RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 HFM1A2PYH4 1435 aa12.42□□□□□ -0.42
HDAC9-207ENST00000413509 CROCC2H7BZ55 1655 aa12.42□□□□□ -0.42
HDAC9-207ENST00000413509 ABCA9Q8IUA7 1624 aa12.41□□□□□ -0.42
HDAC9-207ENST00000413509 ARHGEF5Q12774 1597 aa12.4□□□□□ -0.42
HDAC9-207ENST00000413509 ABCC5O15440 1437 aa12.4□□□□□ -0.42
HDAC9-207ENST00000413509 DAPK1P53355 1430 aa12.4□□□□□ -0.42
HDAC9-207ENST00000413509 ASXL2Q76L83 1435 aa12.4□□□□□ -0.42
HDAC9-207ENST00000413509 SETD5Q9C0A6 1442 aa12.4□□□□□ -0.42
HDAC9-207ENST00000413509 GCC2Q8IWJ2 1684 aa12.4□□□□□ -0.42
HDAC9-207ENST00000413509 SAMD9LQ8IVG5 1584 aa12.39□□□□□ -0.43
HDAC9-207ENST00000413509 CFDP1Q9UEE9 299 aaPredicted RBP12.39□□□□□ -0.43
HDAC9-207ENST00000413509 ROCK1Q13464 1354 aa12.39□□□□□ -0.43
HDAC9-207ENST00000413509 SHANK2Q9UPX8 1470 aa12.39□□□□□ -0.43
HDAC9-207ENST00000413509 PLCH2O75038 1416 aa12.38□□□□□ -0.43
HDAC9-207ENST00000413509 MAPKBP1O60336 1514 aa12.38□□□□□ -0.43
HDAC9-207ENST00000413509 RAB3GAP2Q9H2M9 1393 aa12.38□□□□□ -0.43
HDAC9-207ENST00000413509 ADGRL2O95490 1459 aa12.38□□□□□ -0.43
HDAC9-207ENST00000413509 ZNF644Q9H582 1327 aaPredicted RBP12.37□□□□□ -0.43
HDAC9-207ENST00000413509 NAIPQ13075 1403 aa12.37□□□□□ -0.43
HDAC9-207ENST00000413509 MBD5Q9P267 1494 aa12.37□□□□□ -0.43
HDAC9-207ENST00000413509 ADGBQ8N7X0 1667 aa12.37□□□□□ -0.43
HDAC9-207ENST00000413509 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
HDAC9-207ENST00000413509 PLEKHH2Q8IVE3 1493 aa12.35□□□□□ -0.43
HDAC9-207ENST00000413509 ITGAEP38570 1179 aa12.35□□□□□ -0.43
HDAC9-207ENST00000413509 ARHGAP5Q13017 1502 aa12.35□□□□□ -0.43
HDAC9-207ENST00000413509 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
HDAC9-207ENST00000413509 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
HDAC9-207ENST00000413509 MAST1Q9Y2H9 1570 aa12.34□□□□□ -0.43
HDAC9-207ENST00000413509 ABCC1P33527 1531 aa12.33□□□□□ -0.44
HDAC9-207ENST00000413509 CCDC141Q6ZP82 1450 aa12.32□□□□□ -0.44
HDAC9-207ENST00000413509 CLSPNQ9HAW4 1339 aa12.32□□□□□ -0.44
HDAC9-207ENST00000413509 SYCP2Q9BX26 1530 aa12.32□□□□□ -0.44
HDAC9-207ENST00000413509 CCER1Q8TC90 406 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-207ENST00000413509 GLI2P10070 1586 aa12.3□□□□□ -0.44
HDAC9-207ENST00000413509 NCOA1Q15788 1441 aa12.3□□□□□ -0.44
HDAC9-207ENST00000413509 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
HDAC9-207ENST00000413509 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
HDAC9-207ENST00000413509 ARHGEF12Q9NZN5 1544 aa12.3□□□□□ -0.44
HDAC9-207ENST00000413509 KDM6BO15054 1643 aa12.29□□□□□ -0.44
HDAC9-207ENST00000413509 C9orf84Q5VXU9 1444 aa12.29□□□□□ -0.44
HDAC9-207ENST00000413509 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
HDAC9-207ENST00000413509 PLXNC1O60486 1568 aa12.27□□□□□ -0.44
HDAC9-207ENST00000413509 CFAP74Q9C0B2 1584 aa12.27□□□□□ -0.44
HDAC9-207ENST00000413509 MAP3K4Q9Y6R4 1608 aa12.27□□□□□ -0.44
HDAC9-207ENST00000413509 EFCAB2Q5VUJ9 269 aa12.27□□□□□ -0.45
HDAC9-207ENST00000413509 CYB5RLQ6IPT4 315 aa12.27□□□□□ -0.45
HDAC9-207ENST00000413509 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
HDAC9-207ENST00000413509 FANCAO15360 1455 aa12.27□□□□□ -0.45
HDAC9-207ENST00000413509 ACIN1Q9UKV3 1341 aaKnown RBP12.26□□□□□ -0.45
HDAC9-207ENST00000413509 ANKRD30AQ9BXX3 1397 aa12.26□□□□□ -0.45
HDAC9-207ENST00000413509 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
HDAC9-207ENST00000413509 DIP2BQ9P265 1576 aa12.25□□□□□ -0.45
HDAC9-207ENST00000413509 HNRNPMP52272 730 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC9-207ENST00000413509 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
HDAC9-207ENST00000413509 CD109Q6YHK3 1445 aa12.23□□□□□ -0.45
HDAC9-207ENST00000413509 NEO1Q92859 1461 aa12.22□□□□□ -0.45
HDAC9-207ENST00000413509 TRAPPC8Q9Y2L5 1435 aa12.22□□□□□ -0.45
HDAC9-207ENST00000413509 INO80Q9ULG1 1556 aaPredicted RBP12.22□□□□□ -0.45
HDAC9-207ENST00000413509 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.45
HDAC9-207ENST00000413509 DENND4BO75064 1496 aaPredicted RBP12.21□□□□□ -0.45
HDAC9-207ENST00000413509 RTEL1-TNFRSF6BF6WH68 1400 aa12.21□□□□□ -0.45
HDAC9-207ENST00000413509 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
HDAC9-207ENST00000413509 KDM5DQ9BY66 1539 aa12.21□□□□□ -0.46
HDAC9-207ENST00000413509 ADGRL1O94910 1474 aa12.21□□□□□ -0.46
HDAC9-207ENST00000413509 KIF15Q9NS87 1388 aa12.2□□□□□ -0.46
HDAC9-207ENST00000413509 TSPY4P0CV99 314 aa12.2□□□□□ -0.46
HDAC9-207ENST00000413509 TSPY10P0CW01 314 aa12.2□□□□□ -0.46
HDAC9-207ENST00000413509 KDM5CP41229 1560 aa12.2□□□□□ -0.46
HDAC9-207ENST00000413509 ANKRD50Q9ULJ7 1429 aa12.2□□□□□ -0.46
HDAC9-207ENST00000413509 DUOX2Q9NRD8 1548 aa12.18□□□□□ -0.46
HDAC9-207ENST00000413509 PPRC1Q5VV67 1664 aaKnown RBP12.18□□□□□ -0.46
HDAC9-207ENST00000413509 PZPP20742 1482 aa12.17□□□□□ -0.46
HDAC9-207ENST00000413509 POGZQ7Z3K3 1410 aa12.17□□□□□ -0.46
HDAC9-207ENST00000413509 SCAPERQ9BY12 1400 aa12.17□□□□□ -0.46
HDAC9-207ENST00000413509 UNC13BO14795 1591 aa12.17□□□□□ -0.46
HDAC9-207ENST00000413509 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
HDAC9-207ENST00000413509 KIF13AQ9H1H9 1805 aa12.16□□□□□ -0.46
HDAC9-207ENST00000413509 ZNF518AQ6AHZ1 1483 aa12.16□□□□□ -0.46
HDAC9-207ENST00000413509 ERBINQ96RT1 1412 aa12.16□□□□□ -0.46
HDAC9-207ENST00000413509 MAGI2Q86UL8 1455 aa12.15□□□□□ -0.46
HDAC9-207ENST00000413509 KIDINS220Q9ULH0 1771 aa12.15□□□□□ -0.46
HDAC9-207ENST00000413509 RICTORQ6R327 1708 aa12.14□□□□□ -0.47
HDAC9-207ENST00000413509 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
HDAC9-207ENST00000413509 SPAG9O60271 1321 aaKnown RBP12.12□□□□□ -0.47
HDAC9-207ENST00000413509 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
HDAC9-207ENST00000413509 HECW2Q9P2P5 1572 aa12.12□□□□□ -0.47
HDAC9-207ENST00000413509 EIF2AK4Q9P2K8 1649 aaKnown RBP12.11□□□□□ -0.47
HDAC9-207ENST00000413509 FRMPD1Q5SYB0 1578 aa12.11□□□□□ -0.47
HDAC9-207ENST00000413509 AFAP1Q8N556 730 aa12.11□□□□□ -0.47
HDAC9-207ENST00000413509 MPHOSPH9Q99550 1183 aa12.11□□□□□ -0.47
HDAC9-207ENST00000413509 IQGAP3Q86VI3 1631 aa12.11□□□□□ -0.47
HDAC9-207ENST00000413509 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
HDAC9-207ENST00000413509 TEX14Q8IWB6 1497 aa12.1□□□□□ -0.47
HDAC9-207ENST00000413509 BCORL1Q5H9F3 1711 aa12.1□□□□□ -0.47
HDAC9-207ENST00000413509 FAM69CQ0P6D2 419 aa12.09□□□□□ -0.47
HDAC9-207ENST00000413509 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.48
HDAC9-207ENST00000413509 FAM135AQ9P2D6 1515 aa12.08□□□□□ -0.48
HDAC9-207ENST00000413509 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
HDAC9-207ENST00000413509 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
HDAC9-207ENST00000413509 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms