HDLBP-216ENST00000428482 PTPRMP28827 1452 aa16.37■□□□□ 0.21
HDLBP-216ENST00000428482 MAP3K1Q13233 1512 aa16.37■□□□□ 0.21
HDLBP-216ENST00000428482 MLH3Q9UHC1 1453 aa16.36■□□□□ 0.21
HDLBP-216ENST00000428482 AFAP1Q8N556 730 aa16.36■□□□□ 0.21
HDLBP-216ENST00000428482 ATP10AO60312 1499 aa16.35■□□□□ 0.21
HDLBP-216ENST00000428482 KANK4Q5T7N3 995 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-216ENST00000428482 ZNF777Q9ULD5 760 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-216ENST00000428482 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-216ENST00000428482 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
HDLBP-216ENST00000428482 PLEKHH2Q8IVE3 1493 aa16.32■□□□□ 0.2
HDLBP-216ENST00000428482 C3P01024 1663 aa16.31■□□□□ 0.2
HDLBP-216ENST00000428482 ARHGEF5Q12774 1597 aa16.3■□□□□ 0.2
HDLBP-216ENST00000428482 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
HDLBP-216ENST00000428482 ARID4BQ4LE39 1312 aaPredicted RBP16.3■□□□□ 0.2
HDLBP-216ENST00000428482 KIAA1107Q9UPP5 1409 aa16.29■□□□□ 0.2
HDLBP-216ENST00000428482 PTPN23Q9H3S7 1636 aa16.29■□□□□ 0.2
HDLBP-216ENST00000428482 AGLP35573 1532 aa16.29■□□□□ 0.2
HDLBP-216ENST00000428482 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.24e-7■■■■■ 30
HDLBP-216ENST00000428482 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
HDLBP-216ENST00000428482 CLTCQ00610 1675 aaKnown RBP16.27■□□□□ 0.2
HDLBP-216ENST00000428482 MLECQ14165 292 aa16.27■□□□□ 0.2
HDLBP-216ENST00000428482 MYOM3Q5VTT5 1437 aa16.27■□□□□ 0.19
HDLBP-216ENST00000428482 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
HDLBP-216ENST00000428482 LMTK3Q96Q04 1460 aa16.25■□□□□ 0.19
HDLBP-216ENST00000428482 PREX1Q8TCU6 1659 aa16.24■□□□□ 0.19
HDLBP-216ENST00000428482 A2MP01023 1474 aa16.23■□□□□ 0.19
HDLBP-216ENST00000428482 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
HDLBP-216ENST00000428482 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
HDLBP-216ENST00000428482 SPAG9O60271 1321 aaKnown RBP16.21■□□□□ 0.19
HDLBP-216ENST00000428482 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
HDLBP-216ENST00000428482 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
HDLBP-216ENST00000428482 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
HDLBP-216ENST00000428482 FGD6Q6ZV73 1430 aa16.19■□□□□ 0.18
HDLBP-216ENST00000428482 TCOF1Q13428 1488 aaKnown RBP16.18■□□□□ 0.18
HDLBP-216ENST00000428482 CEP152O94986 1710 aa16.18■□□□□ 0.18
HDLBP-216ENST00000428482 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
HDLBP-216ENST00000428482 MYO3AQ8NEV4 1616 aa16.17■□□□□ 0.18
HDLBP-216ENST00000428482 MIA2Q96PC5 1412 aa16.16■□□□□ 0.18
HDLBP-216ENST00000428482 EIF2AK4Q9P2K8 1649 aaKnown RBP16.15■□□□□ 0.18
HDLBP-216ENST00000428482 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
HDLBP-216ENST00000428482 RTEL1-TNFRSF6BF6WH68 1400 aa16.14■□□□□ 0.17
HDLBP-216ENST00000428482 DAPK1P53355 1430 aa16.12■□□□□ 0.17
HDLBP-216ENST00000428482 ZNF142P52746 1687 aaPredicted RBP16.12■□□□□ 0.17
HDLBP-216ENST00000428482 ABCC5O15440 1437 aa16.11■□□□□ 0.17
HDLBP-216ENST00000428482 KDM5DQ9BY66 1539 aa16.11■□□□□ 0.17
HDLBP-216ENST00000428482 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-216ENST00000428482 DEPDC5O75140 1603 aa16.09■□□□□ 0.17
HDLBP-216ENST00000428482 ZC3H13Q5T200 1668 aaKnown RBP16.09■□□□□ 0.17
HDLBP-216ENST00000428482 CAMSAP1Q5T5Y3 1602 aa16.08■□□□□ 0.17
HDLBP-216ENST00000428482 STRCQ7RTU9 1775 aa16.08■□□□□ 0.17
HDLBP-216ENST00000428482 PRDM15P57071 1507 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-216ENST00000428482 ABCC3O15438 1527 aa16.07■□□□□ 0.16
HDLBP-216ENST00000428482 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
HDLBP-216ENST00000428482 DUOX2Q9NRD8 1548 aa16.05■□□□□ 0.16
HDLBP-216ENST00000428482 CNTLNQ9NXG0 1405 aa16.05■□□□□ 0.16
HDLBP-216ENST00000428482 DHX29Q7Z478 1369 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms