RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 GPBP1L1Q9HC44 474 aaPredicted RBP4.63□□□□□ -1.67
CTDSPL-203ENST00000416688 AMOTL2Q9Y2J4 779 aa4.63□□□□□ -1.67
CTDSPL-203ENST00000416688 HAX1O00165 279 aa4.62□□□□□ -1.67
CTDSPL-203ENST00000416688 BARGINQ6ZT62 677 aa4.62□□□□□ -1.67
CTDSPL-203ENST00000416688 MIER1Q8N108 512 aa4.62□□□□□ -1.67
CTDSPL-203ENST00000416688 FAM177A1Q8N128 213 aaPredicted RBP4.62□□□□□ -1.67
CTDSPL-203ENST00000416688 MYT1LQ9UL68 1186 aa4.62□□□□□ -1.67
CTDSPL-203ENST00000416688 TESPA1A2RU30 521 aaPredicted RBP4.61□□□□□ -1.67
CTDSPL-203ENST00000416688 STK25O00506 426 aa4.61□□□□□ -1.67
CTDSPL-203ENST00000416688 PPM1GO15355 546 aaPredicted RBP4.61□□□□□ -1.67
CTDSPL-203ENST00000416688 DHX37Q8IY37 1157 aaKnown RBP4.61□□□□□ -1.67
CTDSPL-203ENST00000416688 BCCIPQ9P287 314 aaKnown RBP eCLIP4.61□□□□□ -1.67
CTDSPL-203ENST00000416688 RIOK3O14730 519 aaKnown RBP4.6□□□□□ -1.67
CTDSPL-203ENST00000416688 PRR29P0C7W0 189 aa4.6□□□□□ -1.67
CTDSPL-203ENST00000416688 CHADLQ6NUI6 762 aa4.6□□□□□ -1.67
CTDSPL-203ENST00000416688 KRI1Q8N9T8 703 aaKnown RBP4.6□□□□□ -1.67
CTDSPL-203ENST00000416688 C19orf67A6NJJ6 358 aa4.59□□□□□ -1.67
CTDSPL-203ENST00000416688 GSE1Q14687 1217 aa4.59□□□□□ -1.67
CTDSPL-203ENST00000416688 ARID4BQ4LE39 1312 aaPredicted RBP4.58□□□□□ -1.68
CTDSPL-203ENST00000416688 VGFO15240 615 aaPredicted RBP4.58□□□□□ -1.68
CTDSPL-203ENST00000416688 NEFLP07196 543 aa4.58□□□□□ -1.68
CTDSPL-203ENST00000416688 CCDC125Q86Z20 511 aa4.58□□□□□ -1.68
CTDSPL-203ENST00000416688 ZNF316A6NFI3 1004 aaPredicted RBP4.57□□□□□ -1.68
CTDSPL-203ENST00000416688 SEMA3EO15041 775 aa4.57□□□□□ -1.68
CTDSPL-203ENST00000416688 RNF25Q96BH1 459 aaPredicted RBP4.57□□□□□ -1.68
CTDSPL-203ENST00000416688 DDRGK1Q96HY6 314 aa4.57□□□□□ -1.68
CTDSPL-203ENST00000416688 PSMD1Q99460 953 aa4.57□□□□□ -1.68
CTDSPL-203ENST00000416688 ACIN1Q9UKV3 1341 aaKnown RBP4.56□□□□□ -1.68
CTDSPL-203ENST00000416688 CLSTN1O94985 981 aa4.56□□□□□ -1.68
CTDSPL-203ENST00000416688 RETREG2Q8NC44 543 aa4.56□□□□□ -1.68
CTDSPL-203ENST00000416688 CLUAP1Q96AJ1 413 aa4.56□□□□□ -1.68
CTDSPL-203ENST00000416688 PPP1R15AO75807 674 aaPredicted RBP4.55□□□□□ -1.68
CTDSPL-203ENST00000416688 NCLP19338 710 aaKnown RBP4.55□□□□□ -1.68
CTDSPL-203ENST00000416688 PDE4DQ08499 809 aa4.55□□□□□ -1.68
CTDSPL-203ENST00000416688 KCNA1Q09470 495 aa4.54□□□□□ -1.68
CTDSPL-203ENST00000416688 E2F4Q16254 413 aa4.54□□□□□ -1.68
CTDSPL-203ENST00000416688 PROSER2Q86WR7 435 aaPredicted RBP4.54□□□□□ -1.68
CTDSPL-203ENST00000416688 CREBZFQ9NS37 354 aa4.54□□□□□ -1.68
CTDSPL-203ENST00000416688 ZNF777Q9ULD5 760 aaPredicted RBP4.54□□□□□ -1.68
CTDSPL-203ENST00000416688 FARP1Q9Y4F1 1045 aaPredicted RBP4.54□□□□□ -1.68
CTDSPL-203ENST00000416688 TRIM66O15016 1216 aa4.53□□□□□ -1.68
CTDSPL-203ENST00000416688 ONECUT3O60422 494 aaPredicted RBP4.53□□□□□ -1.68
CTDSPL-203ENST00000416688 IRF5Q13568 498 aa4.53□□□□□ -1.68
CTDSPL-203ENST00000416688 CCDC27Q2M243 656 aa4.53□□□□□ -1.68
CTDSPL-203ENST00000416688 CC2D2BQ6DHV5 1058 aa4.53□□□□□ -1.68
CTDSPL-203ENST00000416688 CWC22Q9HCG8 908 aaKnown RBP4.53□□□□□ -1.68
CTDSPL-203ENST00000416688 GOPCQ9HD26 462 aa4.53□□□□□ -1.68
CTDSPL-203ENST00000416688 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.53□□□□□ -1.68
CTDSPL-203ENST00000416688 STK24Q9Y6E0 443 aa4.53□□□□□ -1.68
CTDSPL-203ENST00000416688 SGIP1Q9BQI5 828 aa4.52□□□□□ -1.69
CTDSPL-203ENST00000416688 FAM117AQ9C073 453 aa4.52□□□□□ -1.69
CTDSPL-203ENST00000416688 ZNF326Q5BKZ1 582 aaKnown RBP4.51□□□□□ -1.69
CTDSPL-203ENST00000416688 TICAM2Q86XR7 235 aa4.51□□□□□ -1.69
CTDSPL-203ENST00000416688 ANKRD13AQ8IZ07 590 aa4.51□□□□□ -1.69
CTDSPL-203ENST00000416688 GABBR2O75899 941 aa4.5□□□□□ -1.69
CTDSPL-203ENST00000416688 BRD1O95696 1058 aa4.5□□□□□ -1.69
CTDSPL-203ENST00000416688 MNX1P50219 401 aaPredicted RBP4.5□□□□□ -1.69
CTDSPL-203ENST00000416688 CADPS2Q86UW7 1296 aa4.5□□□□□ -1.69
CTDSPL-203ENST00000416688 CERS3Q8IU89 383 aa4.5□□□□□ -1.69
CTDSPL-203ENST00000416688 GPIHBP1Q8IV16 184 aa4.5□□□□□ -1.69
CTDSPL-203ENST00000416688 BCL11BQ9C0K0 894 aaPredicted RBP4.5□□□□□ -1.69
CTDSPL-203ENST00000416688 ZNF592Q92610 1267 aa4.49□□□□□ -1.69
CTDSPL-203ENST00000416688 CD44P16070 742 aaKnown RBP4.48□□□□□ -1.69
CTDSPL-203ENST00000416688 MCM6Q14566 821 aa4.48□□□□□ -1.69
CTDSPL-203ENST00000416688 PCMTD1Q96MG8 357 aaPredicted RBP4.48□□□□□ -1.69
CTDSPL-203ENST00000416688 SPATA32Q96LK8 384 aa4.47□□□□□ -1.69
CTDSPL-203ENST00000416688 PLEKHG3A1L390 1219 aa4.46□□□□□ -1.7
CTDSPL-203ENST00000416688 FNBP4Q8N3X1 1017 aaPredicted RBP4.46□□□□□ -1.7
CTDSPL-203ENST00000416688 DRC1Q96MC2 740 aa4.46□□□□□ -1.7
CTDSPL-203ENST00000416688 PLSCR2Q9NRY7 297 aa4.46□□□□□ -1.7
CTDSPL-203ENST00000416688 ARIH1Q9Y4X5 557 aaPredicted RBP4.46□□□□□ -1.7
CTDSPL-203ENST00000416688 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.45□□□□□ -1.7
CTDSPL-203ENST00000416688 DCAF8Q5TAQ9 597 aa4.45□□□□□ -1.7
CTDSPL-203ENST00000416688 SND1Q7KZF4 910 aaKnown RBP eCLIP4.45□□□□□ -1.7
CTDSPL-203ENST00000416688 ZFP91Q96JP5 570 aaPredicted RBP4.45□□□□□ -1.7
CTDSPL-203ENST00000416688 USTQ9Y2C2 406 aa4.45□□□□□ -1.7
CTDSPL-203ENST00000416688 RBM47A0AV96 593 aaKnown RBP4.44□□□□□ -1.7
CTDSPL-203ENST00000416688 SMARCA5O60264 1052 aaPredicted RBP4.44□□□□□ -1.7
CTDSPL-203ENST00000416688 POTEIP0CG38 1075 aa4.44□□□□□ -1.7
CTDSPL-203ENST00000416688 TSR1Q2NL82 804 aaKnown RBP4.44□□□□□ -1.7
CTDSPL-203ENST00000416688 ZNF579Q8NAF0 562 aaKnown RBP4.44□□□□□ -1.7
CTDSPL-203ENST00000416688 IGSF5Q9NSI5 407 aa4.44□□□□□ -1.7
CTDSPL-203ENST00000416688 CHRM1P11229 460 aaPredicted RBP4.43□□□□□ -1.7
CTDSPL-203ENST00000416688 NOL8Q76FK4 1167 aaKnown RBP4.43□□□□□ -1.7
CTDSPL-203ENST00000416688 WWC1Q8IX03 1113 aa4.43□□□□□ -1.7
CTDSPL-203ENST00000416688 ZNF330Q9Y3S2 320 aaPredicted RBP4.43□□□□□ -1.7
CTDSPL-203ENST00000416688 PLEKHD1A6NEE1 506 aa4.42□□□□□ -1.7
CTDSPL-203ENST00000416688 CSB-PGBD3P0DP91 1061 aa4.42□□□□□ -1.7
CTDSPL-203ENST00000416688 SETQ01105 290 aaPredicted RBP4.42□□□□□ -1.7
CTDSPL-203ENST00000416688 SREK1Q8WXA9 508 aaKnown RBP4.42□□□□□ -1.7
CTDSPL-203ENST00000416688 BCL11AQ9H165 835 aa4.42□□□□□ -1.7
CTDSPL-203ENST00000416688 ZRANB1Q9UGI0 708 aa4.42□□□□□ -1.7
CTDSPL-203ENST00000416688 CADPSQ9ULU8 1353 aa4.41□□□□□ -1.7
CTDSPL-203ENST00000416688 ANKRD62A6NC57 917 aa4.41□□□□□ -1.7
CTDSPL-203ENST00000416688 KDM4AO75164 1064 aa4.41□□□□□ -1.7
CTDSPL-203ENST00000416688 ERCC3P19447 782 aa4.41□□□□□ -1.7
CTDSPL-203ENST00000416688 CLCN6P51797 869 aa4.41□□□□□ -1.7
CTDSPL-203ENST00000416688 RBM26Q5T8P6 1007 aaKnown RBP4.41□□□□□ -1.7
CTDSPL-203ENST00000416688 ZNF526Q8TF50 670 aaPredicted RBP4.41□□□□□ -1.7
CTDSPL-203ENST00000416688 FAM212AQ96EL1 285 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms