RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 DENND4BO75064 1496 aaPredicted RBP26.2■■□□□ 1.78
HLA-DQB2-230ENST00000427449 POGZQ7Z3K3 1410 aa26.17■■□□□ 1.78
HLA-DQB2-230ENST00000427449 KDM5CP41229 1560 aa26.16■■□□□ 1.78
HLA-DQB2-230ENST00000427449 ITSN2Q9NZM3 1697 aa26.15■■□□□ 1.78
HLA-DQB2-230ENST00000427449 CEP162Q5TB80 1403 aa26.14■■□□□ 1.77
HLA-DQB2-230ENST00000427449 ABCC1P33527 1531 aa26.12■■□□□ 1.77
HLA-DQB2-230ENST00000427449 YEATS2Q9ULM3 1422 aa26.12■■□□□ 1.77
HLA-DQB2-230ENST00000427449 MADDQ8WXG6 1647 aa26.11■■□□□ 1.77
HLA-DQB2-230ENST00000427449 ZFYVE16Q7Z3T8 1539 aa26.11■■□□□ 1.77
HLA-DQB2-230ENST00000427449 ARHGAP5Q13017 1502 aa26.09■■□□□ 1.77
HLA-DQB2-230ENST00000427449 ARHGEF12Q9NZN5 1544 aa26.08■■□□□ 1.77
HLA-DQB2-230ENST00000427449 SCAPERQ9BY12 1400 aa26.07■■□□□ 1.76
HLA-DQB2-230ENST00000427449 MAGI2Q86UL8 1455 aa26.07■■□□□ 1.76
HLA-DQB2-230ENST00000427449 ATP1B4Q9UN42 357 aaPredicted RBP26.07■■□□□ 1.76
HLA-DQB2-230ENST00000427449 SAMD9LQ8IVG5 1584 aa26.07■■□□□ 1.76
HLA-DQB2-230ENST00000427449 ABCA6Q8N139 1617 aa26.04■■□□□ 1.76
HLA-DQB2-230ENST00000427449 HECW2Q9P2P5 1572 aa26.03■■□□□ 1.76
HLA-DQB2-230ENST00000427449 DIP2CQ9Y2E4 1556 aa26.03■■□□□ 1.76
HLA-DQB2-230ENST00000427449 CDK11AQ9UQ88 783 aaPredicted RBP26.02■■□□□ 1.76
HLA-DQB2-230ENST00000427449 KIDINS220Q9ULH0 1771 aa26■■□□□ 1.75
HLA-DQB2-230ENST00000427449 RIMS1Q86UR5 1692 aaKnown RBP26■■□□□ 1.75
HLA-DQB2-230ENST00000427449 TIAM1Q13009 1591 aa26■■□□□ 1.75
HLA-DQB2-230ENST00000427449 ZNF518AQ6AHZ1 1483 aa26■■□□□ 1.75
HLA-DQB2-230ENST00000427449 GPATCH8Q9UKJ3 1502 aaKnown RBP25.99■■□□□ 1.75
HLA-DQB2-230ENST00000427449 REREQ9P2R6 1566 aa25.99■■□□□ 1.75
HLA-DQB2-230ENST00000427449 EHBP1L1Q8N3D4 1523 aa25.98■■□□□ 1.75
HLA-DQB2-230ENST00000427449 PTPRMP28827 1452 aa25.98■■□□□ 1.75
HLA-DQB2-230ENST00000427449 FER1L4A9Z1Z3 1794 aa25.96■■□□□ 1.75
HLA-DQB2-230ENST00000427449 EFCAB2Q5VUJ9 269 aa25.94■■□□□ 1.74
HLA-DQB2-230ENST00000427449 TRAPPC8Q9Y2L5 1435 aa25.94■■□□□ 1.74
HLA-DQB2-230ENST00000427449 SYCP2Q9BX26 1530 aa25.92■■□□□ 1.74
HLA-DQB2-230ENST00000427449 MLH3Q9UHC1 1453 aa25.91■■□□□ 1.74
HLA-DQB2-230ENST00000427449 INO80Q9ULG1 1556 aaPredicted RBP25.9■■□□□ 1.74
HLA-DQB2-230ENST00000427449 C9orf84Q5VXU9 1444 aa25.89■■□□□ 1.74
HLA-DQB2-230ENST00000427449 ATP10AO60312 1499 aa25.89■■□□□ 1.73
HLA-DQB2-230ENST00000427449 LOC105371045A0A1W2PR82 267 aa25.87■■□□□ 1.73
HLA-DQB2-230ENST00000427449 VPS8Q8N3P4 1428 aa25.85■■□□□ 1.73
HLA-DQB2-230ENST00000427449 SUPT6HQ7KZ85 1726 aaKnown RBP25.84■■□□□ 1.73
HLA-DQB2-230ENST00000427449 AFAP1Q8N556 730 aa25.83■■□□□ 1.73
HLA-DQB2-230ENST00000427449 AGLP35573 1532 aa25.81■■□□□ 1.72
HLA-DQB2-230ENST00000427449 PLXNC1O60486 1568 aa25.81■■□□□ 1.72
HLA-DQB2-230ENST00000427449 MTUS2Q5JR59 1369 aa25.8■■□□□ 1.72
HLA-DQB2-230ENST00000427449 KIAA1107Q9UPP5 1409 aa25.78■■□□□ 1.72
HLA-DQB2-230ENST00000427449 LMTK3Q96Q04 1460 aa25.78■■□□□ 1.72
HLA-DQB2-230ENST00000427449 ATP7AQ04656 1500 aa25.77■■□□□ 1.72
HLA-DQB2-230ENST00000427449 MAP3K1Q13233 1512 aa25.77■■□□□ 1.72
HLA-DQB2-230ENST00000427449 NCOA2Q15596 1464 aa25.76■■□□□ 1.71
HLA-DQB2-230ENST00000427449 MBD5Q9P267 1494 aa25.76■■□□□ 1.71
HLA-DQB2-230ENST00000427449 ADGBQ8N7X0 1667 aa25.75■■□□□ 1.71
HLA-DQB2-230ENST00000427449 LRRC9Q6ZRR7 1453 aa25.73■■□□□ 1.71
HLA-DQB2-230ENST00000427449 PLEKHH2Q8IVE3 1493 aa25.72■■□□□ 1.71
HLA-DQB2-230ENST00000427449 CCNB3Q8WWL7 1395 aa25.72■■□□□ 1.71
HLA-DQB2-230ENST00000427449 C3P01024 1663 aa25.72■■□□□ 1.71
HLA-DQB2-230ENST00000427449 ARID4BQ4LE39 1312 aaPredicted RBP25.71■■□□□ 1.71
HLA-DQB2-230ENST00000427449 PREX1Q8TCU6 1659 aa25.67■■□□□ 1.7
HLA-DQB2-230ENST00000427449 CAMSAP2Q08AD1 1489 aa25.66■■□□□ 1.7
HLA-DQB2-230ENST00000427449 ZNF644Q9H582 1327 aaPredicted RBP25.65■■□□□ 1.7
HLA-DQB2-230ENST00000427449 MROH2AA6NES4 1674 aa25.65■■□□□ 1.7
HLA-DQB2-230ENST00000427449 ARHGEF5Q12774 1597 aa25.64■■□□□ 1.69
HLA-DQB2-230ENST00000427449 HNRNPMP52272 730 aaKnown RBP eCLIP25.62■■□□□ 1.69
HLA-DQB2-230ENST00000427449 CFDP1Q9UEE9 299 aaPredicted RBP25.62■■□□□ 1.69
HLA-DQB2-230ENST00000427449 ZNF777Q9ULD5 760 aaPredicted RBP25.59■■□□□ 1.69
HLA-DQB2-230ENST00000427449 MLECQ14165 292 aa25.57■■□□□ 1.68
HLA-DQB2-230ENST00000427449 CLTCQ00610 1675 aaKnown RBP25.56■■□□□ 1.68
HLA-DQB2-230ENST00000427449 A2MP01023 1474 aa25.56■■□□□ 1.68
HLA-DQB2-230ENST00000427449 CCDC141Q6ZP82 1450 aa25.56■■□□□ 1.68
HLA-DQB2-230ENST00000427449 KANK4Q5T7N3 995 aaPredicted RBP25.56■■□□□ 1.68
HLA-DQB2-230ENST00000427449 MAST1Q9Y2H9 1570 aa25.55■■□□□ 1.68
HLA-DQB2-230ENST00000427449 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
HLA-DQB2-230ENST00000427449 RTEL1-TNFRSF6BF6WH68 1400 aa25.54■■□□□ 1.68
HLA-DQB2-230ENST00000427449 SPAG9O60271 1321 aaKnown RBP25.54■■□□□ 1.68
HLA-DQB2-230ENST00000427449 STRCQ7RTU9 1775 aa25.52■■□□□ 1.68
HLA-DQB2-230ENST00000427449 SETD1BQ9UPS6 1966 aaKnown RBP25.51■■□□□ 1.67
HLA-DQB2-230ENST00000427449 MYOM3Q5VTT5 1437 aa25.49■■□□□ 1.67
HLA-DQB2-230ENST00000427449 CEBPAP49715 358 aaPredicted RBP25.45■■□□□ 1.66
HLA-DQB2-230ENST00000427449 ZNF142P52746 1687 aaPredicted RBP25.45■■□□□ 1.66
HLA-DQB2-230ENST00000427449 MIA2Q96PC5 1412 aa25.45■■□□□ 1.66
HLA-DQB2-230ENST00000427449 RNF17Q9BXT8 1623 aaKnown RBP25.44■■□□□ 1.66
HLA-DQB2-230ENST00000427449 PTPN23Q9H3S7 1636 aa25.43■■□□□ 1.66
HLA-DQB2-230ENST00000427449 CNTLNQ9NXG0 1405 aa25.43■■□□□ 1.66
HLA-DQB2-230ENST00000427449 MROH1Q8NDA8 1641 aa25.42■■□□□ 1.66
HLA-DQB2-230ENST00000427449 MYO3AQ8NEV4 1616 aa25.41■■□□□ 1.66
HLA-DQB2-230ENST00000427449 DNMT1P26358 1616 aaKnown RBP25.39■■□□□ 1.66
HLA-DQB2-230ENST00000427449 EIF2AK4Q9P2K8 1649 aaKnown RBP25.39■■□□□ 1.66
HLA-DQB2-230ENST00000427449 MYT1LQ9UL68 1186 aa25.39■■□□□ 1.66
HLA-DQB2-230ENST00000427449 HSPA2P54652 639 aa25.38■■□□□ 1.65
HLA-DQB2-230ENST00000427449 TCOF1Q13428 1488 aaKnown RBP25.38■■□□□ 1.65
HLA-DQB2-230ENST00000427449 FAM135AQ9P2D6 1515 aa25.37■■□□□ 1.65
HLA-DQB2-230ENST00000427449 DHX29Q7Z478 1369 aaKnown RBP25.37■■□□□ 1.65
HLA-DQB2-230ENST00000427449 NPATQ14207 1427 aa25.36■■□□□ 1.65
HLA-DQB2-230ENST00000427449 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
HLA-DQB2-230ENST00000427449 SHANK2Q9UPX8 1470 aa25.34■■□□□ 1.65
HLA-DQB2-230ENST00000427449 PTPRKQ15262 1439 aa25.33■■□□□ 1.65
HLA-DQB2-230ENST00000427449 KDM5DQ9BY66 1539 aa25.32■■□□□ 1.64
HLA-DQB2-230ENST00000427449 UHRF1BP1Q6BDS2 1440 aa25.32■■□□□ 1.64
HLA-DQB2-230ENST00000427449 FGD6Q6ZV73 1430 aa25.31■■□□□ 1.64
HLA-DQB2-230ENST00000427449 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
HLA-DQB2-230ENST00000427449 ZMYM3Q14202 1370 aa25.3■■□□□ 1.64
HLA-DQB2-230ENST00000427449 CEP152O94986 1710 aa25.29■■□□□ 1.64
HLA-DQB2-230ENST00000427449 ABCC5O15440 1437 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms