RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 PLCH2O75038 1416 aa13.77□□□□□ -0.21
LINC01399-201ENST00000423311 CAMSAP2Q08AD1 1489 aa13.76□□□□□ -0.21
LINC01399-201ENST00000423311 FAM50AQ14320 339 aaKnown RBP13.76□□□□□ -0.21
LINC01399-201ENST00000423311 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
LINC01399-201ENST00000423311 DNMT1P26358 1616 aaKnown RBP13.75□□□□□ -0.21
LINC01399-201ENST00000423311 GLI2P10070 1586 aa13.75□□□□□ -0.21
LINC01399-201ENST00000423311 ARHGAP5Q13017 1502 aa13.74□□□□□ -0.21
LINC01399-201ENST00000423311 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
LINC01399-201ENST00000423311 SAMD9LQ8IVG5 1584 aa13.73□□□□□ -0.21
LINC01399-201ENST00000423311 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
LINC01399-201ENST00000423311 MAP3K4Q9Y6R4 1608 aa13.72□□□□□ -0.21
LINC01399-201ENST00000423311 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
LINC01399-201ENST00000423311 CFAP74Q9C0B2 1584 aa13.72□□□□□ -0.21
LINC01399-201ENST00000423311 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
LINC01399-201ENST00000423311 KIAA1107Q9UPP5 1409 aa13.71□□□□□ -0.22
LINC01399-201ENST00000423311 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
LINC01399-201ENST00000423311 EFCAB2Q5VUJ9 269 aa13.7□□□□□ -0.22
LINC01399-201ENST00000423311 DAPK1P53355 1430 aa13.69□□□□□ -0.22
LINC01399-201ENST00000423311 CD109Q6YHK3 1445 aa13.69□□□□□ -0.22
LINC01399-201ENST00000423311 ADGBQ8N7X0 1667 aa13.69□□□□□ -0.22
LINC01399-201ENST00000423311 FANCAO15360 1455 aa13.68□□□□□ -0.22
LINC01399-201ENST00000423311 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
LINC01399-201ENST00000423311 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
LINC01399-201ENST00000423311 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
LINC01399-201ENST00000423311 KIF13AQ9H1H9 1805 aa13.68□□□□□ -0.22
LINC01399-201ENST00000423311 ABCC1P33527 1531 aa13.68□□□□□ -0.22
LINC01399-201ENST00000423311 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
LINC01399-201ENST00000423311 ABCC5O15440 1437 aa13.67□□□□□ -0.22
LINC01399-201ENST00000423311 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
LINC01399-201ENST00000423311 PTPRKQ15262 1439 aa13.66□□□□□ -0.22
LINC01399-201ENST00000423311 ITGAEP38570 1179 aa13.66□□□□□ -0.22
LINC01399-201ENST00000423311 ROCK1Q13464 1354 aa13.66□□□□□ -0.22
LINC01399-201ENST00000423311 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
LINC01399-201ENST00000423311 CCDC141Q6ZP82 1450 aa13.65□□□□□ -0.22
LINC01399-201ENST00000423311 NEO1Q92859 1461 aa13.65□□□□□ -0.22
LINC01399-201ENST00000423311 GCC2Q8IWJ2 1684 aa13.65□□□□□ -0.22
LINC01399-201ENST00000423311 HFM1A2PYH4 1435 aa13.64□□□□□ -0.23
LINC01399-201ENST00000423311 MAST1Q9Y2H9 1570 aa13.64□□□□□ -0.23
LINC01399-201ENST00000423311 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
LINC01399-201ENST00000423311 HRCP23327 699 aa13.63□□□□□ -0.23
LINC01399-201ENST00000423311 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
LINC01399-201ENST00000423311 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 ARHGEF12Q9NZN5 1544 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 PPRC1Q5VV67 1664 aaKnown RBP13.61□□□□□ -0.23
LINC01399-201ENST00000423311 TSPY4P0CV99 314 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 TSPY10P0CW01 314 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 FAM69CQ0P6D2 419 aa13.61□□□□□ -0.23
LINC01399-201ENST00000423311 HNRNPMP52272 730 aaKnown RBP eCLIP13.6□□□□□ -0.232e-9■■■■■ 36.1
LINC01399-201ENST00000423311 C9orf84Q5VXU9 1444 aa13.6□□□□□ -0.23
LINC01399-201ENST00000423311 TEX14Q8IWB6 1497 aa13.6□□□□□ -0.23
LINC01399-201ENST00000423311 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
LINC01399-201ENST00000423311 TSPOAP1O95153 1857 aa13.59□□□□□ -0.23
LINC01399-201ENST00000423311 PLXNC1O60486 1568 aa13.59□□□□□ -0.23
LINC01399-201ENST00000423311 NAIPQ13075 1403 aa13.59□□□□□ -0.23
LINC01399-201ENST00000423311 NCOA1Q15788 1441 aa13.59□□□□□ -0.23
LINC01399-201ENST00000423311 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.23
LINC01399-201ENST00000423311 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 SCAPERQ9BY12 1400 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 ZNF518AQ6AHZ1 1483 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 CHIC2Q9UKJ5 165 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 RAB3GAP2Q9H2M9 1393 aa13.57□□□□□ -0.24
LINC01399-201ENST00000423311 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
LINC01399-201ENST00000423311 KDM5CP41229 1560 aa13.55□□□□□ -0.24
LINC01399-201ENST00000423311 INO80Q9ULG1 1556 aaPredicted RBP13.55□□□□□ -0.24
LINC01399-201ENST00000423311 RICTORQ6R327 1708 aa13.55□□□□□ -0.24
LINC01399-201ENST00000423311 POGZQ7Z3K3 1410 aa13.54□□□□□ -0.24
LINC01399-201ENST00000423311 RRP7BPQ9NSQ0 103 aa13.53□□□□□ -0.24
LINC01399-201ENST00000423311 DENND4BO75064 1496 aaPredicted RBP13.53□□□□□ -0.24
LINC01399-201ENST00000423311 ATP7AQ04656 1500 aa13.53□□□□□ -0.24
LINC01399-201ENST00000423311 ZFYVE16Q7Z3T8 1539 aa13.53□□□□□ -0.24
LINC01399-201ENST00000423311 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
LINC01399-201ENST00000423311 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
LINC01399-201ENST00000423311 SPAG9O60271 1321 aaKnown RBP13.51□□□□□ -0.25
LINC01399-201ENST00000423311 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 DUOX2Q9NRD8 1548 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 MLH3Q9UHC1 1453 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 AFAP1Q8N556 730 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 KDM6BO15054 1643 aa13.5□□□□□ -0.25
LINC01399-201ENST00000423311 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
LINC01399-201ENST00000423311 ZMYM4Q5VZL5 1548 aa13.49□□□□□ -0.25
LINC01399-201ENST00000423311 ERBINQ96RT1 1412 aa13.47□□□□□ -0.25
LINC01399-201ENST00000423311 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
LINC01399-201ENST00000423311 FRMPD1Q5SYB0 1578 aa13.47□□□□□ -0.25
LINC01399-201ENST00000423311 DHX57Q6P158 1386 aaKnown RBP13.46□□□□□ -0.25
LINC01399-201ENST00000423311 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
LINC01399-201ENST00000423311 MAGI2Q86UL8 1455 aa13.46□□□□□ -0.25
LINC01399-201ENST00000423311 EIF2AK4Q9P2K8 1649 aaKnown RBP13.46□□□□□ -0.26
LINC01399-201ENST00000423311 UNC13BO14795 1591 aa13.44□□□□□ -0.26
LINC01399-201ENST00000423311 BCORL1Q5H9F3 1711 aa13.43□□□□□ -0.26
LINC01399-201ENST00000423311 KDM5DQ9BY66 1539 aa13.43□□□□□ -0.26
LINC01399-201ENST00000423311 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
LINC01399-201ENST00000423311 RAPGEF3O95398 923 aa13.42□□□□□ -0.26
LINC01399-201ENST00000423311 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
LINC01399-201ENST00000423311 DHX29Q7Z478 1369 aaKnown RBP13.42□□□□□ -0.26
LINC01399-201ENST00000423311 DEPDC5O75140 1603 aa13.42□□□□□ -0.26
LINC01399-201ENST00000423311 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
LINC01399-201ENST00000423311 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
LINC01399-201ENST00000423311 A2MP01023 1474 aa13.4□□□□□ -0.26
LINC01399-201ENST00000423311 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
LINC01399-201ENST00000423311 REREQ9P2R6 1566 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms