RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 PLCH2O75038 1416 aa13.77□□□□□ -0.21
LINC01399-201ENST00000423311 CAMSAP2Q08AD1 1489 aa13.76□□□□□ -0.21
LINC01399-201ENST00000423311 FAM50AQ14320 339 aaKnown RBP13.76□□□□□ -0.21
LINC01399-201ENST00000423311 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
LINC01399-201ENST00000423311 DNMT1P26358 1616 aaKnown RBP13.75□□□□□ -0.21
LINC01399-201ENST00000423311 GLI2P10070 1586 aa13.75□□□□□ -0.21
LINC01399-201ENST00000423311 ARHGAP5Q13017 1502 aa13.74□□□□□ -0.21
LINC01399-201ENST00000423311 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
LINC01399-201ENST00000423311 SAMD9LQ8IVG5 1584 aa13.73□□□□□ -0.21
LINC01399-201ENST00000423311 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
LINC01399-201ENST00000423311 MAP3K4Q9Y6R4 1608 aa13.72□□□□□ -0.21
LINC01399-201ENST00000423311 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
LINC01399-201ENST00000423311 CFAP74Q9C0B2 1584 aa13.72□□□□□ -0.21
LINC01399-201ENST00000423311 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
LINC01399-201ENST00000423311 KIAA1107Q9UPP5 1409 aa13.71□□□□□ -0.22
LINC01399-201ENST00000423311 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
LINC01399-201ENST00000423311 EFCAB2Q5VUJ9 269 aa13.7□□□□□ -0.22
LINC01399-201ENST00000423311 DAPK1P53355 1430 aa13.69□□□□□ -0.22
LINC01399-201ENST00000423311 CD109Q6YHK3 1445 aa13.69□□□□□ -0.22
LINC01399-201ENST00000423311 ADGBQ8N7X0 1667 aa13.69□□□□□ -0.22
LINC01399-201ENST00000423311 FANCAO15360 1455 aa13.68□□□□□ -0.22
LINC01399-201ENST00000423311 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
LINC01399-201ENST00000423311 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
LINC01399-201ENST00000423311 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
LINC01399-201ENST00000423311 KIF13AQ9H1H9 1805 aa13.68□□□□□ -0.22
LINC01399-201ENST00000423311 ABCC1P33527 1531 aa13.68□□□□□ -0.22
LINC01399-201ENST00000423311 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
LINC01399-201ENST00000423311 ABCC5O15440 1437 aa13.67□□□□□ -0.22
LINC01399-201ENST00000423311 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
LINC01399-201ENST00000423311 PTPRKQ15262 1439 aa13.66□□□□□ -0.22
LINC01399-201ENST00000423311 ITGAEP38570 1179 aa13.66□□□□□ -0.22
LINC01399-201ENST00000423311 ROCK1Q13464 1354 aa13.66□□□□□ -0.22
LINC01399-201ENST00000423311 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
LINC01399-201ENST00000423311 CCDC141Q6ZP82 1450 aa13.65□□□□□ -0.22
LINC01399-201ENST00000423311 NEO1Q92859 1461 aa13.65□□□□□ -0.22
LINC01399-201ENST00000423311 GCC2Q8IWJ2 1684 aa13.65□□□□□ -0.22
LINC01399-201ENST00000423311 HFM1A2PYH4 1435 aa13.64□□□□□ -0.23
LINC01399-201ENST00000423311 MAST1Q9Y2H9 1570 aa13.64□□□□□ -0.23
LINC01399-201ENST00000423311 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
LINC01399-201ENST00000423311 HRCP23327 699 aa13.63□□□□□ -0.23
LINC01399-201ENST00000423311 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
LINC01399-201ENST00000423311 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 ARHGEF12Q9NZN5 1544 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 PPRC1Q5VV67 1664 aaKnown RBP13.61□□□□□ -0.23
LINC01399-201ENST00000423311 TSPY4P0CV99 314 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 TSPY10P0CW01 314 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 FAM69CQ0P6D2 419 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 HNRNPMP52272 730 aaKnown RBP eCLIP13.6□□□□□ -0.232e-9■■■■■ 36.1
LINC01399-201ENST00000423311 C9orf84Q5VXU9 1444 aa13.6□□□□□ -0.23
LINC01399-201ENST00000423311 TEX14Q8IWB6 1497 aa13.6□□□□□ -0.23
LINC01399-201ENST00000423311 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
LINC01399-201ENST00000423311 TSPOAP1O95153 1857 aa13.59□□□□□ -0.23
LINC01399-201ENST00000423311 PLXNC1O60486 1568 aa13.59□□□□□ -0.23
LINC01399-201ENST00000423311 NAIPQ13075 1403 aa13.59□□□□□ -0.23
LINC01399-201ENST00000423311 NCOA1Q15788 1441 aa13.59□□□□□ -0.23
LINC01399-201ENST00000423311 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.23
LINC01399-201ENST00000423311 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 SCAPERQ9BY12 1400 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 ZNF518AQ6AHZ1 1483 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 CHIC2Q9UKJ5 165 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 RAB3GAP2Q9H2M9 1393 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
LINC01399-201ENST00000423311 KDM5CP41229 1560 aa13.55□□□□□ -0.24
LINC01399-201ENST00000423311 INO80Q9ULG1 1556 aaPredicted RBP13.55□□□□□ -0.24
LINC01399-201ENST00000423311 RICTORQ6R327 1708 aa13.55□□□□□ -0.24
LINC01399-201ENST00000423311 POGZQ7Z3K3 1410 aa13.54□□□□□ -0.24
LINC01399-201ENST00000423311 RRP7BPQ9NSQ0 103 aa13.53□□□□□ -0.24
LINC01399-201ENST00000423311 DENND4BO75064 1496 aaPredicted RBP13.53□□□□□ -0.24
LINC01399-201ENST00000423311 ATP7AQ04656 1500 aa13.53□□□□□ -0.24
LINC01399-201ENST00000423311 ZFYVE16Q7Z3T8 1539 aa13.53□□□□□ -0.24
LINC01399-201ENST00000423311 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
LINC01399-201ENST00000423311 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
LINC01399-201ENST00000423311 SPAG9O60271 1321 aaKnown RBP13.51□□□□□ -0.25
LINC01399-201ENST00000423311 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 DUOX2Q9NRD8 1548 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 MLH3Q9UHC1 1453 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 AFAP1Q8N556 730 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 KDM6BO15054 1643 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
LINC01399-201ENST00000423311 ZMYM4Q5VZL5 1548 aa13.49□□□□□ -0.25
LINC01399-201ENST00000423311 ERBINQ96RT1 1412 aa13.47□□□□□ -0.25
LINC01399-201ENST00000423311 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
LINC01399-201ENST00000423311 FRMPD1Q5SYB0 1578 aa13.47□□□□□ -0.25
LINC01399-201ENST00000423311 DHX57Q6P158 1386 aaKnown RBP13.46□□□□□ -0.25
LINC01399-201ENST00000423311 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
LINC01399-201ENST00000423311 MAGI2Q86UL8 1455 aa13.46□□□□□ -0.25
LINC01399-201ENST00000423311 EIF2AK4Q9P2K8 1649 aaKnown RBP13.46□□□□□ -0.26
LINC01399-201ENST00000423311 UNC13BO14795 1591 aa13.44□□□□□ -0.26
LINC01399-201ENST00000423311 BCORL1Q5H9F3 1711 aa13.43□□□□□ -0.26
LINC01399-201ENST00000423311 KDM5DQ9BY66 1539 aa13.43□□□□□ -0.26
LINC01399-201ENST00000423311 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
LINC01399-201ENST00000423311 RAPGEF3O95398 923 aa13.42□□□□□ -0.26
LINC01399-201ENST00000423311 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
LINC01399-201ENST00000423311 DHX29Q7Z478 1369 aaKnown RBP13.42□□□□□ -0.26
LINC01399-201ENST00000423311 DEPDC5O75140 1603 aa13.42□□□□□ -0.26
LINC01399-201ENST00000423311 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
LINC01399-201ENST00000423311 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
LINC01399-201ENST00000423311 A2MP01023 1474 aa13.4□□□□□ -0.26
LINC01399-201ENST00000423311 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
LINC01399-201ENST00000423311 REREQ9P2R6 1566 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms