RNA–Protein interactions for RNA: ENST00000424155.6

TMED3-202, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 3 BASIC

Gene TMED3, Length 16,555 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-202ENST00000424155 CASC1Q6TDU7 716 aa8.04□□□□□ -1.12
TMED3-202ENST00000424155 NRDCO43847 1150 aa8.04□□□□□ -1.12
TMED3-202ENST00000424155 SKOR2Q2VWA4 1001 aaPredicted RBP8.03□□□□□ -1.12
TMED3-202ENST00000424155 KIAA1211Q6ZU35 1233 aa8.03□□□□□ -1.12
TMED3-202ENST00000424155 CLGNO14967 610 aa8.02□□□□□ -1.13
TMED3-202ENST00000424155 HOMEZQ8IX15 550 aa8.01□□□□□ -1.13
TMED3-202ENST00000424155 RCAN3Q9UKA8 241 aa8.01□□□□□ -1.13
TMED3-202ENST00000424155 IPO4Q8TEX9 1081 aaKnown RBP8□□□□□ -1.13
TMED3-202ENST00000424155 SIN3AQ96ST3 1273 aa8□□□□□ -1.13
TMED3-202ENST00000424155 CBX1P83916 185 aa7.99□□□□□ -1.13
TMED3-202ENST00000424155 KLHL34Q8N239 644 aa7.99□□□□□ -1.13
TMED3-202ENST00000424155 SETQ01105 290 aaPredicted RBP7.99□□□□□ -1.13
TMED3-202ENST00000424155 VGLL3A8MV65 326 aa7.98□□□□□ -1.13
TMED3-202ENST00000424155 TRAK2O60296 914 aa7.98□□□□□ -1.13
TMED3-202ENST00000424155 BRD2P25440 801 aaKnown RBP7.98□□□□□ -1.13
TMED3-202ENST00000424155 TEX35Q5T0J7 233 aa7.98□□□□□ -1.13
TMED3-202ENST00000424155 CCDC66A2RUB6 948 aa7.98□□□□□ -1.13
TMED3-202ENST00000424155 DDX11L8A8MPP1 907 aa7.97□□□□□ -1.13
TMED3-202ENST00000424155 GTPBP4Q9BZE4 634 aaKnown RBP7.97□□□□□ -1.13
TMED3-202ENST00000424155 KDM2AQ9Y2K7 1162 aa7.97□□□□□ -1.13
TMED3-202ENST00000424155 GOLGA6L4A6NEF3 574 aa7.97□□□□□ -1.13
TMED3-202ENST00000424155 TULP1O00294 542 aaPredicted RBP7.97□□□□□ -1.13
TMED3-202ENST00000424155 CGNQ9P2M7 1197 aaKnown RBP7.97□□□□□ -1.13
TMED3-202ENST00000424155 AEBP1Q8IUX7 1158 aa7.97□□□□□ -1.13
TMED3-202ENST00000424155 PPP4R3BQ5MIZ7 849 aa7.96□□□□□ -1.13
TMED3-202ENST00000424155 P3H3Q8IVL6 736 aa7.96□□□□□ -1.13
TMED3-202ENST00000424155 HSP90B1P14625 803 aaKnown RBP7.96□□□□□ -1.13
TMED3-202ENST00000424155 SYAP1Q96A49 352 aaPredicted RBP7.96□□□□□ -1.14
TMED3-202ENST00000424155 GPS2Q13227 327 aa7.94□□□□□ -1.14
TMED3-202ENST00000424155 TIGD1Q96MW7 591 aa7.94□□□□□ -1.14
TMED3-202ENST00000424155 GTF2A1P52655 376 aaPredicted RBP7.94□□□□□ -1.14
TMED3-202ENST00000424155 FAM161AQ3B820 660 aa7.94□□□□□ -1.14
TMED3-202ENST00000424155 SMAP1Q8IYB5 467 aaPredicted RBP7.94□□□□□ -1.14
TMED3-202ENST00000424155 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
TMED3-202ENST00000424155 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
TMED3-202ENST00000424155 GPATCH11Q8N954 259 aa7.93□□□□□ -1.14
TMED3-202ENST00000424155 UQCRHLA0A096LP55 91 aa7.93□□□□□ -1.14
TMED3-202ENST00000424155 UQCRHP07919 91 aa7.93□□□□□ -1.14
TMED3-202ENST00000424155 NASPP49321 788 aaPredicted RBP7.93□□□□□ -1.14
TMED3-202ENST00000424155 CC2D1BQ5T0F9 858 aaKnown RBP7.93□□□□□ -1.14
TMED3-202ENST00000424155 DIAPH3Q9NSV4 1193 aa7.93□□□□□ -1.14
TMED3-202ENST00000424155 CHMP5Q9NZZ3 219 aa7.92□□□□□ -1.14
TMED3-202ENST00000424155 DNAJC2Q99543 621 aaKnown RBP7.92□□□□□ -1.14
TMED3-202ENST00000424155 CLCN1P35523 988 aa7.92□□□□□ -1.14
TMED3-202ENST00000424155 DDX49Q9Y6V7 483 aaKnown RBP7.92□□□□□ -1.14
TMED3-202ENST00000424155 DEF6Q9H4E7 631 aa7.92□□□□□ -1.14
TMED3-202ENST00000424155 PHF14O94880 888 aa7.92□□□□□ -1.14
TMED3-202ENST00000424155 RWDD1Q9H446 243 aaPredicted RBP7.91□□□□□ -1.14
TMED3-202ENST00000424155 BACH2Q9BYV9 841 aa7.91□□□□□ -1.14
TMED3-202ENST00000424155 AEBP2Q6ZN18 517 aaPredicted RBP7.91□□□□□ -1.14
TMED3-202ENST00000424155 FOXD4L1Q9NU39 408 aa7.91□□□□□ -1.14
TMED3-202ENST00000424155 ZNF526Q8TF50 670 aaPredicted RBP7.91□□□□□ -1.14
TMED3-202ENST00000424155 MFAP1P55081 439 aaKnown RBP7.91□□□□□ -1.14
TMED3-202ENST00000424155 TRERF1Q96PN7 1200 aa7.91□□□□□ -1.14
TMED3-202ENST00000424155 RRAGDQ9NQL2 400 aaPredicted RBP7.91□□□□□ -1.14
TMED3-202ENST00000424155 HMGN5P82970 282 aaKnown RBP7.91□□□□□ -1.14
TMED3-202ENST00000424155 NCBP3Q53F19 620 aaKnown RBP7.91□□□□□ -1.14
TMED3-202ENST00000424155 WASHC2AQ641Q2 1341 aa7.91□□□□□ -1.14
TMED3-202ENST00000424155 NUDCQ9Y266 331 aa7.9□□□□□ -1.14
TMED3-202ENST00000424155 CHIC2Q9UKJ5 165 aa7.9□□□□□ -1.14
TMED3-202ENST00000424155 XRCC6P12956 609 aaKnown RBP eCLIP7.9□□□□□ -1.14
TMED3-202ENST00000424155 HTATSF1O43719 755 aaKnown RBP7.9□□□□□ -1.14
TMED3-202ENST00000424155 LMOD3Q0VAK6 560 aa7.9□□□□□ -1.14
TMED3-202ENST00000424155 SPDYE4A6NLX3 237 aa7.9□□□□□ -1.15
TMED3-202ENST00000424155 BCCIPQ9P287 314 aaKnown RBP eCLIP7.9□□□□□ -1.15
TMED3-202ENST00000424155 AXDND1Q5T1B0 1012 aaPredicted RBP7.9□□□□□ -1.15
TMED3-202ENST00000424155 TSPYL1Q9H0U9 437 aa7.89□□□□□ -1.15
TMED3-202ENST00000424155 DYNC1I1O14576 645 aa7.89□□□□□ -1.15
TMED3-202ENST00000424155 CCDC173Q0VFZ6 552 aa7.89□□□□□ -1.15
TMED3-202ENST00000424155 ZNF592Q92610 1267 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 WASHC2CQ9Y4E1 1318 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 CCDC39Q9UFE4 941 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 HDAC5Q9UQL6 1122 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 KNSTRNQ9Y448 316 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 KIF3AQ9Y496 699 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 ZSCAN30Q86W11 494 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 EXOC6Q8TAG9 804 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 CERS3Q8IU89 383 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 GRPEL1Q9HAV7 217 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 CALCOCO1Q9P1Z2 691 aa7.88□□□□□ -1.15
TMED3-202ENST00000424155 POGKQ9P215 609 aa7.87□□□□□ -1.15
TMED3-202ENST00000424155 LETM1O95202 739 aaPredicted RBP7.87□□□□□ -1.15
TMED3-202ENST00000424155 CWC15Q9P013 229 aaKnown RBP7.87□□□□□ -1.15
TMED3-202ENST00000424155 MCM4P33991 863 aa7.87□□□□□ -1.15
TMED3-202ENST00000424155 NEUROD2Q15784 382 aa7.87□□□□□ -1.15
TMED3-202ENST00000424155 OS9Q13438 667 aaPredicted RBP7.87□□□□□ -1.15
TMED3-202ENST00000424155 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
TMED3-202ENST00000424155 FOXD4L4Q8WXT5 416 aaPredicted RBP7.86□□□□□ -1.15
TMED3-202ENST00000424155 CFAP44Q96MT7 982 aa7.86□□□□□ -1.15
TMED3-202ENST00000424155 CCAR2Q8N163 923 aaKnown RBP7.86□□□□□ -1.15
TMED3-202ENST00000424155 STAC3Q96MF2 364 aa7.86□□□□□ -1.15
TMED3-202ENST00000424155 FAM193AP78312 1265 aa7.86□□□□□ -1.15
TMED3-202ENST00000424155 OFD1O75665 1012 aa7.85□□□□□ -1.15
TMED3-202ENST00000424155 MYO15BQ96JP2 1530 aa7.85□□□□□ -1.15
TMED3-202ENST00000424155 ERICH4A6NGS2 130 aa7.85□□□□□ -1.15
TMED3-202ENST00000424155 KIF20AO95235 890 aa7.85□□□□□ -1.15
TMED3-202ENST00000424155 ARID3CA6NKF2 412 aa7.85□□□□□ -1.15
TMED3-202ENST00000424155 HSPA5P11021 654 aaKnown RBP7.85□□□□□ -1.15
TMED3-202ENST00000424155 DCAF11Q8TEB1 546 aa7.85□□□□□ -1.15
TMED3-202ENST00000424155 IGSF3O75054 1194 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms